RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-208	ENST00000572351	G2E3	Q7L622	706 aa		12.04	□□□□□ -0.48
NPLOC4-208	ENST00000572351	RIC3	Q7Z5B4	369 aa		12.04	□□□□□ -0.48
NPLOC4-208	ENST00000572351	FRAT1	Q92837	279 aa	Predicted RBP	12.04	□□□□□ -0.48
NPLOC4-208	ENST00000572351	ZBTB3	Q9H5J0	574 aa		12.04	□□□□□ -0.48
NPLOC4-208	ENST00000572351	NARF	Q9UHQ1	456 aa		12.04	□□□□□ -0.48
NPLOC4-208	ENST00000572351	KIF16B	Q96L93	1317 aa		12.04	□□□□□ -0.48
NPLOC4-208	ENST00000572351	RREB1	Q92766	1687 aa		12.03	□□□□□ -0.48
NPLOC4-208	ENST00000572351	IPO8	O15397	1037 aa	Known RBP	12.03	□□□□□ -0.48
NPLOC4-208	ENST00000572351	USPL1	Q5W0Q7	1092 aa		12.03	□□□□□ -0.48
NPLOC4-208	ENST00000572351	LRP10	Q7Z4F1	713 aa		12.03	□□□□□ -0.48
NPLOC4-208	ENST00000572351	SRP68	Q9UHB9	627 aa	Known RBP	12.03	□□□□□ -0.48
NPLOC4-208	ENST00000572351	NOB1	Q9ULX3	412 aa	Known RBP	12.03	□□□□□ -0.48
NPLOC4-208	ENST00000572351	PTPRC	P08575	1304 aa		12.03	□□□□□ -0.48
NPLOC4-208	ENST00000572351	MAP3K15	Q6ZN16	1313 aa		12.03	□□□□□ -0.48
NPLOC4-208	ENST00000572351	USP42	Q9H9J4	1324 aa	Known RBP	12.03	□□□□□ -0.48
NPLOC4-208	ENST00000572351	LAMB4	A4D0S4	1761 aa		12.02	□□□□□ -0.48
NPLOC4-208	ENST00000572351	CAMTA2	O94983	1202 aa		12.02	□□□□□ -0.49
NPLOC4-208	ENST00000572351	PLBD2	Q8NHP8	589 aa		12.02	□□□□□ -0.49
NPLOC4-208	ENST00000572351	MAP3K2	Q9Y2U5	619 aa		12.02	□□□□□ -0.49
NPLOC4-208	ENST00000572351	NUP188	Q5SRE5	1749 aa		12.02	□□□□□ -0.49
NPLOC4-208	ENST00000572351	COL5A3	P25940	1745 aa	Predicted RBP	12.01	□□□□□ -0.49
NPLOC4-208	ENST00000572351	PI4KAP2	A4QPH2	592 aa		12.01	□□□□□ -0.49
NPLOC4-208	ENST00000572351	ERVV-1	B6SEH8	477 aa		12.01	□□□□□ -0.49
NPLOC4-208	ENST00000572351	HSP90AB3P	Q58FF7	597 aa		12.01	□□□□□ -0.49
NPLOC4-208	ENST00000572351	KSR2	Q6VAB6	950 aa		12.01	□□□□□ -0.49
NPLOC4-208	ENST00000572351	PI4KAP1	Q8N8J0	262 aa		12.01	□□□□□ -0.49
NPLOC4-208	ENST00000572351	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.01	□□□□□ -0.49
NPLOC4-208	ENST00000572351	API5	Q9BZZ5	524 aa	Known RBP	12.01	□□□□□ -0.49
NPLOC4-208	ENST00000572351	ZBTB7A	O95365	584 aa		12	□□□□□ -0.49
NPLOC4-208	ENST00000572351	BRPF1	P55201	1214 aa	Predicted RBP	12	□□□□□ -0.49
NPLOC4-208	ENST00000572351	NEXN	Q0ZGT2	675 aa		12	□□□□□ -0.49
NPLOC4-208	ENST00000572351	ZKSCAN2	Q63HK3	967 aa		12	□□□□□ -0.49
NPLOC4-208	ENST00000572351	MSL1	Q68DK7	614 aa		12	□□□□□ -0.49
NPLOC4-208	ENST00000572351	SLC4A10	Q6U841	1118 aa		12	□□□□□ -0.49
NPLOC4-208	ENST00000572351	BICDL1	Q6ZP65	573 aa		12	□□□□□ -0.49
NPLOC4-208	ENST00000572351	NLGN1	Q8N2Q7	840 aa		12	□□□□□ -0.49
NPLOC4-208	ENST00000572351	SLC16A10	Q8TF71	515 aa		12	□□□□□ -0.49
NPLOC4-208	ENST00000572351		F6X3S4	739 aa		11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351	GYS1	P13807	737 aa		11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351	FKBP8	Q14318	412 aa		11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351	HLF	Q16534	295 aa		11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351	CLEC4G	Q6UXB4	293 aa		11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351	FTSJ3	Q8IY81	847 aa	Known RBP	11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351	DNAAF4	Q8WXU2	420 aa		11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351	MYD88	Q99836	296 aa		11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351		U3KPZ7	1027 aa	Predicted RBP	11.99	□□□□□ -0.49
NPLOC4-208	ENST00000572351	RGL2	O15211	777 aa		11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	NPHP1	O15259	732 aa		11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	MYCN	P04198	464 aa	Predicted RBP	11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	GPT	P24298	496 aa		11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	TCIRG1	Q13488	830 aa		11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	ATF7IP	Q6VMQ6	1270 aa		11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	ARHGAP45	Q92619	1136 aa		11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	SETDB2	Q96T68	719 aa		11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	METTL22	Q9BUU2	404 aa	Predicted RBP	11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	MTFR1L	Q9H019	292 aa		11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	BCL2L12	Q9HB09	334 aa		11.98	□□□□□ -0.49
NPLOC4-208	ENST00000572351	ADCY9	O60503	1353 aa		11.97	□□□□□ -0.49
NPLOC4-208	ENST00000572351	ATP5J2-PTCD1	G3V325	749 aa		11.97	□□□□□ -0.49
NPLOC4-208	ENST00000572351	MS4A1	P11836	297 aa		11.97	□□□□□ -0.49
NPLOC4-208	ENST00000572351	POLD1	P28340	1107 aa		11.97	□□□□□ -0.49
NPLOC4-208	ENST00000572351	TBC1D9B	Q66K14	1250 aa		11.97	□□□□□ -0.49
NPLOC4-208	ENST00000572351	CLUAP1	Q96AJ1	413 aa		11.97	□□□□□ -0.49
NPLOC4-208	ENST00000572351	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.97	□□□□□ -0.49
NPLOC4-208	ENST00000572351	TAF1L	Q8IZX4	1826 aa		11.96	□□□□□ -0.49
NPLOC4-208	ENST00000572351	FAM177B	A6PVY3	158 aa		11.96	□□□□□ -0.49
NPLOC4-208	ENST00000572351	PLIN1	O60240	522 aa		11.96	□□□□□ -0.49
NPLOC4-208	ENST00000572351	MMP10	P09238	476 aa		11.96	□□□□□ -0.49
NPLOC4-208	ENST00000572351	TRIM27	P14373	513 aa		11.96	□□□□□ -0.49
NPLOC4-208	ENST00000572351	GTF2E1	P29083	439 aa	Predicted RBP	11.96	□□□□□ -0.49
NPLOC4-208	ENST00000572351	NFIX	Q14938	502 aa		11.96	□□□□□ -0.49
NPLOC4-208	ENST00000572351	PARP3	Q9Y6F1	533 aa		11.96	□□□□□ -0.49
NPLOC4-208	ENST00000572351	CCT4	P50991	539 aa	Known RBP	11.95	□□□□□ -0.5
NPLOC4-208	ENST00000572351	RRP1	P56182	461 aa	Known RBP	11.95	□□□□□ -0.5
NPLOC4-208	ENST00000572351	PARP10	Q53GL7	1025 aa		11.95	□□□□□ -0.5
NPLOC4-208	ENST00000572351	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.95	□□□□□ -0.5
NPLOC4-208	ENST00000572351	DZIP1L	Q8IYY4	767 aa	Known RBP	11.95	□□□□□ -0.5
NPLOC4-208	ENST00000572351	ZNF34	Q8IZ26	560 aa		11.95	□□□□□ -0.5
NPLOC4-208	ENST00000572351	LINS1	Q8NG48	757 aa		11.95	□□□□□ -0.5
NPLOC4-208	ENST00000572351	SRCIN1	Q9C0H9	1055 aa		11.95	□□□□□ -0.5
NPLOC4-208	ENST00000572351	CWC25	Q9NXE8	425 aa	Predicted RBP	11.95	□□□□□ -0.5
NPLOC4-208	ENST00000572351	ATP10D	Q9P241	1426 aa		11.94	□□□□□ -0.5
NPLOC4-208	ENST00000572351	CARMIL3	Q8ND23	1372 aa		11.94	□□□□□ -0.5
NPLOC4-208	ENST00000572351	CWF19L2	Q2TBE0	894 aa	Known RBP	11.94	□□□□□ -0.5
NPLOC4-208	ENST00000572351	BEND3	Q5T5X7	828 aa		11.94	□□□□□ -0.5
NPLOC4-208	ENST00000572351	PPP1R42	Q7Z4L9	355 aa		11.94	□□□□□ -0.5
NPLOC4-208	ENST00000572351	NLRP10	Q86W26	655 aa		11.94	□□□□□ -0.5
NPLOC4-208	ENST00000572351	ISCA1	Q9BUE6	129 aa		11.94	□□□□□ -0.5
NPLOC4-208	ENST00000572351	UTP14A	Q9BVJ6	771 aa	Known RBP	11.94	□□□□□ -0.5
NPLOC4-208	ENST00000572351	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.94	□□□□□ -0.5
NPLOC4-208	ENST00000572351	ABCC4	O15439	1325 aa		11.93	□□□□□ -0.5
NPLOC4-208	ENST00000572351	UBN2	Q6ZU65	1347 aa		11.93	□□□□□ -0.5
NPLOC4-208	ENST00000572351	MYH14	Q7Z406	1995 aa	Known RBP	11.93	□□□□□ -0.5
NPLOC4-208	ENST00000572351	NEURL1B	A8MQ27	555 aa		11.93	□□□□□ -0.5
NPLOC4-208	ENST00000572351	ALDH1L1	O75891	902 aa		11.93	□□□□□ -0.5
NPLOC4-208	ENST00000572351	SERPINB2	P05120	415 aa		11.93	□□□□□ -0.5
NPLOC4-208	ENST00000572351	IGKV5-2	P06315	115 aa		11.93	□□□□□ -0.5

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