RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 BCORQ6W2J9 1755 aa15.79■□□□□ 0.12
CDH8-202ENST00000577228 LTBP3Q9NS15 1303 aa15.78■□□□□ 0.12
CDH8-202ENST00000577228 PIP4K2AP48426 406 aaPredicted RBP15.78■□□□□ 0.12
CDH8-202ENST00000577228 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
CDH8-202ENST00000577228 FER1L6Q2WGJ9 1857 aa15.78■□□□□ 0.12
CDH8-202ENST00000577228 PRAMEF22A3QJZ6 481 aa15.77■□□□□ 0.12
CDH8-202ENST00000577228 SNRPA1P09661 255 aaKnown RBP15.77■□□□□ 0.12
CDH8-202ENST00000577228 SRGNP10124 158 aa15.77■□□□□ 0.12
CDH8-202ENST00000577228 SOGA3Q5TF21 947 aa15.77■□□□□ 0.12
CDH8-202ENST00000577228 PRPF40BQ6NWY9 871 aaKnown RBP15.77■□□□□ 0.12
CDH8-202ENST00000577228 MCM10Q7L590 875 aa15.77■□□□□ 0.12
CDH8-202ENST00000577228 MASTLQ96GX5 879 aa15.77■□□□□ 0.12
CDH8-202ENST00000577228 ZNF652Q9Y2D9 606 aa15.77■□□□□ 0.12
CDH8-202ENST00000577228 POTECB2RU33 542 aa15.76■□□□□ 0.11
CDH8-202ENST00000577228 CLEC4GQ6UXB4 293 aa15.76■□□□□ 0.11
CDH8-202ENST00000577228 NBPF5PQ86XG9 351 aaPredicted RBP15.76■□□□□ 0.11
CDH8-202ENST00000577228 DICER1Q9UPY3 1922 aaKnown RBP15.75■□□□□ 0.11
CDH8-202ENST00000577228 PPP2R1AP30153 589 aa15.75■□□□□ 0.11
CDH8-202ENST00000577228 SLX4Q8IY92 1834 aa15.75■□□□□ 0.11
CDH8-202ENST00000577228 DCTN1Q14203 1278 aa15.74■□□□□ 0.11
CDH8-202ENST00000577228 ARFGEF2Q9Y6D5 1785 aa15.74■□□□□ 0.11
CDH8-202ENST00000577228 CACNA1SQ13698 1873 aa15.74■□□□□ 0.11
CDH8-202ENST00000577228 HTATSF1O43719 755 aaKnown RBP15.73■□□□□ 0.11
CDH8-202ENST00000577228 COL13A1Q5TAT6 717 aaPredicted RBP15.73■□□□□ 0.11
CDH8-202ENST00000577228 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
CDH8-202ENST00000577228 RGL2O15211 777 aa15.72■□□□□ 0.11
CDH8-202ENST00000577228 DDNO94850 711 aaPredicted RBP15.72■□□□□ 0.11
CDH8-202ENST00000577228 NPR1P16066 1061 aa15.72■□□□□ 0.11
CDH8-202ENST00000577228 CCDC93Q567U6 631 aa15.72■□□□□ 0.11
CDH8-202ENST00000577228 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
CDH8-202ENST00000577228 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
CDH8-202ENST00000577228 NIP7Q9Y221 180 aaKnown RBP eCLIP15.72■□□□□ 0.11
CDH8-202ENST00000577228 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
CDH8-202ENST00000577228 TPTE2Q6XPS3 522 aa15.71■□□□□ 0.11
CDH8-202ENST00000577228 C7orf43Q8WVR3 580 aa15.71■□□□□ 0.11
CDH8-202ENST00000577228 FAM177BA6PVY3 158 aa15.7■□□□□ 0.1
CDH8-202ENST00000577228 TAF7Q15545 349 aaPredicted RBP15.7■□□□□ 0.1
CDH8-202ENST00000577228 KLRG2A4D1S0 409 aaPredicted RBP15.69■□□□□ 0.1
CDH8-202ENST00000577228 IQCA1LA6NCM1 817 aa15.69■□□□□ 0.1
CDH8-202ENST00000577228 HSPA1AP0DMV8 641 aaKnown RBP15.69■□□□□ 0.1
CDH8-202ENST00000577228 HSPA1BP0DMV9 641 aaKnown RBP15.69■□□□□ 0.1
CDH8-202ENST00000577228 FKBP4Q02790 459 aaKnown RBP eCLIP15.69■□□□□ 0.1
CDH8-202ENST00000577228 NEFMP07197 916 aa15.68■□□□□ 0.1
CDH8-202ENST00000577228 POTEIP0CG38 1075 aa15.68■□□□□ 0.1
CDH8-202ENST00000577228 POTEJP0CG39 1038 aa15.68■□□□□ 0.1
CDH8-202ENST00000577228 TNS4Q8IZW8 715 aa15.68■□□□□ 0.1
CDH8-202ENST00000577228 L3MBTL3Q96JM7 780 aaPredicted RBP15.68■□□□□ 0.1
CDH8-202ENST00000577228 ZNF277Q9NRM2 450 aaPredicted RBP15.68■□□□□ 0.1
CDH8-202ENST00000577228 CREBZFQ9NS37 354 aa15.68■□□□□ 0.1
CDH8-202ENST00000577228 MIS18AQ9NYP9 233 aa15.68■□□□□ 0.1
CDH8-202ENST00000577228 LAMB4A4D0S4 1761 aa15.67■□□□□ 0.1
CDH8-202ENST00000577228 GTF2E1P29083 439 aaPredicted RBP15.67■□□□□ 0.1
CDH8-202ENST00000577228 HLFQ16534 295 aa15.67■□□□□ 0.1
CDH8-202ENST00000577228 RTKN2Q8IZC4 609 aa15.67■□□□□ 0.1
CDH8-202ENST00000577228 OLFM4Q6UX06 510 aa15.66■□□□□ 0.1
CDH8-202ENST00000577228 LDHDQ86WU2 507 aa15.66■□□□□ 0.1
CDH8-202ENST00000577228 NGEFQ8N5V2 710 aa15.66■□□□□ 0.1
CDH8-202ENST00000577228 PNISRQ8TF01 805 aaKnown RBP15.66■□□□□ 0.1
CDH8-202ENST00000577228 TAF1DQ9H5J8 278 aaPredicted RBP15.66■□□□□ 0.1
CDH8-202ENST00000577228 ZNF541Q9H0D2 1346 aa15.66■□□□□ 0.1
CDH8-202ENST00000577228 CAPN15O75808 1086 aa15.65■□□□□ 0.1
CDH8-202ENST00000577228 ALDH1B1P30837 517 aa15.65■□□□□ 0.1
CDH8-202ENST00000577228 NYXQ9GZU5 481 aa15.65■□□□□ 0.1
CDH8-202ENST00000577228 MKRN1Q9UHC7 482 aaKnown RBP15.65■□□□□ 0.1
CDH8-202ENST00000577228 ABCC12Q96J65 1359 aa15.64■□□□□ 0.09
CDH8-202ENST00000577228 SCN4AP35499 1836 aa15.64■□□□□ 0.09
CDH8-202ENST00000577228 ERVV-1B6SEH8 477 aa15.64■□□□□ 0.09
CDH8-202ENST00000577228 KIF6Q6ZMV9 814 aa15.64■□□□□ 0.09
CDH8-202ENST00000577228 KDM3BQ7LBC6 1761 aa15.64■□□□□ 0.09
CDH8-202ENST00000577228 MAP3K15Q6ZN16 1313 aa15.64■□□□□ 0.09
CDH8-202ENST00000577228 IARSP41252 1262 aaKnown RBP15.63■□□□□ 0.09
CDH8-202ENST00000577228 EAPPQ56P03 285 aaPredicted RBP15.63■□□□□ 0.09
CDH8-202ENST00000577228 NUTM1Q86Y26 1132 aa15.63■□□□□ 0.09
CDH8-202ENST00000577228 SYNE4Q8N205 404 aa15.63■□□□□ 0.09
CDH8-202ENST00000577228 HACL1Q9UJ83 578 aa15.63■□□□□ 0.09
CDH8-202ENST00000577228 RRP7AQ9Y3A4 280 aaKnown RBP15.63■□□□□ 0.09
CDH8-202ENST00000577228 PASKQ96RG2 1323 aa15.63■□□□□ 0.09
CDH8-202ENST00000577228 EIF4A1P60842 406 aaKnown RBP15.62■□□□□ 0.09
CDH8-202ENST00000577228 NFE2L2Q16236 605 aa15.62■□□□□ 0.09
CDH8-202ENST00000577228 CRY2Q49AN0 593 aa15.62■□□□□ 0.09
CDH8-202ENST00000577228 THUMPD2Q9BTF0 503 aaKnown RBP15.62■□□□□ 0.09
CDH8-202ENST00000577228 DLG5Q8TDM6 1919 aa15.62■□□□□ 0.09
CDH8-202ENST00000577228 CNTNAP1P78357 1384 aa15.62■□□□□ 0.09
CDH8-202ENST00000577228 MYL6BP14649 208 aa15.61■□□□□ 0.09
CDH8-202ENST00000577228 EPHX2P34913 555 aa15.61■□□□□ 0.09
CDH8-202ENST00000577228 TTLL7Q6ZT98 887 aa15.61■□□□□ 0.09
CDH8-202ENST00000577228 RPGRQ92834 1020 aaKnown RBP15.61■□□□□ 0.09
CDH8-202ENST00000577228 PLEKHF1Q96S99 279 aa15.61■□□□□ 0.09
CDH8-202ENST00000577228 PSMD1Q99460 953 aa15.61■□□□□ 0.09
CDH8-202ENST00000577228 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
CDH8-202ENST00000577228 IBTKQ9P2D0 1353 aaPredicted RBP15.61■□□□□ 0.09
CDH8-202ENST00000577228 SNED1Q8TER0 1413 aa15.6■□□□□ 0.09
CDH8-202ENST00000577228 FZD9O00144 591 aa15.6■□□□□ 0.09
CDH8-202ENST00000577228 GPTP24298 496 aa15.6■□□□□ 0.09
CDH8-202ENST00000577228 CC2D2BQ6DHV5 1058 aa15.6■□□□□ 0.09
CDH8-202ENST00000577228 JDP2Q8WYK2 163 aa15.6■□□□□ 0.09
CDH8-202ENST00000577228 ZBTB3Q9H5J0 574 aa15.6■□□□□ 0.09
CDH8-202ENST00000577228 RNF123Q5XPI4 1314 aa15.6■□□□□ 0.09
CDH8-202ENST00000577228 MAPK8IP3Q9UPT6 1336 aa15.6■□□□□ 0.09
CDH8-202ENST00000577228 RIC1Q4ADV7 1423 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms