RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 RASEFQ8IZ41 740 aa10.81□□□□□ -0.68
NCBP3-204ENST00000574911 AXIN2Q9Y2T1 843 aa10.81□□□□□ -0.68
NCBP3-204ENST00000574911 CWC27Q6UX04 472 aaKnown RBP10.81□□□□□ -0.68
NCBP3-204ENST00000574911 ECHDC1Q9NTX5 307 aa10.81□□□□□ -0.68
NCBP3-204ENST00000574911 RPAP1Q9BWH6 1393 aaPredicted RBP10.81□□□□□ -0.68
NCBP3-204ENST00000574911 WDR33Q9C0J8 1336 aaKnown RBP10.81□□□□□ -0.68
NCBP3-204ENST00000574911 CWF19L2Q2TBE0 894 aaKnown RBP10.8□□□□□ -0.68
NCBP3-204ENST00000574911 KIAA1211Q6ZU35 1233 aa10.8□□□□□ -0.68
NCBP3-204ENST00000574911 LINS1Q8NG48 757 aa10.8□□□□□ -0.68
NCBP3-204ENST00000574911 KCNB2Q92953 911 aa10.8□□□□□ -0.68
NCBP3-204ENST00000574911 AK2P54819 239 aa10.8□□□□□ -0.68
NCBP3-204ENST00000574911 PDIA6Q15084 440 aa10.8□□□□□ -0.68
NCBP3-204ENST00000574911 KRT28Q7Z3Y7 464 aa10.8□□□□□ -0.68
NCBP3-204ENST00000574911 KAZALD1Q96I82 304 aa10.8□□□□□ -0.68
NCBP3-204ENST00000574911 SUCLG2Q96I99 432 aa10.8□□□□□ -0.68
NCBP3-204ENST00000574911 PDLIM2Q96JY6 352 aa10.8□□□□□ -0.68
NCBP3-204ENST00000574911 DDX21Q9NR30 783 aaKnown RBP eCLIP10.8□□□□□ -0.68
NCBP3-204ENST00000574911 PA2G4Q9UQ80 394 aaKnown RBP10.8□□□□□ -0.68
NCBP3-204ENST00000574911 ADAMTSL3P82987 1691 aa10.8□□□□□ -0.68
NCBP3-204ENST00000574911 GRM8O00222 908 aa10.79□□□□□ -0.68
NCBP3-204ENST00000574911 RUFY3Q7L099 469 aa10.79□□□□□ -0.68
NCBP3-204ENST00000574911 RUFY2Q8WXA3 655 aa10.79□□□□□ -0.68
NCBP3-204ENST00000574911 GPATCH3Q96I76 525 aa10.79□□□□□ -0.68
NCBP3-204ENST00000574911 DIAPH3Q9NSV4 1193 aa10.79□□□□□ -0.68
NCBP3-204ENST00000574911 SPG7Q9UQ90 795 aa10.79□□□□□ -0.68
NCBP3-204ENST00000574911 KIF1AQ12756 1690 aa10.79□□□□□ -0.68
NCBP3-204ENST00000574911 SYCE3A1L190 88 aa10.79□□□□□ -0.68
NCBP3-204ENST00000574911 IFIT2P09913 472 aaKnown RBP10.79□□□□□ -0.68
NCBP3-204ENST00000574911 LIMCH1Q9UPQ0 1083 aa10.79□□□□□ -0.68
NCBP3-204ENST00000574911 DDX58O95786 925 aaKnown RBP10.78□□□□□ -0.68
NCBP3-204ENST00000574911 HS1BP3Q53T59 392 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 EVI5LQ96CN4 794 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 SASH1O94885 1247 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 PTH1RQ03431 593 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 LMOD2Q6P5Q4 547 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 ZSCAN30Q86W11 494 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 TMEM87AQ8NBN3 555 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 ERBB3P21860 1342 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 USP48Q86UV5 1035 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 AACSQ86V21 672 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 TM6SF1Q9BZW5 370 aa10.78□□□□□ -0.68
NCBP3-204ENST00000574911 BICC1Q9H694 974 aaKnown RBP10.78□□□□□ -0.68
NCBP3-204ENST00000574911 C1orf167Q5SNV9 1468 aa10.77□□□□□ -0.68
NCBP3-204ENST00000574911 GADD45BO75293 160 aaPredicted RBP10.77□□□□□ -0.69
NCBP3-204ENST00000574911 IGKV5-2P06315 115 aa10.77□□□□□ -0.69
NCBP3-204ENST00000574911 TRHP20396 242 aaPredicted RBP10.77□□□□□ -0.69
NCBP3-204ENST00000574911 NAP1L5Q96NT1 182 aaPredicted RBP10.77□□□□□ -0.69
NCBP3-204ENST00000574911 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.77□□□□□ -0.69
NCBP3-204ENST00000574911 ALS2Q96Q42 1657 aa10.77□□□□□ -0.69
NCBP3-204ENST00000574911 RGPD5Q99666 1765 aa10.77□□□□□ -0.69
NCBP3-204ENST00000574911 KDM6AO15550 1401 aaPredicted RBP10.77□□□□□ -0.69
NCBP3-204ENST00000574911 C5P01031 1676 aa10.77□□□□□ -0.69
NCBP3-204ENST00000574911 ZSCAN22P10073 491 aaPredicted RBP10.77□□□□□ -0.69
NCBP3-204ENST00000574911 VPS53Q5VIR6 699 aa10.77□□□□□ -0.69
NCBP3-204ENST00000574911 ZNF790Q6PG37 636 aa10.77□□□□□ -0.69
NCBP3-204ENST00000574911 ZSWIM6Q9HCJ5 1215 aa10.77□□□□□ -0.69
NCBP3-204ENST00000574911 SNRKQ9NRH2 765 aa10.77□□□□□ -0.69
NCBP3-204ENST00000574911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.77□□□□□ -0.69
NCBP3-204ENST00000574911 MRC1P22897 1456 aa10.76□□□□□ -0.69
NCBP3-204ENST00000574911 CASTP20810 708 aaKnown RBP10.76□□□□□ -0.69
NCBP3-204ENST00000574911 AIMP1Q12904 312 aaKnown RBP10.76□□□□□ -0.69
NCBP3-204ENST00000574911 G3BP1Q13283 466 aaKnown RBP eCLIP10.76□□□□□ -0.69
NCBP3-204ENST00000574911 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
NCBP3-204ENST00000574911 SYAP1Q96A49 352 aaPredicted RBP10.76□□□□□ -0.69
NCBP3-204ENST00000574911 EAF2Q96CJ1 260 aaPredicted RBP10.76□□□□□ -0.69
NCBP3-204ENST00000574911 SLC52A2Q9HAB3 445 aa10.76□□□□□ -0.69
NCBP3-204ENST00000574911 CPA1P15085 419 aa10.76□□□□□ -0.69
NCBP3-204ENST00000574911 ADCK5Q3MIX3 580 aa10.76□□□□□ -0.69
NCBP3-204ENST00000574911 PRPF40BQ6NWY9 871 aaKnown RBP10.76□□□□□ -0.69
NCBP3-204ENST00000574911 LARP1Q6PKG0 1096 aaKnown RBP10.76□□□□□ -0.69
NCBP3-204ENST00000574911 PDRG1Q9NUG6 133 aa10.76□□□□□ -0.69
NCBP3-204ENST00000574911 SCN11AQ9UI33 1791 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 ABCC6O95255 1503 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 HIP1O00291 1037 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 STX6O43752 255 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 LARGE1O95461 756 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 RIC3Q7Z5B4 369 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 JAKMIP1Q96N16 626 aaKnown RBP10.75□□□□□ -0.69
NCBP3-204ENST00000574911 LARP6Q9BRS8 491 aaKnown RBP10.75□□□□□ -0.69
NCBP3-204ENST00000574911 GDPD2Q9HCC8 539 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 CCDC171Q6TFL3 1326 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 NPHP3Q7Z494 1330 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 NEURL1BA8MQ27 555 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 PHKG2P15735 406 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 SYT1P21579 422 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 SLC39A6Q13433 755 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 FOXD4L6Q3SYB3 417 aaPredicted RBP10.75□□□□□ -0.69
NCBP3-204ENST00000574911 FOXD4L3Q6VB84 417 aaPredicted RBP10.75□□□□□ -0.69
NCBP3-204ENST00000574911 PROSER2Q86WR7 435 aaPredicted RBP10.75□□□□□ -0.69
NCBP3-204ENST00000574911 ZSCAN31Q96LW9 406 aaPredicted RBP10.75□□□□□ -0.69
NCBP3-204ENST00000574911 CCDC8Q9H0W5 538 aaPredicted RBP10.75□□□□□ -0.69
NCBP3-204ENST00000574911 TSPY26PQ9H489 355 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 SMC3Q9UQE7 1217 aa10.75□□□□□ -0.69
NCBP3-204ENST00000574911 ZC3H6P61129 1189 aaKnown RBP10.74□□□□□ -0.69
NCBP3-204ENST00000574911 NMIQ13287 307 aaPredicted RBP10.74□□□□□ -0.69
NCBP3-204ENST00000574911 RAPGEF4Q8WZA2 1011 aa10.74□□□□□ -0.69
NCBP3-204ENST00000574911 MAP4K1Q92918 833 aa10.74□□□□□ -0.69
NCBP3-204ENST00000574911 F13A1P00488 732 aa10.74□□□□□ -0.69
NCBP3-204ENST00000574911 TATP17735 454 aaPredicted RBP10.74□□□□□ -0.69
NCBP3-204ENST00000574911 GCKRQ14397 625 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms