RNA–Protein interactions for RNA: ENST00000572686.1

SPOP-221, Transcript of speckle type BTB/POZ protein, humanhuman

Gene SPOP, Length 2,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-221ENST00000572686 CD44P16070 742 aaKnown RBP9.78□□□□□ -0.84
SPOP-221ENST00000572686 NMRK2Q9NPI5 230 aa9.78□□□□□ -0.84
SPOP-221ENST00000572686 DLEC1Q9Y238 1755 aa9.78□□□□□ -0.84
SPOP-221ENST00000572686 PPP2R1AP30153 589 aa9.77□□□□□ -0.84
SPOP-221ENST00000572686 IL17REQ8NFR9 667 aa9.77□□□□□ -0.84
SPOP-221ENST00000572686 U2SURPO15042 1029 aaKnown RBP9.77□□□□□ -0.85
SPOP-221ENST00000572686 TOMM70O94826 608 aa9.77□□□□□ -0.85
SPOP-221ENST00000572686 GNAT3A8MTJ3 354 aa9.76□□□□□ -0.85
SPOP-221ENST00000572686 SERPINB2P05120 415 aa9.76□□□□□ -0.85
SPOP-221ENST00000572686 CANXP27824 592 aaKnown RBP9.76□□□□□ -0.85
SPOP-221ENST00000572686 EIF5P55010 431 aaKnown RBP9.76□□□□□ -0.85
SPOP-221ENST00000572686 ZNF496Q96IT1 587 aaPredicted RBP9.76□□□□□ -0.85
SPOP-221ENST00000572686 CCDC88AQ3V6T2 1871 aa9.76□□□□□ -0.85
SPOP-221ENST00000572686 TTC5Q8N0Z6 440 aa9.76□□□□□ -0.85
SPOP-221ENST00000572686 GAS2L2Q8NHY3 880 aa9.76□□□□□ -0.85
SPOP-221ENST00000572686 RNF181Q9P0P0 153 aa9.76□□□□□ -0.85
SPOP-221ENST00000572686 SALL2Q9Y467 1007 aaPredicted RBP9.76□□□□□ -0.85
SPOP-221ENST00000572686 HEG1Q9ULI3 1381 aa9.75□□□□□ -0.85
SPOP-221ENST00000572686 ANKRD31Q8N7Z5 1873 aa9.75□□□□□ -0.85
SPOP-221ENST00000572686 STARD3NLO95772 234 aa9.75□□□□□ -0.85
SPOP-221ENST00000572686 TEFQ10587 303 aa9.75□□□□□ -0.85
SPOP-221ENST00000572686 ZNF790Q6PG37 636 aa9.75□□□□□ -0.85
SPOP-221ENST00000572686 SCN7AQ01118 1682 aa9.75□□□□□ -0.85
SPOP-221ENST00000572686 PHACTR3Q96KR7 559 aa9.74□□□□□ -0.85
SPOP-221ENST00000572686 ADAMTS8Q9UP79 889 aa9.74□□□□□ -0.85
SPOP-221ENST00000572686 CARMIL3Q8ND23 1372 aa9.74□□□□□ -0.85
SPOP-221ENST00000572686 CEMIPQ8WUJ3 1361 aa9.74□□□□□ -0.85
SPOP-221ENST00000572686 APLP1P51693 650 aa9.74□□□□□ -0.85
SPOP-221ENST00000572686 B4GALNT3Q6L9W6 998 aa9.74□□□□□ -0.85
SPOP-221ENST00000572686 TNRC6CQ9HCJ0 1690 aaKnown RBP9.74□□□□□ -0.85
SPOP-221ENST00000572686 A0A087WZG4 1122 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 PRELPP51888 382 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 RASSF7Q02833 373 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 TBC1D9BQ66K14 1250 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 BICDL1Q6ZP65 573 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 DNAJC5GQ8N7S2 189 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 RBM46Q8TBY0 533 aaKnown RBP9.73□□□□□ -0.85
SPOP-221ENST00000572686 TEX13AQ9BXU3 409 aaPredicted RBP9.73□□□□□ -0.85
SPOP-221ENST00000572686 RSPH6AQ9H0K4 717 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 WDR90Q96KV7 1748 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 KCNQ3O43525 872 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 PRKAR2BP31323 418 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 IFFO2Q5TF58 517 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 C2CD5Q86YS7 1000 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 TTLL6Q8N841 843 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 TBC1D2BQ9UPU7 963 aa9.73□□□□□ -0.85
SPOP-221ENST00000572686 KDM2BQ8NHM5 1336 aa9.72□□□□□ -0.85
SPOP-221ENST00000572686 COL11A2P13942 1736 aaPredicted RBP9.72□□□□□ -0.85
SPOP-221ENST00000572686 A1BGP04217 495 aa9.72□□□□□ -0.85
SPOP-221ENST00000572686 IL6STP40189 918 aaPredicted RBP9.72□□□□□ -0.85
SPOP-221ENST00000572686 WDR43Q15061 677 aaKnown RBP eCLIP9.72□□□□□ -0.85
SPOP-221ENST00000572686 CDCA7LQ96GN5 454 aa9.72□□□□□ -0.85
SPOP-221ENST00000572686 FMNL2Q96PY5 1086 aa9.72□□□□□ -0.85
SPOP-221ENST00000572686 RRAGCQ9HB90 399 aa9.72□□□□□ -0.85
SPOP-221ENST00000572686 RBM19Q9Y4C8 960 aaKnown RBP9.72□□□□□ -0.85
SPOP-221ENST00000572686 BCORQ6W2J9 1755 aa9.72□□□□□ -0.85
SPOP-221ENST00000572686 H0YIN7 160 aa9.71□□□□□ -0.85
SPOP-221ENST00000572686 CFAP53Q96M91 514 aa9.71□□□□□ -0.85
SPOP-221ENST00000572686 RCAN3Q9UKA8 241 aa9.71□□□□□ -0.85
SPOP-221ENST00000572686 TIAM2Q8IVF5 1701 aa9.71□□□□□ -0.85
SPOP-221ENST00000572686 BTBD11A6QL63 1104 aa9.71□□□□□ -0.86
SPOP-221ENST00000572686 LMNB1P20700 586 aa9.71□□□□□ -0.86
SPOP-221ENST00000572686 C16orf71Q8IYS4 520 aaPredicted RBP9.71□□□□□ -0.86
SPOP-221ENST00000572686 FER1L6Q2WGJ9 1857 aa9.71□□□□□ -0.86
SPOP-221ENST00000572686 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
SPOP-221ENST00000572686 DICER1Q9UPY3 1922 aaKnown RBP9.7□□□□□ -0.86
SPOP-221ENST00000572686 CACNA1SQ13698 1873 aa9.7□□□□□ -0.86
SPOP-221ENST00000572686 NFKBIEO00221 500 aa9.7□□□□□ -0.86
SPOP-221ENST00000572686 CAMTA2O94983 1202 aa9.7□□□□□ -0.86
SPOP-221ENST00000572686 FSTL1Q12841 308 aa9.7□□□□□ -0.86
SPOP-221ENST00000572686 PRR5LQ6MZQ0 368 aa9.7□□□□□ -0.86
SPOP-221ENST00000572686 CCDC24Q8N4L8 307 aa9.7□□□□□ -0.86
SPOP-221ENST00000572686 BRIP1Q9BX63 1249 aa9.7□□□□□ -0.86
SPOP-221ENST00000572686 ZNF330Q9Y3S2 320 aaPredicted RBP9.7□□□□□ -0.86
SPOP-221ENST00000572686 USP16Q9Y5T5 823 aa9.7□□□□□ -0.86
SPOP-221ENST00000572686 RRP1P56182 461 aaKnown RBP9.7□□□□□ -0.86
SPOP-221ENST00000572686 PRAMEF22A3QJZ6 481 aa9.69□□□□□ -0.86
SPOP-221ENST00000572686 U2AF1L5P0DN76 240 aaPredicted RBP9.69□□□□□ -0.86
SPOP-221ENST00000572686 HTRA3P83110 453 aa9.69□□□□□ -0.86
SPOP-221ENST00000572686 U2AF1Q01081 240 aaKnown RBP eCLIP9.69□□□□□ -0.86
SPOP-221ENST00000572686 PDZRN3Q9UPQ7 1066 aa9.69□□□□□ -0.86
SPOP-221ENST00000572686 SLX4Q8IY92 1834 aa9.69□□□□□ -0.86
SPOP-221ENST00000572686 ARFGEF2Q9Y6D5 1785 aa9.68□□□□□ -0.86
SPOP-221ENST00000572686 GLTPD2A6NH11 291 aa9.68□□□□□ -0.86
SPOP-221ENST00000572686 PDE6BP35913 854 aa9.68□□□□□ -0.86
SPOP-221ENST00000572686 PIP4K2AP48426 406 aaPredicted RBP9.68□□□□□ -0.86
SPOP-221ENST00000572686 MCM10Q7L590 875 aa9.68□□□□□ -0.86
SPOP-221ENST00000572686 ZNF622Q969S3 477 aaKnown RBP eCLIP9.68□□□□□ -0.86
SPOP-221ENST00000572686 SETDB2Q96T68 719 aa9.68□□□□□ -0.86
SPOP-221ENST00000572686 DLG5Q8TDM6 1919 aa9.68□□□□□ -0.86
SPOP-221ENST00000572686 DCTN1Q14203 1278 aa9.68□□□□□ -0.86
SPOP-221ENST00000572686 DZIP3Q86Y13 1208 aaKnown RBP9.68□□□□□ -0.86
SPOP-221ENST00000572686 C21orf2O43822 256 aa9.67□□□□□ -0.86
SPOP-221ENST00000572686 NPM2Q86SE8 214 aaKnown RBP9.67□□□□□ -0.86
SPOP-221ENST00000572686 CCDC136Q96JN2 1154 aa9.67□□□□□ -0.86
SPOP-221ENST00000572686 SNRPA1P09661 255 aaKnown RBP9.67□□□□□ -0.86
SPOP-221ENST00000572686 VEGFAP15692 232 aaPredicted RBP9.67□□□□□ -0.86
SPOP-221ENST00000572686 CNBD1Q8NA66 436 aa9.67□□□□□ -0.86
SPOP-221ENST00000572686 RTF1Q92541 710 aaKnown RBP9.67□□□□□ -0.86
SPOP-221ENST00000572686 POTECB2RU33 542 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms