RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 NEK4P51957 841 aa17.12■□□□□ 0.33
RAB40B-211ENST00000576359 PKP1Q13835 747 aa17.12■□□□□ 0.33
RAB40B-211ENST00000576359 BRINP3Q76B58 766 aa17.12■□□□□ 0.33
RAB40B-211ENST00000576359 LRP10Q7Z4F1 713 aa17.12■□□□□ 0.33
RAB40B-211ENST00000576359 DCAF5Q96JK2 942 aa17.12■□□□□ 0.33
RAB40B-211ENST00000576359 GLI3P10071 1580 aa17.12■□□□□ 0.33
RAB40B-211ENST00000576359 OS9Q13438 667 aaPredicted RBP17.11■□□□□ 0.33
RAB40B-211ENST00000576359 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
RAB40B-211ENST00000576359 PLEKHG2Q9H7P9 1386 aa17.11■□□□□ 0.33
RAB40B-211ENST00000576359 FAM43AQ8N2R8 423 aa17.11■□□□□ 0.33
RAB40B-211ENST00000576359 XAGE3Q8WTP9 111 aa17.11■□□□□ 0.33
RAB40B-211ENST00000576359 IL17RAQ96F46 866 aa17.11■□□□□ 0.33
RAB40B-211ENST00000576359 USP16Q9Y5T5 823 aa17.11■□□□□ 0.33
RAB40B-211ENST00000576359 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.11■□□□□ 0.33
RAB40B-211ENST00000576359 MCCP23508 829 aa17.1■□□□□ 0.33
RAB40B-211ENST00000576359 RIC3Q7Z5B4 369 aa17.1■□□□□ 0.33
RAB40B-211ENST00000576359 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
RAB40B-211ENST00000576359 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
RAB40B-211ENST00000576359 ANAPC15P60006 121 aa17.1■□□□□ 0.33
RAB40B-211ENST00000576359 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
RAB40B-211ENST00000576359 ISY1Q9ULR0 285 aaKnown RBP17.1■□□□□ 0.33
RAB40B-211ENST00000576359 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
RAB40B-211ENST00000576359 TTC41PQ6P2S7 1318 aa17.09■□□□□ 0.33
RAB40B-211ENST00000576359 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
RAB40B-211ENST00000576359 SGSM2O43147 1006 aa17.09■□□□□ 0.33
RAB40B-211ENST00000576359 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
RAB40B-211ENST00000576359 PARP4Q9UKK3 1724 aaKnown RBP17.09■□□□□ 0.33
RAB40B-211ENST00000576359 LARP1Q6PKG0 1096 aaKnown RBP17.08■□□□□ 0.33
RAB40B-211ENST00000576359 CLASRPQ8N2M8 674 aaKnown RBP17.08■□□□□ 0.33
RAB40B-211ENST00000576359 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.32
RAB40B-211ENST00000576359 GAS2L3Q86XJ1 694 aa17.08■□□□□ 0.32
RAB40B-211ENST00000576359 TMX3Q96JJ7 454 aa17.08■□□□□ 0.32
RAB40B-211ENST00000576359 HDAC5Q9UQL6 1122 aa17.08■□□□□ 0.32
RAB40B-211ENST00000576359 SASH1O94885 1247 aa17.07■□□□□ 0.32
RAB40B-211ENST00000576359 MCTP1Q6DN14 999 aa17.07■□□□□ 0.32
RAB40B-211ENST00000576359 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
RAB40B-211ENST00000576359 MYD88Q99836 296 aa17.07■□□□□ 0.32
RAB40B-211ENST00000576359 GLRX3O76003 335 aaKnown RBP17.07■□□□□ 0.32
RAB40B-211ENST00000576359 HSPA4P34932 840 aa17.07■□□□□ 0.32
RAB40B-211ENST00000576359 GCKRQ14397 625 aa17.07■□□□□ 0.32
RAB40B-211ENST00000576359 METTL22Q9BUU2 404 aaPredicted RBP17.07■□□□□ 0.32
RAB40B-211ENST00000576359 ZDHHC9Q9Y397 364 aa17.07■□□□□ 0.32
RAB40B-211ENST00000576359 DDX49Q9Y6V7 483 aaKnown RBP17.07■□□□□ 0.32
RAB40B-211ENST00000576359 EPB41L2O43491 1005 aaKnown RBP17.06■□□□□ 0.32
RAB40B-211ENST00000576359 ERC1Q8IUD2 1116 aa17.06■□□□□ 0.32
RAB40B-211ENST00000576359 STRCQ7RTU9 1775 aa17.06■□□□□ 0.32
RAB40B-211ENST00000576359 RAD50Q92878 1312 aa17.06■□□□□ 0.32
RAB40B-211ENST00000576359 MCM2P49736 904 aa17.06■□□□□ 0.32
RAB40B-211ENST00000576359 KLHL40Q2TBA0 621 aa17.06■□□□□ 0.32
RAB40B-211ENST00000576359 EPHA10Q5JZY3 1008 aa17.06■□□□□ 0.32
RAB40B-211ENST00000576359 FMNL2Q96PY5 1086 aa17.06■□□□□ 0.32
RAB40B-211ENST00000576359 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
RAB40B-211ENST00000576359 LSG1Q9H089 658 aaKnown RBP17.06■□□□□ 0.32
RAB40B-211ENST00000576359 CABP4P57796 275 aa17.05■□□□□ 0.32
RAB40B-211ENST00000576359 ECHDC1Q9NTX5 307 aa17.05■□□□□ 0.32
RAB40B-211ENST00000576359 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
RAB40B-211ENST00000576359 ARFGEF2Q9Y6D5 1785 aa17.05■□□□□ 0.32
RAB40B-211ENST00000576359 KCNA4P22459 653 aa17.05■□□□□ 0.32
RAB40B-211ENST00000576359 NEXNQ0ZGT2 675 aa17.05■□□□□ 0.32
RAB40B-211ENST00000576359 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
RAB40B-211ENST00000576359 IFIT2P09913 472 aaKnown RBP17.04■□□□□ 0.32
RAB40B-211ENST00000576359 CUL4AQ13619 759 aa17.04■□□□□ 0.32
RAB40B-211ENST00000576359 CWC27Q6UX04 472 aaKnown RBP17.04■□□□□ 0.32
RAB40B-211ENST00000576359 AACSQ86V21 672 aa17.04■□□□□ 0.32
RAB40B-211ENST00000576359 KLHDC4Q8TBB5 520 aa17.04■□□□□ 0.32
RAB40B-211ENST00000576359 WDR17Q8IZU2 1322 aa17.04■□□□□ 0.32
RAB40B-211ENST00000576359 AFDNP55196 1824 aaKnown RBP17.04■□□□□ 0.32
RAB40B-211ENST00000576359 NOL8Q76FK4 1167 aaKnown RBP17.04■□□□□ 0.32
RAB40B-211ENST00000576359 EAF2Q96CJ1 260 aaPredicted RBP17.04■□□□□ 0.32
RAB40B-211ENST00000576359 SIL1Q9H173 461 aa17.03■□□□□ 0.32
RAB40B-211ENST00000576359 PRDM11Q9NQV5 511 aa17.03■□□□□ 0.32
RAB40B-211ENST00000576359 LMBRD1Q9NUN5 540 aa17.03■□□□□ 0.32
RAB40B-211ENST00000576359 TLR7Q9NYK1 1049 aaKnown RBP17.03■□□□□ 0.32
RAB40B-211ENST00000576359 COL5A2P05997 1499 aaPredicted RBP17.03■□□□□ 0.32
RAB40B-211ENST00000576359 SOS2Q07890 1332 aaPredicted RBP17.03■□□□□ 0.32
RAB40B-211ENST00000576359 JARID2Q92833 1246 aaPredicted RBP17.03■□□□□ 0.32
RAB40B-211ENST00000576359 ABCA3Q99758 1704 aa17.03■□□□□ 0.32
RAB40B-211ENST00000576359 G3BP1Q13283 466 aaKnown RBP eCLIP17.02■□□□□ 0.32
RAB40B-211ENST00000576359 SNX14Q9Y5W7 946 aa17.02■□□□□ 0.32
RAB40B-211ENST00000576359 UBE2Q2Q8WVN8 375 aa17.02■□□□□ 0.31
RAB40B-211ENST00000576359 RRAGDQ9NQL2 400 aaPredicted RBP17.02■□□□□ 0.31
RAB40B-211ENST00000576359 TOM1L2Q6ZVM7 507 aa17.01■□□□□ 0.31
RAB40B-211ENST00000576359 RASEFQ8IZ41 740 aa17.01■□□□□ 0.31
RAB40B-211ENST00000576359 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
RAB40B-211ENST00000576359 CCDC8Q9H0W5 538 aaPredicted RBP17.01■□□□□ 0.31
RAB40B-211ENST00000576359 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
RAB40B-211ENST00000576359 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
RAB40B-211ENST00000576359 UBR2Q8IWV8 1755 aa17.01■□□□□ 0.31
RAB40B-211ENST00000576359 SLAIN2Q9P270 581 aa17.01■□□□□ 0.31
RAB40B-211ENST00000576359 ZCRB1Q8TBF4 217 aaKnown RBP17■□□□□ 0.31
RAB40B-211ENST00000576359 DIAPH3Q9NSV4 1193 aa17■□□□□ 0.31
RAB40B-211ENST00000576359 PCDH11XQ9BZA7 1347 aa17■□□□□ 0.31
RAB40B-211ENST00000576359 PCDH11YQ9BZA8 1340 aa17■□□□□ 0.31
RAB40B-211ENST00000576359 CHAMP1Q96JM3 812 aa17■□□□□ 0.31
RAB40B-211ENST00000576359 NBPF26B4DH59 902 aa16.99■□□□□ 0.31
RAB40B-211ENST00000576359 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
RAB40B-211ENST00000576359 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
RAB40B-211ENST00000576359 NCLP19338 710 aaKnown RBP16.99■□□□□ 0.31
RAB40B-211ENST00000576359 PTH1RQ03431 593 aa16.99■□□□□ 0.31
RAB40B-211ENST00000576359 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms