RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 CWC15Q9P013 229 aaKnown RBP12.74□□□□□ -0.37
RNF43-203ENST00000577716 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
RNF43-203ENST00000577716 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
RNF43-203ENST00000577716 NEK1Q96PY6 1258 aa12.74□□□□□ -0.37
RNF43-203ENST00000577716 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
RNF43-203ENST00000577716 CHPF2Q9P2E5 772 aa12.74□□□□□ -0.37
RNF43-203ENST00000577716 PPIP5K1Q6PFW1 1433 aa12.74□□□□□ -0.37
RNF43-203ENST00000577716 OTUD7AQ8TE49 926 aaPredicted RBP12.74□□□□□ -0.37
RNF43-203ENST00000577716 NOL7Q9UMY1 257 aaKnown RBP12.74□□□□□ -0.37
RNF43-203ENST00000577716 AKAP2Q9Y2D5 859 aa12.74□□□□□ -0.37
RNF43-203ENST00000577716 ATP7AQ04656 1500 aa12.73□□□□□ -0.37
RNF43-203ENST00000577716 DYNC1I1O14576 645 aa12.73□□□□□ -0.37
RNF43-203ENST00000577716 EPS15P42566 896 aa12.73□□□□□ -0.37
RNF43-203ENST00000577716 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
RNF43-203ENST00000577716 RRAGDQ9NQL2 400 aaPredicted RBP12.73□□□□□ -0.37
RNF43-203ENST00000577716 RBM8AQ9Y5S9 174 aaKnown RBP12.73□□□□□ -0.37
RNF43-203ENST00000577716 GOLIM4O00461 696 aa12.73□□□□□ -0.37
RNF43-203ENST00000577716 NOM1Q5C9Z4 860 aaKnown RBP12.73□□□□□ -0.37
RNF43-203ENST00000577716 ATP5J2-PTCD1G3V325 749 aa12.73□□□□□ -0.37
RNF43-203ENST00000577716 TTC12Q9H892 705 aaPredicted RBP12.73□□□□□ -0.37
RNF43-203ENST00000577716 LRP2BPQ9P2M1 347 aa12.73□□□□□ -0.37
RNF43-203ENST00000577716 BRF1Q92994 677 aa12.72□□□□□ -0.37
RNF43-203ENST00000577716 BIN1O00499 593 aa12.72□□□□□ -0.37
RNF43-203ENST00000577716 DNM1Q05193 864 aaKnown RBP12.72□□□□□ -0.37
RNF43-203ENST00000577716 WASF1Q92558 559 aa12.72□□□□□ -0.37
RNF43-203ENST00000577716 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
RNF43-203ENST00000577716 HMG20BQ9P0W2 317 aa12.72□□□□□ -0.37
RNF43-203ENST00000577716 STIM1Q13586 685 aa12.72□□□□□ -0.37
RNF43-203ENST00000577716 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
RNF43-203ENST00000577716 CDK5RAP3Q96JB5 506 aa12.72□□□□□ -0.37
RNF43-203ENST00000577716 POGZQ7Z3K3 1410 aa12.72□□□□□ -0.37
RNF43-203ENST00000577716 NOLC1Q14978 699 aaKnown RBP eCLIP12.72□□□□□ -0.37
RNF43-203ENST00000577716 AXDND1Q5T1B0 1012 aaPredicted RBP12.72□□□□□ -0.37
RNF43-203ENST00000577716 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
RNF43-203ENST00000577716 ABCF2Q9UG63 623 aa12.72□□□□□ -0.37
RNF43-203ENST00000577716 CFAP65Q6ZU64 1925 aaKnown RBP12.71□□□□□ -0.37
RNF43-203ENST00000577716 SAMD9LQ8IVG5 1584 aa12.71□□□□□ -0.37
RNF43-203ENST00000577716 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.37
RNF43-203ENST00000577716 URI1O94763 535 aaPredicted RBP12.71□□□□□ -0.37
RNF43-203ENST00000577716 F13A1P00488 732 aa12.71□□□□□ -0.37
RNF43-203ENST00000577716 CHMLP26374 656 aa12.71□□□□□ -0.37
RNF43-203ENST00000577716 LEKR1Q6ZMV7 388 aa12.71□□□□□ -0.37
RNF43-203ENST00000577716 SNRKQ9NRH2 765 aa12.71□□□□□ -0.37
RNF43-203ENST00000577716 ZNF213O14771 459 aa12.71□□□□□ -0.37
RNF43-203ENST00000577716 ERLIN1O75477 346 aa12.71□□□□□ -0.37
RNF43-203ENST00000577716 ARHGAP29Q52LW3 1261 aa12.71□□□□□ -0.37
RNF43-203ENST00000577716 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
RNF43-203ENST00000577716 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
RNF43-203ENST00000577716 DACT1Q9NYF0 836 aa12.71□□□□□ -0.38
RNF43-203ENST00000577716 RAI14Q9P0K7 980 aa12.71□□□□□ -0.38
RNF43-203ENST00000577716 TCEAL9Q9UHQ7 104 aa12.71□□□□□ -0.38
RNF43-203ENST00000577716 KDM5CP41229 1560 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 NEMFO60524 1076 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 STX1AQ16623 288 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 DDX46Q7L014 1031 aaKnown RBP12.7□□□□□ -0.38
RNF43-203ENST00000577716 INTS4Q96HW7 963 aaKnown RBP12.7□□□□□ -0.38
RNF43-203ENST00000577716 NPATQ14207 1427 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 CAVIN2O95810 425 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 TOP1P11387 765 aaKnown RBP12.7□□□□□ -0.38
RNF43-203ENST00000577716 KLHL10Q6JEL2 608 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 TMCO3Q6UWJ1 677 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 FAM200AQ8TCP9 573 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 LRRC2Q9BYS8 371 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 NAPBQ9H115 298 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 ZBTB3Q9H5J0 574 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 USP16Q9Y5T5 823 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 EPB41L2O43491 1005 aaKnown RBP12.7□□□□□ -0.38
RNF43-203ENST00000577716 AK2P54819 239 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 HAND2P61296 217 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 IFIT5Q13325 482 aaKnown RBP12.7□□□□□ -0.38
RNF43-203ENST00000577716 SKIDA1Q1XH10 827 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 CCAR1Q8IX12 1150 aaKnown RBP12.7□□□□□ -0.38
RNF43-203ENST00000577716 PIBF1Q8WXW3 757 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 ORC3Q9UBD5 711 aaPredicted RBP12.7□□□□□ -0.38
RNF43-203ENST00000577716 ZFYVE9O95405 1425 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 TTC21AQ8NDW8 1320 aa12.7□□□□□ -0.38
RNF43-203ENST00000577716 POLR3DP05423 398 aaPredicted RBP12.69□□□□□ -0.38
RNF43-203ENST00000577716 CDR1P51861 262 aa12.69□□□□□ -0.38
RNF43-203ENST00000577716 G2E3Q7L622 706 aa12.69□□□□□ -0.38
RNF43-203ENST00000577716 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
RNF43-203ENST00000577716 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
RNF43-203ENST00000577716 PTPRTO14522 1441 aa12.69□□□□□ -0.38
RNF43-203ENST00000577716 HS1BP3Q53T59 392 aa12.69□□□□□ -0.38
RNF43-203ENST00000577716 MAGI2Q86UL8 1455 aa12.69□□□□□ -0.38
RNF43-203ENST00000577716 ERICH4A6NGS2 130 aa12.69□□□□□ -0.38
RNF43-203ENST00000577716 STARD3NLO95772 234 aa12.69□□□□□ -0.38
RNF43-203ENST00000577716 ZSCAN12O43309 604 aa12.69□□□□□ -0.38
RNF43-203ENST00000577716 CCDC43Q96MW1 224 aaKnown RBP12.69□□□□□ -0.38
RNF43-203ENST00000577716 ZSCAN16Q9H4T2 348 aaPredicted RBP12.69□□□□□ -0.38
RNF43-203ENST00000577716 GRM8O00222 908 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 DEF6Q9H4E7 631 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 SOS1Q07889 1333 aaPredicted RBP12.68□□□□□ -0.38
RNF43-203ENST00000577716 MINDY4BA8MYZ0 360 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 EIF3JO75822 258 aaKnown RBP12.68□□□□□ -0.38
RNF43-203ENST00000577716 ALDH1L1O75891 902 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 GSDMDP57764 484 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 ANO6Q4KMQ2 910 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 TMC6Q7Z403 805 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms