RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 COL5A3P25940 1745 aaPredicted RBP20.1■□□□□ 0.81
SMPD3-212ENST00000574662 PI4KAP2A4QPH2 592 aa20.1■□□□□ 0.81
SMPD3-212ENST00000574662 SF3B2Q13435 895 aaKnown RBP20.1■□□□□ 0.81
SMPD3-212ENST00000574662 RC3H1Q5TC82 1133 aaKnown RBP20.1■□□□□ 0.81
SMPD3-212ENST00000574662 PI4KAP1Q8N8J0 262 aa20.1■□□□□ 0.81
SMPD3-212ENST00000574662 CAMKK2Q96RR4 588 aa20.1■□□□□ 0.81
SMPD3-212ENST00000574662 CNTNAP4Q9C0A0 1308 aa20.09■□□□□ 0.81
SMPD3-212ENST00000574662 IL6STP40189 918 aaPredicted RBP20.09■□□□□ 0.81
SMPD3-212ENST00000574662 EIF5P55010 431 aaKnown RBP20.09■□□□□ 0.81
SMPD3-212ENST00000574662 ADCY9O60503 1353 aa20.09■□□□□ 0.81
SMPD3-212ENST00000574662 EZH2Q15910 746 aaKnown RBP20.08■□□□□ 0.81
SMPD3-212ENST00000574662 TMEM57Q8N5G2 664 aa20.08■□□□□ 0.81
SMPD3-212ENST00000574662 ABCC4O15439 1325 aa20.08■□□□□ 0.8
SMPD3-212ENST00000574662 KSR2Q6VAB6 950 aa20.08■□□□□ 0.8
SMPD3-212ENST00000574662 ANKRD13DQ6ZTN6 518 aa20.08■□□□□ 0.8
SMPD3-212ENST00000574662 DEFB132Q7Z7B7 95 aa20.08■□□□□ 0.8
SMPD3-212ENST00000574662 AMIGO3Q86WK7 504 aa20.08■□□□□ 0.8
SMPD3-212ENST00000574662 COG6Q9Y2V7 657 aa20.08■□□□□ 0.8
SMPD3-212ENST00000574662 FAM161AQ3B820 660 aa20.07■□□□□ 0.8
SMPD3-212ENST00000574662 FTSJ3Q8IY81 847 aaKnown RBP20.07■□□□□ 0.8
SMPD3-212ENST00000574662 TAF1LQ8IZX4 1826 aa20.07■□□□□ 0.8
SMPD3-212ENST00000574662 SLC4A10Q6U841 1118 aa20.06■□□□□ 0.8
SMPD3-212ENST00000574662 MAP3K2Q9Y2U5 619 aa20.06■□□□□ 0.8
SMPD3-212ENST00000574662 RREB1Q92766 1687 aa20.06■□□□□ 0.8
SMPD3-212ENST00000574662 RPS6KA4O75676 772 aa20.06■□□□□ 0.8
SMPD3-212ENST00000574662 GNPATO15228 680 aa20.05■□□□□ 0.8
SMPD3-212ENST00000574662 DDX58O95786 925 aaKnown RBP20.05■□□□□ 0.8
SMPD3-212ENST00000574662 RIC3Q7Z5B4 369 aa20.05■□□□□ 0.8
SMPD3-212ENST00000574662 DNAAF4Q8WXU2 420 aa20.05■□□□□ 0.8
SMPD3-212ENST00000574662 ARXQ96QS3 562 aa20.05■□□□□ 0.8
SMPD3-212ENST00000574662 TBC1D2BQ9UPU7 963 aa20.05■□□□□ 0.8
SMPD3-212ENST00000574662 PLBD2Q8NHP8 589 aa20.04■□□□□ 0.8
SMPD3-212ENST00000574662 ZBTB3Q9H5J0 574 aa20.04■□□□□ 0.8
SMPD3-212ENST00000574662 C4BP0C0L5 1744 aa20.04■□□□□ 0.8
SMPD3-212ENST00000574662 BAG6P46379 1132 aa20.03■□□□□ 0.8
SMPD3-212ENST00000574662 INTS3Q68E01 1043 aaKnown RBP20.03■□□□□ 0.8
SMPD3-212ENST00000574662 MVPQ14764 893 aaKnown RBP20.03■□□□□ 0.8
SMPD3-212ENST00000574662 DZIP3Q86Y13 1208 aaKnown RBP20.03■□□□□ 0.8
SMPD3-212ENST00000574662 AK7Q96M32 723 aa20.03■□□□□ 0.8
SMPD3-212ENST00000574662 AAMPQ13685 434 aa20.02■□□□□ 0.8
SMPD3-212ENST00000574662 BEND3Q5T5X7 828 aa20.02■□□□□ 0.8
SMPD3-212ENST00000574662 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.8
SMPD3-212ENST00000574662 RTCBQ9Y3I0 505 aaKnown RBP20.02■□□□□ 0.8
SMPD3-212ENST00000574662 HLFQ16534 295 aa20.01■□□□□ 0.79
SMPD3-212ENST00000574662 ZNF827Q17R98 1081 aa20.01■□□□□ 0.79
SMPD3-212ENST00000574662 AKT1S1Q96B36 256 aa20.01■□□□□ 0.79
SMPD3-212ENST00000574662 METTL22Q9BUU2 404 aaPredicted RBP20.01■□□□□ 0.79
SMPD3-212ENST00000574662 MAP3K15Q6ZN16 1313 aa20.01■□□□□ 0.79
SMPD3-212ENST00000574662 COL15A1P39059 1388 aa20.01■□□□□ 0.79
SMPD3-212ENST00000574662 KIF6Q6ZMV9 814 aa20■□□□□ 0.79
SMPD3-212ENST00000574662 RGPD3A6NKT7 1758 aaPredicted RBP20■□□□□ 0.79
SMPD3-212ENST00000574662 RGPD4Q7Z3J3 1758 aa20■□□□□ 0.79
SMPD3-212ENST00000574662 IGKV5-2P06315 115 aa20■□□□□ 0.79
SMPD3-212ENST00000574662 ARHGEF1Q92888 912 aaKnown RBP20■□□□□ 0.79
SMPD3-212ENST00000574662 MYD88Q99836 296 aa20■□□□□ 0.79
SMPD3-212ENST00000574662 PHF14O94880 888 aa19.99■□□□□ 0.79
SMPD3-212ENST00000574662 CAMTA2O94983 1202 aa19.99■□□□□ 0.79
SMPD3-212ENST00000574662 CCT4P50991 539 aaKnown RBP19.99■□□□□ 0.79
SMPD3-212ENST00000574662 C8orf34Q49A92 452 aa19.99■□□□□ 0.79
SMPD3-212ENST00000574662 ZBTB7BO15156 539 aaPredicted RBP19.98■□□□□ 0.79
SMPD3-212ENST00000574662 CWF19L2Q2TBE0 894 aaKnown RBP19.98■□□□□ 0.79
SMPD3-212ENST00000574662 SRCIN1Q9C0H9 1055 aa19.98■□□□□ 0.79
SMPD3-212ENST00000574662 A0A087WZG4 1122 aa19.98■□□□□ 0.79
SMPD3-212ENST00000574662 ERVV-1B6SEH8 477 aa19.98■□□□□ 0.79
SMPD3-212ENST00000574662 ATP5J2-PTCD1G3V325 749 aa19.98■□□□□ 0.79
SMPD3-212ENST00000574662 TRAPPC3LQ5T215 181 aa19.98■□□□□ 0.79
SMPD3-212ENST00000574662 GIGYF2Q6Y7W6 1299 aaKnown RBP19.98■□□□□ 0.79
SMPD3-212ENST00000574662 SKAP1Q86WV1 359 aa19.98■□□□□ 0.79
SMPD3-212ENST00000574662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.97■□□□□ 0.79
SMPD3-212ENST00000574662 LINS1Q8NG48 757 aa19.97■□□□□ 0.79
SMPD3-212ENST00000574662 ANO8Q9HCE9 1232 aaPredicted RBP19.97■□□□□ 0.79
SMPD3-212ENST00000574662 SRP68Q9UHB9 627 aaKnown RBP19.97■□□□□ 0.79
SMPD3-212ENST00000574662 ATP10DQ9P241 1426 aa19.96■□□□□ 0.79
SMPD3-212ENST00000574662 HMGB2P26583 209 aaKnown RBP19.96■□□□□ 0.79
SMPD3-212ENST00000574662 TCIRG1Q13488 830 aa19.96■□□□□ 0.79
SMPD3-212ENST00000574662 DDX19BQ9UMR2 479 aa19.96■□□□□ 0.79
SMPD3-212ENST00000574662 PXDNLA1KZ92 1463 aa19.96■□□□□ 0.79
SMPD3-212ENST00000574662 BCL2L12Q9HB09 334 aa19.95■□□□□ 0.78
SMPD3-212ENST00000574662 TFCP2L1Q9NZI6 479 aa19.95■□□□□ 0.78
SMPD3-212ENST00000574662 ARFGEF2Q9Y6D5 1785 aa19.95■□□□□ 0.78
SMPD3-212ENST00000574662 NUP188Q5SRE5 1749 aa19.95■□□□□ 0.78
SMPD3-212ENST00000574662 NEURL1BA8MQ27 555 aa19.95■□□□□ 0.78
SMPD3-212ENST00000574662 SSFA2P28290 1259 aa19.95■□□□□ 0.78
SMPD3-212ENST00000574662 NEXNQ0ZGT2 675 aa19.95■□□□□ 0.78
SMPD3-212ENST00000574662 MEIS3Q99687 375 aa19.95■□□□□ 0.78
SMPD3-212ENST00000574662 USP44Q9H0E7 712 aa19.95■□□□□ 0.78
SMPD3-212ENST00000574662 DAXXQ9UER7 740 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-212ENST00000574662 NARFQ9UHQ1 456 aa19.95■□□□□ 0.78
SMPD3-212ENST00000574662 ALDH1L1O75891 902 aa19.94■□□□□ 0.78
SMPD3-212ENST00000574662 USPL1Q5W0Q7 1092 aa19.94■□□□□ 0.78
SMPD3-212ENST00000574662 ISCA1Q9BUE6 129 aa19.94■□□□□ 0.78
SMPD3-212ENST00000574662 UBR3Q6ZT12 1888 aa19.94■□□□□ 0.78
SMPD3-212ENST00000574662 ADRA2BP18089 450 aa19.93■□□□□ 0.78
SMPD3-212ENST00000574662 RFC4P35249 363 aa19.93■□□□□ 0.78
SMPD3-212ENST00000574662 ZBTB40Q9NUA8 1239 aa19.93■□□□□ 0.78
SMPD3-212ENST00000574662 SLC15A2Q16348 729 aa19.93■□□□□ 0.78
SMPD3-212ENST00000574662 ZPR1O75312 459 aa19.92■□□□□ 0.78
SMPD3-212ENST00000574662 GPTP24298 496 aa19.92■□□□□ 0.78
SMPD3-212ENST00000574662 GCKRQ14397 625 aa19.92■□□□□ 0.78
SMPD3-212ENST00000574662 COL23A1Q86Y22 540 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms