RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 CLUAP1Q96AJ1 413 aa12.23□□□□□ -0.45
NDE1-208ENST00000573694 FMNL2Q96PY5 1086 aa12.23□□□□□ -0.45
NDE1-208ENST00000573694 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
NDE1-208ENST00000573694 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
NDE1-208ENST00000573694 KIF13BQ9NQT8 1826 aa12.23□□□□□ -0.45
NDE1-208ENST00000573694 C10orf71Q711Q0 1435 aa12.22□□□□□ -0.45
NDE1-208ENST00000573694 TRIM27P14373 513 aa12.22□□□□□ -0.45
NDE1-208ENST00000573694 IL6STP40189 918 aaPredicted RBP12.22□□□□□ -0.45
NDE1-208ENST00000573694 EIF5P55010 431 aaKnown RBP12.22□□□□□ -0.45
NDE1-208ENST00000573694 CLEC4GQ6UXB4 293 aa12.21□□□□□ -0.45
NDE1-208ENST00000573694 DNAJC10Q8IXB1 793 aa12.21□□□□□ -0.45
NDE1-208ENST00000573694 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
NDE1-208ENST00000573694 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
NDE1-208ENST00000573694 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
NDE1-208ENST00000573694 HEG1Q9ULI3 1381 aa12.2□□□□□ -0.46
NDE1-208ENST00000573694 ZC3H4Q9UPT8 1303 aaKnown RBP12.2□□□□□ -0.46
NDE1-208ENST00000573694 ATF7IPQ6VMQ6 1270 aa12.2□□□□□ -0.46
NDE1-208ENST00000573694 FTSJ3Q8IY81 847 aaKnown RBP12.2□□□□□ -0.46
NDE1-208ENST00000573694 DZIP1LQ8IYY4 767 aaKnown RBP12.2□□□□□ -0.46
NDE1-208ENST00000573694 BABAM1Q9NWV8 329 aa12.2□□□□□ -0.46
NDE1-208ENST00000573694 GOLGB1Q14789 3259 aaKnown RBP12.19□□□□□ -0.46
NDE1-208ENST00000573694 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
NDE1-208ENST00000573694 C1QTNF8P60827 252 aa12.19□□□□□ -0.46
NDE1-208ENST00000573694 TAF7Q15545 349 aaPredicted RBP12.19□□□□□ -0.46
NDE1-208ENST00000573694 KCPQ6ZWJ8 1503 aa12.19□□□□□ -0.46
NDE1-208ENST00000573694 ADCY9O60503 1353 aa12.18□□□□□ -0.46
NDE1-208ENST00000573694 COL15A1P39059 1388 aa12.18□□□□□ -0.46
NDE1-208ENST00000573694 LAMB4A4D0S4 1761 aa12.18□□□□□ -0.46
NDE1-208ENST00000573694 KDM2BQ8NHM5 1336 aa12.18□□□□□ -0.46
NDE1-208ENST00000573694 C4AP0C0L4 1744 aa12.18□□□□□ -0.46
NDE1-208ENST00000573694 BTBD11A6QL63 1104 aa12.18□□□□□ -0.46
NDE1-208ENST00000573694 POLRMTO00411 1230 aaKnown RBP12.18□□□□□ -0.46
NDE1-208ENST00000573694 GIGYF1O75420 1035 aaPredicted RBP12.18□□□□□ -0.46
NDE1-208ENST00000573694 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
NDE1-208ENST00000573694 MVPQ14764 893 aaKnown RBP12.18□□□□□ -0.46
NDE1-208ENST00000573694 TMEM57Q8N5G2 664 aa12.18□□□□□ -0.46
NDE1-208ENST00000573694 ZNF496Q96IT1 587 aaPredicted RBP12.18□□□□□ -0.46
NDE1-208ENST00000573694 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
NDE1-208ENST00000573694 KCNQ3O43525 872 aa12.17□□□□□ -0.46
NDE1-208ENST00000573694 SLC39A6Q13433 755 aa12.17□□□□□ -0.46
NDE1-208ENST00000573694 DALRD3Q5D0E6 543 aaKnown RBP12.17□□□□□ -0.46
NDE1-208ENST00000573694 UBR2Q8IWV8 1755 aa12.17□□□□□ -0.46
NDE1-208ENST00000573694 TJP1Q07157 1748 aa12.17□□□□□ -0.46
NDE1-208ENST00000573694 ABCC4O15439 1325 aa12.16□□□□□ -0.46
NDE1-208ENST00000573694 IPO8O15397 1037 aaKnown RBP12.16□□□□□ -0.46
NDE1-208ENST00000573694 KCNA3P22001 575 aa12.16□□□□□ -0.46
NDE1-208ENST00000573694 USPL1Q5W0Q7 1092 aa12.16□□□□□ -0.46
NDE1-208ENST00000573694 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
NDE1-208ENST00000573694 GPBP1L1Q9HC44 474 aaPredicted RBP12.16□□□□□ -0.46
NDE1-208ENST00000573694 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
NDE1-208ENST00000573694 ZBTB1Q9Y2K1 713 aa12.16□□□□□ -0.46
NDE1-208ENST00000573694 MS4A1P11836 297 aa12.15□□□□□ -0.46
NDE1-208ENST00000573694 DPEP1P16444 411 aa12.15□□□□□ -0.46
NDE1-208ENST00000573694 PDE6BP35913 854 aa12.15□□□□□ -0.46
NDE1-208ENST00000573694 NFIXQ14938 502 aa12.15□□□□□ -0.46
NDE1-208ENST00000573694 BRIP1Q9BX63 1249 aa12.15□□□□□ -0.46
NDE1-208ENST00000573694 A0A0G2JLW4 131 aa12.14□□□□□ -0.47
NDE1-208ENST00000573694 SERPINB2P05120 415 aa12.14□□□□□ -0.47
NDE1-208ENST00000573694 EIF4A1P60842 406 aaKnown RBP12.14□□□□□ -0.47
NDE1-208ENST00000573694 DDR1Q08345 913 aa12.14□□□□□ -0.47
NDE1-208ENST00000573694 G2E3Q7L622 706 aa12.14□□□□□ -0.47
NDE1-208ENST00000573694 SKAP1Q86WV1 359 aa12.14□□□□□ -0.47
NDE1-208ENST00000573694 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
NDE1-208ENST00000573694 TSHZ2Q9NRE2 1034 aa12.14□□□□□ -0.47
NDE1-208ENST00000573694 BCS1LQ9Y276 419 aa12.14□□□□□ -0.47
NDE1-208ENST00000573694 ERBB4Q15303 1308 aa12.13□□□□□ -0.47
NDE1-208ENST00000573694 H0YIN7 160 aa12.13□□□□□ -0.47
NDE1-208ENST00000573694 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
NDE1-208ENST00000573694 SMIM5Q71RC9 77 aa12.13□□□□□ -0.47
NDE1-208ENST00000573694 ARHGAP45Q92619 1136 aa12.13□□□□□ -0.47
NDE1-208ENST00000573694 SETDB2Q96T68 719 aa12.13□□□□□ -0.47
NDE1-208ENST00000573694 SRP68Q9UHB9 627 aaKnown RBP12.13□□□□□ -0.47
NDE1-208ENST00000573694 PCDHB15Q9Y5E8 787 aa12.13□□□□□ -0.47
NDE1-208ENST00000573694 CARMIL3Q8ND23 1372 aa12.13□□□□□ -0.47
NDE1-208ENST00000573694 ATP10DQ9P241 1426 aa12.12□□□□□ -0.47
NDE1-208ENST00000573694 IGHDP01880 384 aa12.12□□□□□ -0.47
NDE1-208ENST00000573694 CENPQQ7L2Z9 268 aaPredicted RBP12.12□□□□□ -0.47
NDE1-208ENST00000573694 TTLL6Q8N841 843 aa12.12□□□□□ -0.47
NDE1-208ENST00000573694 API5Q9BZZ5 524 aaKnown RBP12.12□□□□□ -0.47
NDE1-208ENST00000573694 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
NDE1-208ENST00000573694 DDX19BQ9UMR2 479 aa12.12□□□□□ -0.47
NDE1-208ENST00000573694 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
NDE1-208ENST00000573694 ARFGEF1Q9Y6D6 1849 aa12.11□□□□□ -0.47
NDE1-208ENST00000573694 ERVV-1B6SEH8 477 aa12.11□□□□□ -0.47
NDE1-208ENST00000573694 GRIPAP1Q4V328 841 aa12.11□□□□□ -0.47
NDE1-208ENST00000573694 ARHGAP27Q6ZUM4 889 aa12.11□□□□□ -0.47
NDE1-208ENST00000573694 CHMP4AQ9BY43 222 aa12.11□□□□□ -0.47
NDE1-208ENST00000573694 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
NDE1-208ENST00000573694 HDGFL1Q5TGJ6 251 aa12.1□□□□□ -0.47
NDE1-208ENST00000573694 CCDC30Q5VVM6 783 aa12.1□□□□□ -0.47
NDE1-208ENST00000573694 TPTE2Q6XPS3 522 aa12.1□□□□□ -0.47
NDE1-208ENST00000573694 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
NDE1-208ENST00000573694 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
NDE1-208ENST00000573694 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
NDE1-208ENST00000573694 PTPRCP08575 1304 aa12.1□□□□□ -0.47
NDE1-208ENST00000573694 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
NDE1-208ENST00000573694 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
NDE1-208ENST00000573694 KLRG2A4D1S0 409 aaPredicted RBP12.09□□□□□ -0.47
NDE1-208ENST00000573694 TOMM70O94826 608 aa12.09□□□□□ -0.47
NDE1-208ENST00000573694 CAMTA2O94983 1202 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms