RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 SNRPA1P09661 255 aaKnown RBP29.35■■■□□ 2.29
SNF8-216ENST00000573795 LAMB4A4D0S4 1761 aa29.34■■■□□ 2.29
SNF8-216ENST00000573795 NPM2Q86SE8 214 aaKnown RBP29.34■■■□□ 2.29
SNF8-216ENST00000573795 ZNF219Q9P2Y4 722 aaPredicted RBP29.34■■■□□ 2.29
SNF8-216ENST00000573795 NBPF26B4DH59 902 aa29.33■■■□□ 2.29
SNF8-216ENST00000573795 HTATSF1O43719 755 aaKnown RBP29.33■■■□□ 2.29
SNF8-216ENST00000573795 NBPF10Q6P3W6 841 aaKnown RBP29.33■■■□□ 2.29
SNF8-216ENST00000573795 NBPF15Q8N660 670 aa29.33■■■□□ 2.29
SNF8-216ENST00000573795 KDM3BQ7LBC6 1761 aa29.32■■■□□ 2.28
SNF8-216ENST00000573795 SRGNP10124 158 aa29.32■■■□□ 2.28
SNF8-216ENST00000573795 POTECB2RU33 542 aa29.31■■■□□ 2.28
SNF8-216ENST00000573795 ST5P78524 1137 aa29.31■■■□□ 2.28
SNF8-216ENST00000573795 SMC1BQ8NDV3 1235 aa29.31■■■□□ 2.28
SNF8-216ENST00000573795 VEGFAP15692 232 aaPredicted RBP29.3■■■□□ 2.28
SNF8-216ENST00000573795 STYK1Q6J9G0 422 aa29.3■■■□□ 2.28
SNF8-216ENST00000573795 CLEC4GQ6UXB4 293 aa29.3■■■□□ 2.28
SNF8-216ENST00000573795 KLRG1Q96E93 195 aa29.3■■■□□ 2.28
SNF8-216ENST00000573795 PCNTO95613 3336 aa29.3■■■□□ 2.28
SNF8-216ENST00000573795 LTBP3Q9NS15 1303 aa29.29■■■□□ 2.28
SNF8-216ENST00000573795 PRPF40BQ6NWY9 871 aaKnown RBP29.28■■■□□ 2.28
SNF8-216ENST00000573795 CNKSR1Q969H4 720 aa29.28■■■□□ 2.28
SNF8-216ENST00000573795 TAF7Q15545 349 aaPredicted RBP29.27■■■□□ 2.28
SNF8-216ENST00000573795 MASTLQ96GX5 879 aa29.27■■■□□ 2.28
SNF8-216ENST00000573795 MIS18AQ9NYP9 233 aa29.27■■■□□ 2.28
SNF8-216ENST00000573795 NPHP1O15259 732 aa29.26■■■□□ 2.27
SNF8-216ENST00000573795 NBPF5PQ86XG9 351 aaPredicted RBP29.26■■■□□ 2.27
SNF8-216ENST00000573795 ERFEQ4G0M1 354 aa29.25■■■□□ 2.27
SNF8-216ENST00000573795 JMYQ8N9B5 988 aa29.25■■■□□ 2.27
SNF8-216ENST00000573795 TAOK3Q9H2K8 898 aa29.25■■■□□ 2.27
SNF8-216ENST00000573795 ZNF652Q9Y2D9 606 aa29.25■■■□□ 2.27
SNF8-216ENST00000573795 RGL2O15211 777 aa29.24■■■□□ 2.27
SNF8-216ENST00000573795 KLRG2A4D1S0 409 aaPredicted RBP29.23■■■□□ 2.27
SNF8-216ENST00000573795 C7orf43Q8WVR3 580 aa29.23■■■□□ 2.27
SNF8-216ENST00000573795 PLEKHF1Q96S99 279 aa29.23■■■□□ 2.27
SNF8-216ENST00000573795 HLFQ16534 295 aa29.22■■■□□ 2.27
SNF8-216ENST00000573795 NIP7Q9Y221 180 aaKnown RBP eCLIP29.22■■■□□ 2.27
SNF8-216ENST00000573795 DPY19L2Q6NUT2 758 aa29.2■■■□□ 2.26
SNF8-216ENST00000573795 NUP98P52948 1817 aa29.2■■■□□ 2.26
SNF8-216ENST00000573795 SOGA3Q5TF21 947 aa29.19■■■□□ 2.26
SNF8-216ENST00000573795 NPR1P16066 1061 aa29.18■■■□□ 2.26
SNF8-216ENST00000573795 TPTE2Q6XPS3 522 aa29.17■■■□□ 2.26
SNF8-216ENST00000573795 THUMPD2Q9BTF0 503 aaKnown RBP29.17■■■□□ 2.26
SNF8-216ENST00000573795 FAM177BA6PVY3 158 aa29.16■■■□□ 2.26
SNF8-216ENST00000573795 DDNO94850 711 aaPredicted RBP29.16■■■□□ 2.26
SNF8-216ENST00000573795 NFE2L2Q16236 605 aa29.16■■■□□ 2.26
SNF8-216ENST00000573795 EIF4A1P60842 406 aaKnown RBP29.15■■■□□ 2.26
SNF8-216ENST00000573795 CCDC93Q567U6 631 aa29.15■■■□□ 2.26
SNF8-216ENST00000573795 OLFM4Q6UX06 510 aa29.15■■■□□ 2.26
SNF8-216ENST00000573795 PNISRQ8TF01 805 aaKnown RBP29.15■■■□□ 2.26
SNF8-216ENST00000573795 ABCC12Q96J65 1359 aa29.14■■■□□ 2.26
SNF8-216ENST00000573795 SNED1Q8TER0 1413 aa29.12■■■□□ 2.25
SNF8-216ENST00000573795 POTEIP0CG38 1075 aa29.12■■■□□ 2.25
SNF8-216ENST00000573795 POTEJP0CG39 1038 aa29.12■■■□□ 2.25
SNF8-216ENST00000573795 NEFMP07197 916 aa29.11■■■□□ 2.25
SNF8-216ENST00000573795 TTLL7Q6ZT98 887 aa29.11■■■□□ 2.25
SNF8-216ENST00000573795 NGEFQ8N5V2 710 aa29.11■■■□□ 2.25
SNF8-216ENST00000573795 MAP3K15Q6ZN16 1313 aa29.11■■■□□ 2.25
SNF8-216ENST00000573795 SCN4AP35499 1836 aa29.1■■■□□ 2.25
SNF8-216ENST00000573795 ERVV-1B6SEH8 477 aa29.1■■■□□ 2.25
SNF8-216ENST00000573795 FKBP4Q02790 459 aaKnown RBP eCLIP29.1■■■□□ 2.25
SNF8-216ENST00000573795 ZNF277Q9NRM2 450 aaPredicted RBP29.09■■■□□ 2.25
SNF8-216ENST00000573795 CRY2Q49AN0 593 aa29.08■■■□□ 2.25
SNF8-216ENST00000573795 NUTM1Q86Y26 1132 aa29.08■■■□□ 2.25
SNF8-216ENST00000573795 L3MBTL3Q96JM7 780 aaPredicted RBP29.08■■■□□ 2.25
SNF8-216ENST00000573795 RRP7AQ9Y3A4 280 aaKnown RBP29.08■■■□□ 2.25
SNF8-216ENST00000573795 UBN2Q6ZU65 1347 aa29.08■■■□□ 2.25
SNF8-216ENST00000573795 CHADLQ6NUI6 762 aa29.07■■■□□ 2.24
SNF8-216ENST00000573795 ZNF541Q9H0D2 1346 aa29.07■■■□□ 2.24
SNF8-216ENST00000573795 RIC1Q4ADV7 1423 aa29.06■■■□□ 2.24
SNF8-216ENST00000573795 IBTKQ9P2D0 1353 aaPredicted RBP29.06■■■□□ 2.24
SNF8-216ENST00000573795 MYL6BP14649 208 aa29.06■■■□□ 2.24
SNF8-216ENST00000573795 MAPK8IP3Q9UPT6 1336 aa29.05■■■□□ 2.24
SNF8-216ENST00000573795 COL13A1Q5TAT6 717 aaPredicted RBP29.05■■■□□ 2.24
SNF8-216ENST00000573795 NYXQ9GZU5 481 aa29.05■■■□□ 2.24
SNF8-216ENST00000573795 GTF2E1P29083 439 aaPredicted RBP29.04■■■□□ 2.24
SNF8-216ENST00000573795 ALDH1B1P30837 517 aa29.04■■■□□ 2.24
SNF8-216ENST00000573795 KIF6Q6ZMV9 814 aa29.04■■■□□ 2.24
SNF8-216ENST00000573795 RTKN2Q8IZC4 609 aa29.04■■■□□ 2.24
SNF8-216ENST00000573795 ZBTB3Q9H5J0 574 aa29.04■■■□□ 2.24
SNF8-216ENST00000573795 ADAMTSL1Q8N6G6 1762 aa29.03■■■□□ 2.24
SNF8-216ENST00000573795 GPTP24298 496 aa29.03■■■□□ 2.24
SNF8-216ENST00000573795 LRP10Q7Z4F1 713 aa29.03■■■□□ 2.24
SNF8-216ENST00000573795 TAF1DQ9H5J8 278 aaPredicted RBP29.03■■■□□ 2.24
SNF8-216ENST00000573795 COL4A5P29400 1685 aa29.02■■■□□ 2.24
SNF8-216ENST00000573795 ERBB4Q15303 1308 aa29.01■■■□□ 2.23
SNF8-216ENST00000573795 IQCA1LA6NCM1 817 aa29.01■■■□□ 2.23
SNF8-216ENST00000573795 SUSD4Q5VX71 490 aa29.01■■■□□ 2.23
SNF8-216ENST00000573795 SLC51AQ86UW1 340 aa29.01■■■□□ 2.23
SNF8-216ENST00000573795 ZNF34Q8IZ26 560 aa29.01■■■□□ 2.23
SNF8-216ENST00000573795 SYNE4Q8N205 404 aa29.01■■■□□ 2.23
SNF8-216ENST00000573795 PNNQ9H307 717 aaKnown RBP29.01■■■□□ 2.23
SNF8-216ENST00000573795 IARSP41252 1262 aaKnown RBP29■■■□□ 2.23
SNF8-216ENST00000573795 FZD9O00144 591 aa28.99■■■□□ 2.23
SNF8-216ENST00000573795 NTSR2O95665 410 aa28.99■■■□□ 2.23
SNF8-216ENST00000573795 HOXA10P31260 410 aaPredicted RBP28.99■■■□□ 2.23
SNF8-216ENST00000573795 PDIA6Q15084 440 aa28.99■■■□□ 2.23
SNF8-216ENST00000573795 LDHDQ86WU2 507 aa28.99■■■□□ 2.23
SNF8-216ENST00000573795 CREBZFQ9NS37 354 aa28.99■■■□□ 2.23
SNF8-216ENST00000573795 TSPYL4Q9UJ04 414 aa28.99■■■□□ 2.23
SNF8-216ENST00000573795 PASKQ96RG2 1323 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms