RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 TAOK3Q9H2K8 898 aa21.57■■□□□ 1.04
HCFC1R1-203ENST00000572355 HSPA1AP0DMV8 641 aaKnown RBP21.55■■□□□ 1.04
HCFC1R1-203ENST00000572355 HSPA1BP0DMV9 641 aaKnown RBP21.55■■□□□ 1.04
HCFC1R1-203ENST00000572355 PRPF40BQ6NWY9 871 aaKnown RBP21.55■■□□□ 1.04
HCFC1R1-203ENST00000572355 TNS4Q8IZW8 715 aa21.55■■□□□ 1.04
HCFC1R1-203ENST00000572355 CNKSR1Q969H4 720 aa21.55■■□□□ 1.04
HCFC1R1-203ENST00000572355 PHACTR3Q96KR7 559 aa21.55■■□□□ 1.04
HCFC1R1-203ENST00000572355 LTBP3Q9NS15 1303 aa21.55■■□□□ 1.04
HCFC1R1-203ENST00000572355 SRGNP10124 158 aa21.53■■□□□ 1.04
HCFC1R1-203ENST00000572355 STYK1Q6J9G0 422 aa21.53■■□□□ 1.04
HCFC1R1-203ENST00000572355 CFAP53Q96M91 514 aa21.53■■□□□ 1.04
HCFC1R1-203ENST00000572355 RSPH6AQ9H0K4 717 aa21.53■■□□□ 1.04
HCFC1R1-203ENST00000572355 PRAMEF22A3QJZ6 481 aa21.52■■□□□ 1.04
HCFC1R1-203ENST00000572355 DDNO94850 711 aaPredicted RBP21.52■■□□□ 1.04
HCFC1R1-203ENST00000572355 MASTLQ96GX5 879 aa21.52■■□□□ 1.04
HCFC1R1-203ENST00000572355 USP16Q9Y5T5 823 aa21.52■■□□□ 1.04
HCFC1R1-203ENST00000572355 PCNTO95613 3336 aa21.51■■□□□ 1.03
HCFC1R1-203ENST00000572355 POTEIP0CG38 1075 aa21.51■■□□□ 1.03
HCFC1R1-203ENST00000572355 POTEJP0CG39 1038 aa21.51■■□□□ 1.03
HCFC1R1-203ENST00000572355 NBPF5PQ86XG9 351 aaPredicted RBP21.51■■□□□ 1.03
HCFC1R1-203ENST00000572355 SOGA3Q5TF21 947 aa21.5■■□□□ 1.03
HCFC1R1-203ENST00000572355 CHADLQ6NUI6 762 aa21.5■■□□□ 1.03
HCFC1R1-203ENST00000572355 MCM10Q7L590 875 aa21.49■■□□□ 1.03
HCFC1R1-203ENST00000572355 RTF1Q92541 710 aaKnown RBP21.49■■□□□ 1.03
HCFC1R1-203ENST00000572355 ZNF652Q9Y2D9 606 aa21.49■■□□□ 1.03
HCFC1R1-203ENST00000572355 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
HCFC1R1-203ENST00000572355 NUDCQ9Y266 331 aa21.48■■□□□ 1.03
HCFC1R1-203ENST00000572355 SNRPA1P09661 255 aaKnown RBP21.47■■□□□ 1.03
HCFC1R1-203ENST00000572355 U2AF1L5P0DN76 240 aaPredicted RBP21.47■■□□□ 1.03
HCFC1R1-203ENST00000572355 U2AF1Q01081 240 aaKnown RBP eCLIP21.47■■□□□ 1.03
HCFC1R1-203ENST00000572355 CCDC93Q567U6 631 aa21.47■■□□□ 1.03
HCFC1R1-203ENST00000572355 MKRN1Q9UHC7 482 aaKnown RBP21.47■■□□□ 1.03
HCFC1R1-203ENST00000572355 SCN4AP35499 1836 aa21.47■■□□□ 1.03
HCFC1R1-203ENST00000572355 FAM177BA6PVY3 158 aa21.46■■□□□ 1.03
HCFC1R1-203ENST00000572355 DCTN1Q14203 1278 aa21.46■■□□□ 1.03
HCFC1R1-203ENST00000572355 CLEC4GQ6UXB4 293 aa21.46■■□□□ 1.03
HCFC1R1-203ENST00000572355 CREBZFQ9NS37 354 aa21.46■■□□□ 1.03
HCFC1R1-203ENST00000572355 NPR1P16066 1061 aa21.45■■□□□ 1.02
HCFC1R1-203ENST00000572355 NIP7Q9Y221 180 aaKnown RBP eCLIP21.45■■□□□ 1.02
HCFC1R1-203ENST00000572355 IQCA1LA6NCM1 817 aa21.44■■□□□ 1.02
HCFC1R1-203ENST00000572355 NBPF26B4DH59 902 aa21.43■■□□□ 1.02
HCFC1R1-203ENST00000572355 NBPF10Q6P3W6 841 aaKnown RBP21.43■■□□□ 1.02
HCFC1R1-203ENST00000572355 OLFM4Q6UX06 510 aa21.43■■□□□ 1.02
HCFC1R1-203ENST00000572355 NBPF15Q8N660 670 aa21.43■■□□□ 1.02
HCFC1R1-203ENST00000572355 C7orf43Q8WVR3 580 aa21.43■■□□□ 1.02
HCFC1R1-203ENST00000572355 ZNF277Q9NRM2 450 aaPredicted RBP21.43■■□□□ 1.02
HCFC1R1-203ENST00000572355 ZNF541Q9H0D2 1346 aa21.43■■□□□ 1.02
HCFC1R1-203ENST00000572355 FKBP4Q02790 459 aaKnown RBP eCLIP21.42■■□□□ 1.02
HCFC1R1-203ENST00000572355 TPTE2Q6XPS3 522 aa21.42■■□□□ 1.02
HCFC1R1-203ENST00000572355 LDHDQ86WU2 507 aa21.42■■□□□ 1.02
HCFC1R1-203ENST00000572355 PPP2R1AP30153 589 aa21.41■■□□□ 1.02
HCFC1R1-203ENST00000572355 L3MBTL3Q96JM7 780 aaPredicted RBP21.41■■□□□ 1.02
HCFC1R1-203ENST00000572355 TAF1DQ9H5J8 278 aaPredicted RBP21.41■■□□□ 1.02
HCFC1R1-203ENST00000572355 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
HCFC1R1-203ENST00000572355 EAPPQ56P03 285 aaPredicted RBP21.4■■□□□ 1.02
HCFC1R1-203ENST00000572355 CNTNAP1P78357 1384 aa21.39■■□□□ 1.02
HCFC1R1-203ENST00000572355 KDM3BQ7LBC6 1761 aa21.39■■□□□ 1.01
HCFC1R1-203ENST00000572355 KLRG2A4D1S0 409 aaPredicted RBP21.39■■□□□ 1.01
HCFC1R1-203ENST00000572355 HLFQ16534 295 aa21.39■■□□□ 1.01
HCFC1R1-203ENST00000572355 ADAMTSL1Q8N6G6 1762 aa21.38■■□□□ 1.01
HCFC1R1-203ENST00000572355 PASKQ96RG2 1323 aa21.38■■□□□ 1.01
HCFC1R1-203ENST00000572355 GTF2E1P29083 439 aaPredicted RBP21.38■■□□□ 1.01
HCFC1R1-203ENST00000572355 MIS18AQ9NYP9 233 aa21.38■■□□□ 1.01
HCFC1R1-203ENST00000572355 ABCC12Q96J65 1359 aa21.37■■□□□ 1.01
HCFC1R1-203ENST00000572355 NUP98P52948 1817 aa21.37■■□□□ 1.01
HCFC1R1-203ENST00000572355 RTKN2Q8IZC4 609 aa21.37■■□□□ 1.01
HCFC1R1-203ENST00000572355 NGEFQ8N5V2 710 aa21.37■■□□□ 1.01
HCFC1R1-203ENST00000572355 HACL1Q9UJ83 578 aa21.37■■□□□ 1.01
HCFC1R1-203ENST00000572355 RNF123Q5XPI4 1314 aa21.36■■□□□ 1.01
HCFC1R1-203ENST00000572355 RGL2O15211 777 aa21.36■■□□□ 1.01
HCFC1R1-203ENST00000572355 HTATSF1O43719 755 aaKnown RBP21.36■■□□□ 1.01
HCFC1R1-203ENST00000572355 IARSP41252 1262 aaKnown RBP21.36■■□□□ 1.01
HCFC1R1-203ENST00000572355 TAF7Q15545 349 aaPredicted RBP21.36■■□□□ 1.01
HCFC1R1-203ENST00000572355 CLEC11AQ9Y240 323 aa21.36■■□□□ 1.01
HCFC1R1-203ENST00000572355 ALDH1B1P30837 517 aa21.35■■□□□ 1.01
HCFC1R1-203ENST00000572355 EPHX2P34913 555 aa21.35■■□□□ 1.01
HCFC1R1-203ENST00000572355 TMEM88BA6NKF7 163 aa21.34■■□□□ 1.01
HCFC1R1-203ENST00000572355 FOXN1O15353 648 aa21.34■■□□□ 1.01
HCFC1R1-203ENST00000572355 NUTM1Q86Y26 1132 aa21.34■■□□□ 1.01
HCFC1R1-203ENST00000572355 SYNE4Q8N205 404 aa21.34■■□□□ 1.01
HCFC1R1-203ENST00000572355 SNED1Q8TER0 1413 aa21.32■■□□□ 1
HCFC1R1-203ENST00000572355 ITGBL1O95965 494 aaPredicted RBP21.32■■□□□ 1
HCFC1R1-203ENST00000572355 NYXQ9GZU5 481 aa21.32■■□□□ 1
HCFC1R1-203ENST00000572355 COL4A5P29400 1685 aa21.31■■□□□ 1
HCFC1R1-203ENST00000572355 FZD9O00144 591 aa21.31■■□□□ 1
HCFC1R1-203ENST00000572355 NEFMP07197 916 aa21.31■■□□□ 1
HCFC1R1-203ENST00000572355 VEGFBP49765 207 aa21.31■■□□□ 1
HCFC1R1-203ENST00000572355 KIF6Q6ZMV9 814 aa21.31■■□□□ 1
HCFC1R1-203ENST00000572355 RPGRQ92834 1020 aaKnown RBP21.31■■□□□ 1
HCFC1R1-203ENST00000572355 RRP7AQ9Y3A4 280 aaKnown RBP21.31■■□□□ 1
HCFC1R1-203ENST00000572355 MAP3K15Q6ZN16 1313 aa21.3■■□□□ 1
HCFC1R1-203ENST00000572355 MYL6BP14649 208 aa21.3■■□□□ 1
HCFC1R1-203ENST00000572355 GPTP24298 496 aa21.3■■□□□ 1
HCFC1R1-203ENST00000572355 CRY2Q49AN0 593 aa21.3■■□□□ 1
HCFC1R1-203ENST00000572355 MAP1SQ66K74 1059 aaPredicted RBP21.3■■□□□ 1
HCFC1R1-203ENST00000572355 TTLL7Q6ZT98 887 aa21.3■■□□□ 1
HCFC1R1-203ENST00000572355 JDP2Q8WYK2 163 aa21.3■■□□□ 1
HCFC1R1-203ENST00000572355 AIDAQ96BJ3 306 aa21.3■■□□□ 1
HCFC1R1-203ENST00000572355 PSMD1Q99460 953 aa21.3■■□□□ 1
HCFC1R1-203ENST00000572355 LTBP1Q14766 1721 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms