RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 NLRP2Q9NX02 1062 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 WBP1LQ9NX94 342 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 RNF181Q9P0P0 153 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 MKRN1Q9UHC7 482 aaKnown RBP7.49□□□□□ -1.21
TRIM25-208ENST00000574234 COG6Q9Y2V7 657 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 TTC21AQ8NDW8 1320 aa7.49□□□□□ -1.21
TRIM25-208ENST00000574234 COL5A3P25940 1745 aaPredicted RBP7.48□□□□□ -1.21
TRIM25-208ENST00000574234 DDX54Q8TDD1 881 aaKnown RBP7.48□□□□□ -1.21
TRIM25-208ENST00000574234 DCAF5Q96JK2 942 aa7.48□□□□□ -1.21
TRIM25-208ENST00000574234 MPHOSPH9Q99550 1183 aa7.48□□□□□ -1.21
TRIM25-208ENST00000574234 POLR3EQ9NVU0 708 aa7.48□□□□□ -1.21
TRIM25-208ENST00000574234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.47□□□□□ -1.21
TRIM25-208ENST00000574234 A0A0G2JLW4 131 aa7.47□□□□□ -1.21
TRIM25-208ENST00000574234 GLTPD2A6NH11 291 aa7.47□□□□□ -1.21
TRIM25-208ENST00000574234 HSPA8P11142 646 aaKnown RBP7.47□□□□□ -1.21
TRIM25-208ENST00000574234 AEBP1Q8IUX7 1158 aa7.47□□□□□ -1.21
TRIM25-208ENST00000574234 BANK1Q8NDB2 785 aa7.47□□□□□ -1.21
TRIM25-208ENST00000574234 FER1L6Q2WGJ9 1857 aa7.47□□□□□ -1.21
TRIM25-208ENST00000574234 PALLDQ8WX93 1383 aa7.46□□□□□ -1.21
TRIM25-208ENST00000574234 KCNA3P22001 575 aa7.46□□□□□ -1.22
TRIM25-208ENST00000574234 SRPK2P78362 688 aaKnown RBP7.46□□□□□ -1.22
TRIM25-208ENST00000574234 IRX5P78411 483 aaPredicted RBP7.46□□□□□ -1.22
TRIM25-208ENST00000574234 TMEM92Q6UXU6 159 aa7.46□□□□□ -1.22
TRIM25-208ENST00000574234 AMIGO3Q86WK7 504 aa7.46□□□□□ -1.22
TRIM25-208ENST00000574234 RETREG2Q8NC44 543 aa7.46□□□□□ -1.22
TRIM25-208ENST00000574234 ANKRD24Q8TF21 1146 aa7.46□□□□□ -1.22
TRIM25-208ENST00000574234 CDHR5Q9HBB8 845 aa7.46□□□□□ -1.22
TRIM25-208ENST00000574234 FAM217BQ9NTX9 383 aaPredicted RBP7.46□□□□□ -1.22
TRIM25-208ENST00000574234 LTBP1Q14766 1721 aa7.46□□□□□ -1.22
TRIM25-208ENST00000574234 TTC21BQ7Z4L5 1316 aa7.46□□□□□ -1.22
TRIM25-208ENST00000574234 MMP10P09238 476 aa7.45□□□□□ -1.22
TRIM25-208ENST00000574234 DPEP1P16444 411 aa7.45□□□□□ -1.22
TRIM25-208ENST00000574234 PRPF38BQ5VTL8 546 aaKnown RBP7.45□□□□□ -1.22
TRIM25-208ENST00000574234 MYSM1Q5VVJ2 828 aa7.45□□□□□ -1.22
TRIM25-208ENST00000574234 OCEL1Q9H607 264 aa7.45□□□□□ -1.22
TRIM25-208ENST00000574234 SNRKQ9NRH2 765 aa7.45□□□□□ -1.22
TRIM25-208ENST00000574234 CABP1Q9NZU7 370 aa7.45□□□□□ -1.22
TRIM25-208ENST00000574234 PIM2Q9P1W9 311 aa7.45□□□□□ -1.22
TRIM25-208ENST00000574234 CASP8AP2Q9UKL3 1982 aa7.45□□□□□ -1.22
TRIM25-208ENST00000574234 ADAMTSL1Q8N6G6 1762 aa7.45□□□□□ -1.22
TRIM25-208ENST00000574234 AFDNP55196 1824 aaKnown RBP7.45□□□□□ -1.22
TRIM25-208ENST00000574234 USP31Q70CQ4 1352 aa7.45□□□□□ -1.22
TRIM25-208ENST00000574234 MEGF6O75095 1541 aa7.44□□□□□ -1.22
TRIM25-208ENST00000574234 C19orf67A6NJJ6 358 aa7.44□□□□□ -1.22
TRIM25-208ENST00000574234 PHF14O94880 888 aa7.44□□□□□ -1.22
TRIM25-208ENST00000574234 VEGFBP49765 207 aa7.44□□□□□ -1.22
TRIM25-208ENST00000574234 MAP2K1Q02750 393 aaPredicted RBP7.44□□□□□ -1.22
TRIM25-208ENST00000574234 RGS22Q8NE09 1264 aa7.44□□□□□ -1.22
TRIM25-208ENST00000574234 CCDC87Q9NVE4 849 aa7.44□□□□□ -1.22
TRIM25-208ENST00000574234 ZNF330Q9Y3S2 320 aaPredicted RBP7.44□□□□□ -1.22
TRIM25-208ENST00000574234 TRPM7Q96QT4 1865 aa7.44□□□□□ -1.22
TRIM25-208ENST00000574234 PASKQ96RG2 1323 aa7.44□□□□□ -1.22
TRIM25-208ENST00000574234 POTECB2RU33 542 aa7.43□□□□□ -1.22
TRIM25-208ENST00000574234 G3V3G9 751 aa7.43□□□□□ -1.22
TRIM25-208ENST00000574234 IRF5Q13568 498 aa7.43□□□□□ -1.22
TRIM25-208ENST00000574234 DALRD3Q5D0E6 543 aaKnown RBP7.43□□□□□ -1.22
TRIM25-208ENST00000574234 NLGN1Q8N2Q7 840 aa7.43□□□□□ -1.22
TRIM25-208ENST00000574234 ZCRB1Q8TBF4 217 aaKnown RBP7.43□□□□□ -1.22
TRIM25-208ENST00000574234 CGNL1Q0VF96 1302 aa7.43□□□□□ -1.22
TRIM25-208ENST00000574234 NRXN2Q9P2S2 1712 aa7.43□□□□□ -1.22
TRIM25-208ENST00000574234 LMNB1P20700 586 aa7.42□□□□□ -1.22
TRIM25-208ENST00000574234 RFC5P40937 340 aa7.42□□□□□ -1.22
TRIM25-208ENST00000574234 CLK2P49760 499 aaKnown RBP7.42□□□□□ -1.22
TRIM25-208ENST00000574234 SMIM5Q71RC9 77 aa7.42□□□□□ -1.22
TRIM25-208ENST00000574234 DCAF11Q8TEB1 546 aa7.42□□□□□ -1.22
TRIM25-208ENST00000574234 PTCD2Q8WV60 388 aaKnown RBP7.42□□□□□ -1.22
TRIM25-208ENST00000574234 SMARCC1Q92922 1105 aaPredicted RBP7.42□□□□□ -1.22
TRIM25-208ENST00000574234 EPAS1Q99814 870 aa7.42□□□□□ -1.22
TRIM25-208ENST00000574234 MYH14Q7Z406 1995 aaKnown RBP7.41□□□□□ -1.22
TRIM25-208ENST00000574234 RASSF10A6NK89 507 aa7.41□□□□□ -1.22
TRIM25-208ENST00000574234 TMEM88BA6NKF7 163 aa7.41□□□□□ -1.22
TRIM25-208ENST00000574234 TMEM259Q4ZIN3 620 aa7.41□□□□□ -1.22
TRIM25-208ENST00000574234 ARFGEF2Q9Y6D5 1785 aa7.41□□□□□ -1.22
TRIM25-208ENST00000574234 CACNA1SQ13698 1873 aa7.41□□□□□ -1.22
TRIM25-208ENST00000574234 TMF1P82094 1093 aa7.4□□□□□ -1.22
TRIM25-208ENST00000574234 TMCO4Q5TGY1 634 aa7.4□□□□□ -1.22
TRIM25-208ENST00000574234 PPP2R2DQ66LE6 453 aa7.4□□□□□ -1.22
TRIM25-208ENST00000574234 METTL3Q86U44 580 aaKnown RBP7.4□□□□□ -1.22
TRIM25-208ENST00000574234 GZF1Q9H116 711 aaPredicted RBP7.4□□□□□ -1.22
TRIM25-208ENST00000574234 CENPJQ9HC77 1338 aaPredicted RBP7.4□□□□□ -1.22
TRIM25-208ENST00000574234 KTN1Q86UP2 1357 aaKnown RBP7.4□□□□□ -1.22
TRIM25-208ENST00000574234 ADAMTS7Q9UKP4 1686 aa7.4□□□□□ -1.23
TRIM25-208ENST00000574234 CD163L1Q9NR16 1453 aa7.39□□□□□ -1.23
TRIM25-208ENST00000574234 SMG6Q86US8 1419 aaKnown RBP7.39□□□□□ -1.23
TRIM25-208ENST00000574234 WDR33Q9C0J8 1336 aaKnown RBP7.39□□□□□ -1.23
TRIM25-208ENST00000574234 MAP3K7O43318 606 aa7.39□□□□□ -1.23
TRIM25-208ENST00000574234 GALR2O43603 387 aaPredicted RBP7.39□□□□□ -1.23
TRIM25-208ENST00000574234 OATP04181 439 aa7.39□□□□□ -1.23
TRIM25-208ENST00000574234 ATN1P54259 1190 aaPredicted RBP7.39□□□□□ -1.23
TRIM25-208ENST00000574234 IER5LQ5T953 404 aa7.39□□□□□ -1.23
TRIM25-208ENST00000574234 LINC00116Q8NCU8 138 aa7.39□□□□□ -1.23
TRIM25-208ENST00000574234 GCC1Q96CN9 775 aa7.39□□□□□ -1.23
TRIM25-208ENST00000574234 L3MBTL3Q96JM7 780 aaPredicted RBP7.39□□□□□ -1.23
TRIM25-208ENST00000574234 TBC1D2Q9BYX2 928 aa7.39□□□□□ -1.23
TRIM25-208ENST00000574234 PARP3Q9Y6F1 533 aa7.39□□□□□ -1.23
TRIM25-208ENST00000574234 PCDH11XQ9BZA7 1347 aa7.38□□□□□ -1.23
TRIM25-208ENST00000574234 PCDH11YQ9BZA8 1340 aa7.38□□□□□ -1.23
TRIM25-208ENST00000574234 LOC102724428A0A0B4J2F2 783 aa7.38□□□□□ -1.23
TRIM25-208ENST00000574234 SIK1P57059 783 aa7.38□□□□□ -1.23
TRIM25-208ENST00000574234 RASSF7Q02833 373 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms