RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 BRCA1P38398 1863 aaKnown RBP12.68□□□□□ -0.38
NDE1-212ENST00000577101 TBC1D9BQ66K14 1250 aa12.68□□□□□ -0.38
NDE1-212ENST00000577101 G2E3Q7L622 706 aa12.68□□□□□ -0.38
NDE1-212ENST00000577101 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
NDE1-212ENST00000577101 E9PSI1 815 aa12.67□□□□□ -0.38
NDE1-212ENST00000577101 NFIXQ14938 502 aa12.67□□□□□ -0.38
NDE1-212ENST00000577101 XAGE3Q8WTP9 111 aa12.67□□□□□ -0.38
NDE1-212ENST00000577101 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
NDE1-212ENST00000577101 ZBED9Q6R2W3 1325 aa12.66□□□□□ -0.38
NDE1-212ENST00000577101 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
NDE1-212ENST00000577101 COL11A2P13942 1736 aaPredicted RBP12.66□□□□□ -0.38
NDE1-212ENST00000577101 POLRMTO00411 1230 aaKnown RBP12.66□□□□□ -0.38
NDE1-212ENST00000577101 MMP10P09238 476 aa12.66□□□□□ -0.38
NDE1-212ENST00000577101 COPS6Q7L5N1 327 aa12.66□□□□□ -0.38
NDE1-212ENST00000577101 MYH16Q9H6N6 1097 aa12.66□□□□□ -0.38
NDE1-212ENST00000577101 CARMIL3Q8ND23 1372 aa12.66□□□□□ -0.38
NDE1-212ENST00000577101 LAMB2P55268 1798 aa12.66□□□□□ -0.38
NDE1-212ENST00000577101 A0A087WZG4 1122 aa12.65□□□□□ -0.38
NDE1-212ENST00000577101 ZPR1O75312 459 aa12.65□□□□□ -0.38
NDE1-212ENST00000577101 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
NDE1-212ENST00000577101 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.38
NDE1-212ENST00000577101 DLEC1Q9Y238 1755 aa12.65□□□□□ -0.38
NDE1-212ENST00000577101 UBN2Q6ZU65 1347 aa12.64□□□□□ -0.39
NDE1-212ENST00000577101 C10orf71Q711Q0 1435 aa12.64□□□□□ -0.39
NDE1-212ENST00000577101 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
NDE1-212ENST00000577101 NLGN1Q8N2Q7 840 aa12.64□□□□□ -0.39
NDE1-212ENST00000577101 ARXQ96QS3 562 aa12.64□□□□□ -0.39
NDE1-212ENST00000577101 DDX60Q8IY21 1712 aaKnown RBP12.64□□□□□ -0.39
NDE1-212ENST00000577101 ADCY9O60503 1353 aa12.64□□□□□ -0.39
NDE1-212ENST00000577101 ATP10DQ9P241 1426 aa12.63□□□□□ -0.39
NDE1-212ENST00000577101 ERVV-1B6SEH8 477 aa12.63□□□□□ -0.39
NDE1-212ENST00000577101 CCDC30Q5VVM6 783 aa12.63□□□□□ -0.39
NDE1-212ENST00000577101 BICDL1Q6ZP65 573 aa12.63□□□□□ -0.39
NDE1-212ENST00000577101 FHDC1Q9C0D6 1143 aaPredicted RBP12.63□□□□□ -0.39
NDE1-212ENST00000577101 GIGYF2Q6Y7W6 1299 aaKnown RBP12.62□□□□□ -0.39
NDE1-212ENST00000577101 ZNF34Q8IZ26 560 aa12.62□□□□□ -0.39
NDE1-212ENST00000577101 NLGN2Q8NFZ4 835 aa12.62□□□□□ -0.39
NDE1-212ENST00000577101 HYPKQ9NX55 129 aa12.62□□□□□ -0.39
NDE1-212ENST00000577101 SRCAPQ6ZRS2 3230 aa12.62□□□□□ -0.39
NDE1-212ENST00000577101 CACNA1SQ13698 1873 aa12.61□□□□□ -0.39
NDE1-212ENST00000577101 RGL2O15211 777 aa12.61□□□□□ -0.39
NDE1-212ENST00000577101 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
NDE1-212ENST00000577101 SERPINB2P05120 415 aa12.61□□□□□ -0.39
NDE1-212ENST00000577101 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
NDE1-212ENST00000577101 CCDC24Q8N4L8 307 aa12.61□□□□□ -0.39
NDE1-212ENST00000577101 MRPL50Q8N5N7 158 aaKnown RBP12.61□□□□□ -0.39
NDE1-212ENST00000577101 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
NDE1-212ENST00000577101 PXDNLA1KZ92 1463 aa12.6□□□□□ -0.39
NDE1-212ENST00000577101 POLD1P28340 1107 aa12.6□□□□□ -0.39
NDE1-212ENST00000577101 PLBD2Q8NHP8 589 aa12.6□□□□□ -0.39
NDE1-212ENST00000577101 ZNF428Q96B54 188 aa12.6□□□□□ -0.39
NDE1-212ENST00000577101 SYT17Q9BSW7 474 aa12.6□□□□□ -0.39
NDE1-212ENST00000577101 COL4A1P02462 1669 aa12.6□□□□□ -0.39
NDE1-212ENST00000577101 TAF1P21675 1872 aa12.59□□□□□ -0.39
NDE1-212ENST00000577101 ABCC12Q96J65 1359 aa12.59□□□□□ -0.39
NDE1-212ENST00000577101 GPTP24298 496 aa12.59□□□□□ -0.39
NDE1-212ENST00000577101 SUSD4Q5VX71 490 aa12.59□□□□□ -0.39
NDE1-212ENST00000577101 PRR5LQ6MZQ0 368 aa12.59□□□□□ -0.39
NDE1-212ENST00000577101 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
NDE1-212ENST00000577101 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
NDE1-212ENST00000577101 ISCA1Q9BUE6 129 aa12.59□□□□□ -0.39
NDE1-212ENST00000577101 BCL2L13Q9BXK5 485 aa12.59□□□□□ -0.39
NDE1-212ENST00000577101 NIP7Q9Y221 180 aaKnown RBP eCLIP12.59□□□□□ -0.39
NDE1-212ENST00000577101 NTSR2O95665 410 aa12.58□□□□□ -0.4
NDE1-212ENST00000577101 KCNA3P22001 575 aa12.58□□□□□ -0.4
NDE1-212ENST00000577101 FLIIQ13045 1269 aa12.58□□□□□ -0.4
NDE1-212ENST00000577101 TCIRG1Q13488 830 aa12.58□□□□□ -0.4
NDE1-212ENST00000577101 SYNE4Q8N205 404 aa12.58□□□□□ -0.4
NDE1-212ENST00000577101 PARP3Q9Y6F1 533 aa12.58□□□□□ -0.4
NDE1-212ENST00000577101 PI4KAP2A4QPH2 592 aa12.57□□□□□ -0.4
NDE1-212ENST00000577101 ATP5J2-PTCD1G3V325 749 aa12.57□□□□□ -0.4
NDE1-212ENST00000577101 IGKV5-2P06315 115 aa12.57□□□□□ -0.4
NDE1-212ENST00000577101 NLRP10Q86W26 655 aa12.57□□□□□ -0.4
NDE1-212ENST00000577101 PI4KAP1Q8N8J0 262 aa12.57□□□□□ -0.4
NDE1-212ENST00000577101 SETDB2Q96T68 719 aa12.57□□□□□ -0.4
NDE1-212ENST00000577101 STK31Q9BXU1 1019 aa12.57□□□□□ -0.4
NDE1-212ENST00000577101 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
NDE1-212ENST00000577101 ARFGEF1Q9Y6D6 1849 aa12.56□□□□□ -0.4
NDE1-212ENST00000577101 FAM177BA6PVY3 158 aa12.56□□□□□ -0.4
NDE1-212ENST00000577101 F6X3S4 739 aa12.56□□□□□ -0.4
NDE1-212ENST00000577101 RARSP54136 660 aaKnown RBP12.56□□□□□ -0.4
NDE1-212ENST00000577101 KSR2Q6VAB6 950 aa12.56□□□□□ -0.4
NDE1-212ENST00000577101 C3orf67Q6ZVT6 689 aa12.56□□□□□ -0.4
NDE1-212ENST00000577101 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
NDE1-212ENST00000577101 PPP1R1BQ9UD71 204 aaPredicted RBP12.56□□□□□ -0.4
NDE1-212ENST00000577101 TNNQ9UQP3 1299 aa12.56□□□□□ -0.4
NDE1-212ENST00000577101 ZNF652Q9Y2D9 606 aa12.56□□□□□ -0.4
NDE1-212ENST00000577101 CD2APQ9Y5K6 639 aa12.56□□□□□ -0.4
NDE1-212ENST00000577101 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
NDE1-212ENST00000577101 SLX4Q8IY92 1834 aa12.55□□□□□ -0.4
NDE1-212ENST00000577101 MYH3P11055 1940 aa12.55□□□□□ -0.4
NDE1-212ENST00000577101 BCAR3O75815 825 aa12.55□□□□□ -0.4
NDE1-212ENST00000577101 ALDH1L2Q3SY69 923 aa12.55□□□□□ -0.4
NDE1-212ENST00000577101 ERFEQ4G0M1 354 aa12.55□□□□□ -0.4
NDE1-212ENST00000577101 NPM2Q86SE8 214 aaKnown RBP12.55□□□□□ -0.4
NDE1-212ENST00000577101 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
NDE1-212ENST00000577101 MYD88Q99836 296 aa12.55□□□□□ -0.4
NDE1-212ENST00000577101 METTL22Q9BUU2 404 aaPredicted RBP12.55□□□□□ -0.4
NDE1-212ENST00000577101 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
NDE1-212ENST00000577101 DPEP1P16444 411 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms