RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 DDX58O95786 925 aaKnown RBP13.89□□□□□ -0.19
GGA3-205ENST00000578348 NEK4P51957 841 aa13.89□□□□□ -0.19
GGA3-205ENST00000578348 PROSER3Q2NL68 480 aa13.89□□□□□ -0.19
GGA3-205ENST00000578348 CHAMP1Q96JM3 812 aa13.89□□□□□ -0.19
GGA3-205ENST00000578348 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
GGA3-205ENST00000578348 FOXD4L5Q5VV16 416 aaPredicted RBP13.89□□□□□ -0.19
GGA3-205ENST00000578348 FOXD4L4Q8WXT5 416 aaPredicted RBP13.89□□□□□ -0.19
GGA3-205ENST00000578348 HDAC5Q9UQL6 1122 aa13.89□□□□□ -0.19
GGA3-205ENST00000578348 MAP3K2Q9Y2U5 619 aa13.89□□□□□ -0.19
GGA3-205ENST00000578348 PPP1R42Q7Z4L9 355 aa13.88□□□□□ -0.19
GGA3-205ENST00000578348 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
GGA3-205ENST00000578348 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
GGA3-205ENST00000578348 SLC39A6Q13433 755 aa13.88□□□□□ -0.19
GGA3-205ENST00000578348 GPT2Q8TD30 523 aa13.88□□□□□ -0.19
GGA3-205ENST00000578348 RBM27Q9P2N5 1060 aaKnown RBP13.88□□□□□ -0.19
GGA3-205ENST00000578348 AOX1Q06278 1338 aa13.88□□□□□ -0.19
GGA3-205ENST00000578348 NBPF7P0C2Y1 421 aaPredicted RBP13.87□□□□□ -0.19
GGA3-205ENST00000578348 MX1P20591 662 aa13.87□□□□□ -0.19
GGA3-205ENST00000578348 PDIA6Q15084 440 aa13.87□□□□□ -0.19
GGA3-205ENST00000578348 RILPL2Q969X0 211 aa13.87□□□□□ -0.19
GGA3-205ENST00000578348 TMX3Q96JJ7 454 aa13.87□□□□□ -0.19
GGA3-205ENST00000578348 ESYT1Q9BSJ8 1104 aa13.87□□□□□ -0.19
GGA3-205ENST00000578348 STAP2Q9UGK3 403 aa13.87□□□□□ -0.19
GGA3-205ENST00000578348 TRIM6-TRIM34B2RNG4 842 aa13.87□□□□□ -0.19
GGA3-205ENST00000578348 MTX1Q13505 466 aa13.87□□□□□ -0.19
GGA3-205ENST00000578348 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
GGA3-205ENST00000578348 GLI3P10071 1580 aa13.86□□□□□ -0.19
GGA3-205ENST00000578348 PCDH11XQ9BZA7 1347 aa13.86□□□□□ -0.19
GGA3-205ENST00000578348 PCDH11YQ9BZA8 1340 aa13.86□□□□□ -0.19
GGA3-205ENST00000578348 PRIM1P49642 420 aaKnown RBP13.86□□□□□ -0.19
GGA3-205ENST00000578348 HSP90AB4PQ58FF6 505 aa13.86□□□□□ -0.19
GGA3-205ENST00000578348 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
GGA3-205ENST00000578348 LINS1Q8NG48 757 aa13.86□□□□□ -0.19
GGA3-205ENST00000578348 RBSNQ9H1K0 784 aa13.86□□□□□ -0.19
GGA3-205ENST00000578348 ANO2Q9NQ90 1003 aa13.86□□□□□ -0.19
GGA3-205ENST00000578348 SRGAP3O43295 1099 aa13.85□□□□□ -0.19
GGA3-205ENST00000578348 RRP9O43818 475 aaKnown RBP13.85□□□□□ -0.19
GGA3-205ENST00000578348 SNRPA1P09661 255 aaKnown RBP13.85□□□□□ -0.19
GGA3-205ENST00000578348 CABP4P57796 275 aa13.85□□□□□ -0.19
GGA3-205ENST00000578348 TOM1L2Q6ZVM7 507 aa13.85□□□□□ -0.19
GGA3-205ENST00000578348 ZSCAN30Q86W11 494 aa13.85□□□□□ -0.19
GGA3-205ENST00000578348 ZNF496Q96IT1 587 aaPredicted RBP13.85□□□□□ -0.19
GGA3-205ENST00000578348 FMNL2Q96PY5 1086 aa13.85□□□□□ -0.19
GGA3-205ENST00000578348 PALD1Q9ULE6 856 aa13.85□□□□□ -0.19
GGA3-205ENST00000578348 SURF6O75683 361 aaKnown RBP13.85□□□□□ -0.19
GGA3-205ENST00000578348 MCCP23508 829 aa13.85□□□□□ -0.19
GGA3-205ENST00000578348 CARD10Q9BWT7 1032 aa13.85□□□□□ -0.19
GGA3-205ENST00000578348 UTYO14607 1347 aa13.84□□□□□ -0.19
GGA3-205ENST00000578348 ZCRB1Q8TBF4 217 aaKnown RBP13.84□□□□□ -0.19
GGA3-205ENST00000578348 KIF1BPQ96EK5 621 aa13.84□□□□□ -0.19
GGA3-205ENST00000578348 C9orf78Q9NZ63 289 aaPredicted RBP13.84□□□□□ -0.19
GGA3-205ENST00000578348 MSNP26038 577 aaKnown RBP13.84□□□□□ -0.19
GGA3-205ENST00000578348 CHMLP26374 656 aa13.84□□□□□ -0.19
GGA3-205ENST00000578348 LARP1Q6PKG0 1096 aaKnown RBP13.84□□□□□ -0.19
GGA3-205ENST00000578348 NSFL1CQ9UNZ2 370 aaKnown RBP13.84□□□□□ -0.19
GGA3-205ENST00000578348 SHANK3Q9BYB0 1731 aa13.84□□□□□ -0.19
GGA3-205ENST00000578348 PAPPAQ13219 1627 aa13.83□□□□□ -0.19
GGA3-205ENST00000578348 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
GGA3-205ENST00000578348 TMEM63CQ9P1W3 806 aa13.83□□□□□ -0.2
GGA3-205ENST00000578348 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.2
GGA3-205ENST00000578348 SYCE3A1L190 88 aa13.83□□□□□ -0.2
GGA3-205ENST00000578348 GRM8O00222 908 aa13.83□□□□□ -0.2
GGA3-205ENST00000578348 MCM2P49736 904 aa13.83□□□□□ -0.2
GGA3-205ENST00000578348 RIC3Q7Z5B4 369 aa13.83□□□□□ -0.2
GGA3-205ENST00000578348 UNC5CLQ8IV45 518 aa13.83□□□□□ -0.2
GGA3-205ENST00000578348 IL2RBP14784 551 aa13.82□□□□□ -0.2
GGA3-205ENST00000578348 AIMP1Q12904 312 aaKnown RBP13.82□□□□□ -0.2
GGA3-205ENST00000578348 CWF19L2Q2TBE0 894 aaKnown RBP13.82□□□□□ -0.2
GGA3-205ENST00000578348 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
GGA3-205ENST00000578348 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
GGA3-205ENST00000578348 NKX1-1Q15270 411 aaPredicted RBP13.81□□□□□ -0.2
GGA3-205ENST00000578348 XAGE3Q8WTP9 111 aa13.81□□□□□ -0.2
GGA3-205ENST00000578348 UPF3BQ9BZI7 483 aaKnown RBP13.81□□□□□ -0.2
GGA3-205ENST00000578348 IL1RAPL2Q9NP60 686 aa13.81□□□□□ -0.2
GGA3-205ENST00000578348 MYL6BP14649 208 aa13.81□□□□□ -0.2
GGA3-205ENST00000578348 LRP10Q7Z4F1 713 aa13.81□□□□□ -0.2
GGA3-205ENST00000578348 ZMYND15Q9H091 742 aa13.81□□□□□ -0.2
GGA3-205ENST00000578348 BRD1O95696 1058 aa13.8□□□□□ -0.2
GGA3-205ENST00000578348 ANAPC15P60006 121 aa13.8□□□□□ -0.2
GGA3-205ENST00000578348 CUL4AQ13619 759 aa13.8□□□□□ -0.2
GGA3-205ENST00000578348 HSP90AA2PQ14568 343 aaPredicted RBP13.8□□□□□ -0.2
GGA3-205ENST00000578348 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
GGA3-205ENST00000578348 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
GGA3-205ENST00000578348 USP16Q9Y5T5 823 aa13.8□□□□□ -0.2
GGA3-205ENST00000578348 ARFGEF2Q9Y6D5 1785 aa13.8□□□□□ -0.2
GGA3-205ENST00000578348 COPS6Q7L5N1 327 aa13.8□□□□□ -0.2
GGA3-205ENST00000578348 ERC1Q8IUD2 1116 aa13.8□□□□□ -0.2
GGA3-205ENST00000578348 USP42Q9H9J4 1324 aaKnown RBP13.8□□□□□ -0.2
GGA3-205ENST00000578348 IGKV5-2P06315 115 aa13.79□□□□□ -0.2
GGA3-205ENST00000578348 EVA1CP58658 441 aa13.79□□□□□ -0.2
GGA3-205ENST00000578348 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
GGA3-205ENST00000578348 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
GGA3-205ENST00000578348 NUTM1Q86Y26 1132 aa13.79□□□□□ -0.2
GGA3-205ENST00000578348 VSIG10Q8N0Z9 540 aa13.79□□□□□ -0.2
GGA3-205ENST00000578348 SUCLG2Q96I99 432 aa13.79□□□□□ -0.2
GGA3-205ENST00000578348 IL25Q9H293 177 aa13.79□□□□□ -0.2
GGA3-205ENST00000578348 KCPQ6ZWJ8 1503 aa13.79□□□□□ -0.2
GGA3-205ENST00000578348 NEURL1BA8MQ27 555 aa13.79□□□□□ -0.2
GGA3-205ENST00000578348 MBD3O95983 291 aa13.79□□□□□ -0.2
GGA3-205ENST00000578348 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 275.2 ms