RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 MAP3K13O43283 966 aa13.2□□□□□ -0.3
RPA1-206ENST00000573994 BICDL1Q6ZP65 573 aa13.2□□□□□ -0.3
RPA1-206ENST00000573994 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
RPA1-206ENST00000573994 PNNQ9H307 717 aaKnown RBP13.2□□□□□ -0.3
RPA1-206ENST00000573994 USP16Q9Y5T5 823 aa13.2□□□□□ -0.3
RPA1-206ENST00000573994 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
RPA1-206ENST00000573994 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 A0A087WZG4 1122 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
RPA1-206ENST00000573994 TM4SF1P30408 202 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 TGFB2P61812 414 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 TAF7Q15545 349 aaPredicted RBP13.19□□□□□ -0.3
RPA1-206ENST00000573994 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
RPA1-206ENST00000573994 N4BP2Q86UW6 1770 aaPredicted RBP13.19□□□□□ -0.3
RPA1-206ENST00000573994 CHRNA5P30532 468 aa13.18□□□□□ -0.3
RPA1-206ENST00000573994 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
RPA1-206ENST00000573994 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
RPA1-206ENST00000573994 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
RPA1-206ENST00000573994 CARMIL3Q8ND23 1372 aa13.18□□□□□ -0.3
RPA1-206ENST00000573994 CHD4Q14839 1912 aa13.17□□□□□ -0.3
RPA1-206ENST00000573994 ATP10DQ9P241 1426 aa13.17□□□□□ -0.3
RPA1-206ENST00000573994 ATMINO43313 823 aaPredicted RBP13.17□□□□□ -0.3
RPA1-206ENST00000573994 CAMTA2O94983 1202 aa13.17□□□□□ -0.3
RPA1-206ENST00000573994 C7P10643 843 aa13.17□□□□□ -0.3
RPA1-206ENST00000573994 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
RPA1-206ENST00000573994 TBC1D9BQ66K14 1250 aa13.17□□□□□ -0.3
RPA1-206ENST00000573994 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
RPA1-206ENST00000573994 PRKRIP1Q9H875 184 aaPredicted RBP13.17□□□□□ -0.3
RPA1-206ENST00000573994 DLG5Q8TDM6 1919 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 SERPINB2P05120 415 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 KCNA3P22001 575 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 TIE1P35590 1138 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 RIPK4P57078 832 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 DZIP3Q86Y13 1208 aaKnown RBP13.16□□□□□ -0.3
RPA1-206ENST00000573994 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
RPA1-206ENST00000573994 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
RPA1-206ENST00000573994 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
RPA1-206ENST00000573994 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.3
RPA1-206ENST00000573994 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
RPA1-206ENST00000573994 PNISRQ8TF01 805 aaKnown RBP13.15□□□□□ -0.3
RPA1-206ENST00000573994 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.31
RPA1-206ENST00000573994 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
RPA1-206ENST00000573994 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
RPA1-206ENST00000573994 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
RPA1-206ENST00000573994 ZNF526Q8TF50 670 aaPredicted RBP13.14□□□□□ -0.31
RPA1-206ENST00000573994 TSPYL4Q9UJ04 414 aa13.14□□□□□ -0.31
RPA1-206ENST00000573994 ADCY9O60503 1353 aa13.14□□□□□ -0.31
RPA1-206ENST00000573994 NRXN2Q9P2S2 1712 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 LAMB4A4D0S4 1761 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 BCORQ6W2J9 1755 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 DALRD3Q5D0E6 543 aaKnown RBP13.13□□□□□ -0.31
RPA1-206ENST00000573994 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 PIM2Q9P1W9 311 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
RPA1-206ENST00000573994 AFDNP55196 1824 aaKnown RBP13.12□□□□□ -0.31
RPA1-206ENST00000573994 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
RPA1-206ENST00000573994 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 GSE1Q14687 1217 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 C2CD5Q86YS7 1000 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 RUNDC1Q96C34 613 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
RPA1-206ENST00000573994 BRCA1P38398 1863 aaKnown RBP13.11□□□□□ -0.31
RPA1-206ENST00000573994 NPHP1O15259 732 aa13.11□□□□□ -0.31
RPA1-206ENST00000573994 PRR5LQ6MZQ0 368 aa13.11□□□□□ -0.31
RPA1-206ENST00000573994 CNBD1Q8NA66 436 aa13.11□□□□□ -0.31
RPA1-206ENST00000573994 SETDB2Q96T68 719 aa13.11□□□□□ -0.31
RPA1-206ENST00000573994 MYL6BP14649 208 aa13.1□□□□□ -0.31
RPA1-206ENST00000573994 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
RPA1-206ENST00000573994 FAM177BA6PVY3 158 aa13.09□□□□□ -0.31
RPA1-206ENST00000573994 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
RPA1-206ENST00000573994 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
RPA1-206ENST00000573994 H0YIN7 160 aa13.08□□□□□ -0.32
RPA1-206ENST00000573994 ST5P78524 1137 aa13.08□□□□□ -0.32
RPA1-206ENST00000573994 RASSF7Q02833 373 aa13.08□□□□□ -0.32
RPA1-206ENST00000573994 HLFQ16534 295 aa13.08□□□□□ -0.32
RPA1-206ENST00000573994 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
RPA1-206ENST00000573994 NBPF5PQ86XG9 351 aaPredicted RBP13.08□□□□□ -0.32
RPA1-206ENST00000573994 GPBP1L1Q9HC44 474 aaPredicted RBP13.08□□□□□ -0.32
RPA1-206ENST00000573994 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
RPA1-206ENST00000573994 NIP7Q9Y221 180 aaKnown RBP eCLIP13.08□□□□□ -0.32
RPA1-206ENST00000573994 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
RPA1-206ENST00000573994 ZNF316A6NFI3 1004 aaPredicted RBP13.07□□□□□ -0.32
RPA1-206ENST00000573994 ANXA1P04083 346 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
RPA1-206ENST00000573994 ATN1P54259 1190 aaPredicted RBP13.07□□□□□ -0.32
RPA1-206ENST00000573994 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 CLEC4GQ6UXB4 293 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 KIF6Q6ZMV9 814 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 TTLL7Q6ZT98 887 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 TTLL6Q8N841 843 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 NECTIN2Q92692 538 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 ZNF622Q969S3 477 aaKnown RBP eCLIP13.07□□□□□ -0.32
RPA1-206ENST00000573994 BRIP1Q9BX63 1249 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
RPA1-206ENST00000573994 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms