RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 MYD88Q99836 296 aa23.23■■□□□ 1.31
PRKCA-203ENST00000578063 HMMRO75330 724 aa23.22■■□□□ 1.31
PRKCA-203ENST00000578063 IGKV5-2P06315 115 aa23.22■■□□□ 1.31
PRKCA-203ENST00000578063 CWF19L2Q2TBE0 894 aaKnown RBP23.22■■□□□ 1.31
PRKCA-203ENST00000578063 GCC1Q96CN9 775 aa23.22■■□□□ 1.31
PRKCA-203ENST00000578063 ZBTB1Q9Y2K1 713 aa23.22■■□□□ 1.31
PRKCA-203ENST00000578063 NUP188Q5SRE5 1749 aa23.22■■□□□ 1.31
PRKCA-203ENST00000578063 NEURL1BA8MQ27 555 aa23.22■■□□□ 1.31
PRKCA-203ENST00000578063 IL6STP40189 918 aaPredicted RBP23.22■■□□□ 1.31
PRKCA-203ENST00000578063 KIF6Q6ZMV9 814 aa23.22■■□□□ 1.31
PRKCA-203ENST00000578063 FAM196AQ6ZSG2 479 aa23.22■■□□□ 1.31
PRKCA-203ENST00000578063 C9orf78Q9NZ63 289 aaPredicted RBP23.22■■□□□ 1.31
PRKCA-203ENST00000578063 RREB1Q92766 1687 aa23.21■■□□□ 1.31
PRKCA-203ENST00000578063 SBF2Q86WG5 1849 aa23.21■■□□□ 1.31
PRKCA-203ENST00000578063 RXRBP28702 533 aa23.21■■□□□ 1.31
PRKCA-203ENST00000578063 ITPK1Q13572 414 aa23.21■■□□□ 1.31
PRKCA-203ENST00000578063 CCDC87Q9NVE4 849 aa23.21■■□□□ 1.31
PRKCA-203ENST00000578063 LRRFIP2Q9Y608 721 aaKnown RBP23.21■■□□□ 1.31
PRKCA-203ENST00000578063 GRM8O00222 908 aa23.2■■□□□ 1.3
PRKCA-203ENST00000578063 BCL11BQ9C0K0 894 aaPredicted RBP23.2■■□□□ 1.3
PRKCA-203ENST00000578063 ZNF330Q9Y3S2 320 aaPredicted RBP23.2■■□□□ 1.3
PRKCA-203ENST00000578063 UTYO14607 1347 aa23.2■■□□□ 1.3
PRKCA-203ENST00000578063 NBPF7P0C2Y1 421 aaPredicted RBP23.19■■□□□ 1.3
PRKCA-203ENST00000578063 PTF1AQ7RTS3 328 aa23.19■■□□□ 1.3
PRKCA-203ENST00000578063 BRWD3Q6RI45 1802 aa23.19■■□□□ 1.3
PRKCA-203ENST00000578063 CRKLP46109 303 aaKnown RBP23.19■■□□□ 1.3
PRKCA-203ENST00000578063 NPM2Q86SE8 214 aaKnown RBP23.19■■□□□ 1.3
PRKCA-203ENST00000578063 COL5A3P25940 1745 aaPredicted RBP23.18■■□□□ 1.3
PRKCA-203ENST00000578063 GCKRQ14397 625 aa23.18■■□□□ 1.3
PRKCA-203ENST00000578063 INTS5Q6P9B9 1019 aaKnown RBP23.18■■□□□ 1.3
PRKCA-203ENST00000578063 ZBTB3Q9H5J0 574 aa23.18■■□□□ 1.3
PRKCA-203ENST00000578063 PDZRN3Q9UPQ7 1066 aa23.18■■□□□ 1.3
PRKCA-203ENST00000578063 MAP3K15Q6ZN16 1313 aa23.17■■□□□ 1.3
PRKCA-203ENST00000578063 ATP8B2P98198 1209 aa23.16■■□□□ 1.3
PRKCA-203ENST00000578063 DCTPP1Q9H773 170 aa23.16■■□□□ 1.3
PRKCA-203ENST00000578063 EIF5P55010 431 aaKnown RBP23.15■■□□□ 1.3
PRKCA-203ENST00000578063 CNTNAP4Q9C0A0 1308 aa23.14■■□□□ 1.3
PRKCA-203ENST00000578063 NUCB1Q02818 461 aa23.14■■□□□ 1.3
PRKCA-203ENST00000578063 SKAP1Q86WV1 359 aa23.14■■□□□ 1.3
PRKCA-203ENST00000578063 RGS17Q9UGC6 210 aaPredicted RBP23.14■■□□□ 1.3
PRKCA-203ENST00000578063 LY75O60449 1722 aa23.14■■□□□ 1.29
PRKCA-203ENST00000578063 ATP5J2-PTCD1G3V325 749 aa23.13■■□□□ 1.29
PRKCA-203ENST00000578063 AFDNP55196 1824 aaKnown RBP23.13■■□□□ 1.29
PRKCA-203ENST00000578063 ERVV-1B6SEH8 477 aa23.13■■□□□ 1.29
PRKCA-203ENST00000578063 TCIRG1Q13488 830 aa23.13■■□□□ 1.29
PRKCA-203ENST00000578063 HSP90AB3PQ58FF7 597 aa23.13■■□□□ 1.29
PRKCA-203ENST00000578063 CCDC191Q8NCU4 936 aa23.13■■□□□ 1.29
PRKCA-203ENST00000578063 LINC00116Q8NCU8 138 aa23.13■■□□□ 1.29
PRKCA-203ENST00000578063 CWC25Q9NXE8 425 aaPredicted RBP23.13■■□□□ 1.29
PRKCA-203ENST00000578063 CCNL1Q9UK58 526 aaPredicted RBP23.13■■□□□ 1.29
PRKCA-203ENST00000578063 RGS3P49796 1198 aa23.12■■□□□ 1.29
PRKCA-203ENST00000578063 MTX1Q13505 466 aa23.12■■□□□ 1.29
PRKCA-203ENST00000578063 GIGYF2Q6Y7W6 1299 aaKnown RBP23.12■■□□□ 1.29
PRKCA-203ENST00000578063 DZIP3Q86Y13 1208 aaKnown RBP23.12■■□□□ 1.29
PRKCA-203ENST00000578063 ISCA1Q9BUE6 129 aa23.12■■□□□ 1.29
PRKCA-203ENST00000578063 COL15A1P39059 1388 aa23.12■■□□□ 1.29
PRKCA-203ENST00000578063 TRIM28Q13263 835 aaKnown RBP23.11■■□□□ 1.29
PRKCA-203ENST00000578063 ARXQ96QS3 562 aa23.11■■□□□ 1.29
PRKCA-203ENST00000578063 PNMA6EA0A0J9YXQ4 647 aa23.11■■□□□ 1.29
PRKCA-203ENST00000578063 RC3H1Q5TC82 1133 aaKnown RBP23.11■■□□□ 1.29
PRKCA-203ENST00000578063 POTEAQ6S8J7 498 aa23.11■■□□□ 1.29
PRKCA-203ENST00000578063 CHD1LQ86WJ1 897 aa23.11■■□□□ 1.29
PRKCA-203ENST00000578063 SSH3Q8TE77 659 aa23.11■■□□□ 1.29
PRKCA-203ENST00000578063 A0A087WZG4 1122 aa23.1■■□□□ 1.29
PRKCA-203ENST00000578063 PPP1R42Q7Z4L9 355 aa23.1■■□□□ 1.29
PRKCA-203ENST00000578063 SUCLG2Q96I99 432 aa23.1■■□□□ 1.29
PRKCA-203ENST00000578063 POLA2Q14181 598 aa23.09■■□□□ 1.29
PRKCA-203ENST00000578063 ANKRD45Q5TZF3 282 aa23.09■■□□□ 1.29
PRKCA-203ENST00000578063 MYH14Q7Z406 1995 aaKnown RBP23.09■■□□□ 1.29
PRKCA-203ENST00000578063 SRGAP3O43295 1099 aa23.08■■□□□ 1.29
PRKCA-203ENST00000578063 UBE3BQ7Z3V4 1068 aa23.08■■□□□ 1.28
PRKCA-203ENST00000578063 H7C1W4 665 aa23.07■■□□□ 1.28
PRKCA-203ENST00000578063 TRIM37O94972 964 aa23.07■■□□□ 1.28
PRKCA-203ENST00000578063 KAZALD1Q96I82 304 aa23.07■■□□□ 1.28
PRKCA-203ENST00000578063 ZBTB47Q9UFB7 747 aaPredicted RBP23.07■■□□□ 1.28
PRKCA-203ENST00000578063 TBC1D2BQ9UPU7 963 aa23.07■■□□□ 1.28
PRKCA-203ENST00000578063 CASP7P55210 303 aa23.06■■□□□ 1.28
PRKCA-203ENST00000578063 HLFQ16534 295 aa23.06■■□□□ 1.28
PRKCA-203ENST00000578063 LNPKQ9C0E8 428 aa23.06■■□□□ 1.28
PRKCA-203ENST00000578063 BICC1Q9H694 974 aaKnown RBP23.06■■□□□ 1.28
PRKCA-203ENST00000578063 KCNQ4P56696 695 aa23.05■■□□□ 1.28
PRKCA-203ENST00000578063 ANKRD36CQ5JPF3 1778 aa23.05■■□□□ 1.28
PRKCA-203ENST00000578063 CAMTA2O94983 1202 aa23.04■■□□□ 1.28
PRKCA-203ENST00000578063 HMGB2P26583 209 aaKnown RBP23.04■■□□□ 1.28
PRKCA-203ENST00000578063 PDE4AP27815 886 aa23.04■■□□□ 1.28
PRKCA-203ENST00000578063 SLC27A3Q5K4L6 730 aa23.04■■□□□ 1.28
PRKCA-203ENST00000578063 RGL2O15211 777 aa23.03■■□□□ 1.28
PRKCA-203ENST00000578063 RPS6KA4O75676 772 aa23.03■■□□□ 1.28
PRKCA-203ENST00000578063 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
PRKCA-203ENST00000578063 RABL6Q3YEC7 729 aaPredicted RBP23.02■■□□□ 1.28
PRKCA-203ENST00000578063 NLRP10Q86W26 655 aa23.02■■□□□ 1.28
PRKCA-203ENST00000578063 EXOC6BQ9Y2D4 811 aa23.02■■□□□ 1.28
PRKCA-203ENST00000578063 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
PRKCA-203ENST00000578063 PCCAP05165 728 aaPredicted RBP23.02■■□□□ 1.28
PRKCA-203ENST00000578063 HSP90AB4PQ58FF6 505 aa23.02■■□□□ 1.28
PRKCA-203ENST00000578063 C4BP0C0L5 1744 aa23.02■■□□□ 1.28
PRKCA-203ENST00000578063 NUP98P52948 1817 aa23.01■■□□□ 1.27
PRKCA-203ENST00000578063 GNPATO15228 680 aa23.01■■□□□ 1.27
PRKCA-203ENST00000578063 RAB11FIP3O75154 756 aa23.01■■□□□ 1.27
PRKCA-203ENST00000578063 ZNF34Q8IZ26 560 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms