RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 CYP4F22Q6NT55 531 aa18.01■□□□□ 0.47
CCDC40-208ENST00000572270 CCDC24Q8N4L8 307 aa18.01■□□□□ 0.47
CCDC40-208ENST00000572270 PDE4DIPQ5VU43 2346 aa18.01■□□□□ 0.47
CCDC40-208ENST00000572270 SCN7AQ01118 1682 aa18■□□□□ 0.47
CCDC40-208ENST00000572270 A0A087WZG4 1122 aa18■□□□□ 0.47
CCDC40-208ENST00000572270 CA12O43570 354 aa18■□□□□ 0.47
CCDC40-208ENST00000572270 CANXP27824 592 aaKnown RBP18■□□□□ 0.47
CCDC40-208ENST00000572270 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
CCDC40-208ENST00000572270 CCDC93Q567U6 631 aa18■□□□□ 0.47
CCDC40-208ENST00000572270 TBC1D9BQ66K14 1250 aa18■□□□□ 0.47
CCDC40-208ENST00000572270 ST5P78524 1137 aa17.99■□□□□ 0.47
CCDC40-208ENST00000572270 DGKZQ13574 1117 aa17.99■□□□□ 0.47
CCDC40-208ENST00000572270 MASTLQ96GX5 879 aa17.99■□□□□ 0.47
CCDC40-208ENST00000572270 MAP2K2P36507 400 aa17.98■□□□□ 0.47
CCDC40-208ENST00000572270 CNBD1Q8NA66 436 aa17.98■□□□□ 0.47
CCDC40-208ENST00000572270 SLC52A2Q9HAB3 445 aa17.98■□□□□ 0.47
CCDC40-208ENST00000572270 TRPM7Q96QT4 1865 aa17.98■□□□□ 0.47
CCDC40-208ENST00000572270 CASP8AP2Q9UKL3 1982 aa17.97■□□□□ 0.47
CCDC40-208ENST00000572270 SRGNP10124 158 aa17.97■□□□□ 0.47
CCDC40-208ENST00000572270 FKBP4Q02790 459 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCDC40-208ENST00000572270 SLC39A6Q13433 755 aa17.97■□□□□ 0.47
CCDC40-208ENST00000572270 ZNF277Q9NRM2 450 aaPredicted RBP17.97■□□□□ 0.47
CCDC40-208ENST00000572270 VSIG10Q8N0Z9 540 aa17.96■□□□□ 0.47
CCDC40-208ENST00000572270 AOC2O75106 756 aa17.95■□□□□ 0.46
CCDC40-208ENST00000572270 STARD3NLO95772 234 aa17.95■□□□□ 0.46
CCDC40-208ENST00000572270 AKAP4Q5JQC9 854 aa17.95■□□□□ 0.46
CCDC40-208ENST00000572270 PRPF38BQ5VTL8 546 aaKnown RBP17.95■□□□□ 0.46
CCDC40-208ENST00000572270 AEBP1Q8IUX7 1158 aa17.95■□□□□ 0.46
CCDC40-208ENST00000572270 GPC2Q8N158 579 aa17.95■□□□□ 0.46
CCDC40-208ENST00000572270 MRC1P22897 1456 aa17.95■□□□□ 0.46
CCDC40-208ENST00000572270 LMOD1P29536 600 aaPredicted RBP17.94■□□□□ 0.46
CCDC40-208ENST00000572270 EIF5P55010 431 aaKnown RBP17.94■□□□□ 0.46
CCDC40-208ENST00000572270 SETDB2Q96T68 719 aa17.94■□□□□ 0.46
CCDC40-208ENST00000572270 ZNF330Q9Y3S2 320 aaPredicted RBP17.94■□□□□ 0.46
CCDC40-208ENST00000572270 TLL2Q9Y6L7 1015 aa17.94■□□□□ 0.46
CCDC40-208ENST00000572270 NPM2Q86SE8 214 aaKnown RBP17.93■□□□□ 0.46
CCDC40-208ENST00000572270 FZD9O00144 591 aa17.92■□□□□ 0.46
CCDC40-208ENST00000572270 IARSP41252 1262 aaKnown RBP17.92■□□□□ 0.46
CCDC40-208ENST00000572270 SULT6B1Q6IMI4 303 aa17.92■□□□□ 0.46
CCDC40-208ENST00000572270 RTKN2Q8IZC4 609 aa17.92■□□□□ 0.46
CCDC40-208ENST00000572270 BRPF1P55201 1214 aaPredicted RBP17.91■□□□□ 0.46
CCDC40-208ENST00000572270 FMR1Q06787 632 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC40-208ENST00000572270 C7orf43Q8WVR3 580 aa17.91■□□□□ 0.46
CCDC40-208ENST00000572270 TBC1D2BQ9UPU7 963 aa17.91■□□□□ 0.46
CCDC40-208ENST00000572270 UBR2Q8IWV8 1755 aa17.91■□□□□ 0.46
CCDC40-208ENST00000572270 NPR1P16066 1061 aa17.9■□□□□ 0.46
CCDC40-208ENST00000572270 SOX10P56693 466 aa17.9■□□□□ 0.46
CCDC40-208ENST00000572270 JDP2Q8WYK2 163 aa17.9■□□□□ 0.46
CCDC40-208ENST00000572270 LGR6Q9HBX8 967 aa17.9■□□□□ 0.46
CCDC40-208ENST00000572270 GJA3Q9Y6H8 435 aa17.9■□□□□ 0.46
CCDC40-208ENST00000572270 RNMTO43148 476 aaKnown RBP17.89■□□□□ 0.45
CCDC40-208ENST00000572270 EIF6P56537 245 aaKnown RBP17.89■□□□□ 0.45
CCDC40-208ENST00000572270 CST9Q5W186 159 aa17.89■□□□□ 0.45
CCDC40-208ENST00000572270 TTC5Q8N0Z6 440 aa17.89■□□□□ 0.45
CCDC40-208ENST00000572270 TRAF5O00463 557 aa17.88■□□□□ 0.45
CCDC40-208ENST00000572270 BCORQ6W2J9 1755 aa17.88■□□□□ 0.45
CCDC40-208ENST00000572270 USP50Q70EL3 339 aaPredicted RBP17.87■□□□□ 0.45
CCDC40-208ENST00000572270 SYNE4Q8N205 404 aa17.87■□□□□ 0.45
CCDC40-208ENST00000572270 IL6STP40189 918 aaPredicted RBP17.86■□□□□ 0.45
CCDC40-208ENST00000572270 SAPCD2Q86UD0 394 aa17.86■□□□□ 0.45
CCDC40-208ENST00000572270 NBPF5PQ86XG9 351 aaPredicted RBP17.86■□□□□ 0.45
CCDC40-208ENST00000572270 HHIPL1Q96JK4 782 aa17.86■□□□□ 0.45
CCDC40-208ENST00000572270 CELF2O95319 508 aaKnown RBP17.85■□□□□ 0.45
CCDC40-208ENST00000572270 CIAPIN1Q6FI81 312 aa17.85■□□□□ 0.45
CCDC40-208ENST00000572270 OLFM4Q6UX06 510 aa17.85■□□□□ 0.45
CCDC40-208ENST00000572270 TEX13AQ9BXU3 409 aaPredicted RBP17.85■□□□□ 0.45
CCDC40-208ENST00000572270 CAMTA2O94983 1202 aa17.84■□□□□ 0.45
CCDC40-208ENST00000572270 EPS15P42566 896 aa17.84■□□□□ 0.45
CCDC40-208ENST00000572270 SCNN1DP51172 638 aa17.84■□□□□ 0.45
CCDC40-208ENST00000572270 ALDH1B1P30837 517 aa17.82■□□□□ 0.44
CCDC40-208ENST00000572270 PSMD1Q99460 953 aa17.82■□□□□ 0.44
CCDC40-208ENST00000572270 HEG1Q9ULI3 1381 aa17.81■□□□□ 0.44
CCDC40-208ENST00000572270 NOGQ13253 232 aa17.81■□□□□ 0.44
CCDC40-208ENST00000572270 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
CCDC40-208ENST00000572270 GCC1Q96CN9 775 aa17.8■□□□□ 0.44
CCDC40-208ENST00000572270 ZNF408Q9H9D4 720 aa17.8■□□□□ 0.44
CCDC40-208ENST00000572270 ZNF652Q9Y2D9 606 aa17.8■□□□□ 0.44
CCDC40-208ENST00000572270 KLRG2A4D1S0 409 aaPredicted RBP17.79■□□□□ 0.44
CCDC40-208ENST00000572270 LARGE2Q8N3Y3 721 aa17.79■□□□□ 0.44
CCDC40-208ENST00000572270 ZNF496Q96IT1 587 aaPredicted RBP17.79■□□□□ 0.44
CCDC40-208ENST00000572270 POLR3GLQ9BT43 218 aa17.79■□□□□ 0.44
CCDC40-208ENST00000572270 ADARB2Q9NS39 739 aaKnown RBP17.79■□□□□ 0.44
CCDC40-208ENST00000572270 COL4A5P29400 1685 aa17.78■□□□□ 0.44
CCDC40-208ENST00000572270 IL13P35225 146 aa17.78■□□□□ 0.44
CCDC40-208ENST00000572270 CLEC4GQ6UXB4 293 aa17.78■□□□□ 0.44
CCDC40-208ENST00000572270 TPTE2Q6XPS3 522 aa17.78■□□□□ 0.44
CCDC40-208ENST00000572270 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
CCDC40-208ENST00000572270 A1BGP04217 495 aa17.77■□□□□ 0.44
CCDC40-208ENST00000572270 CC2D2BQ6DHV5 1058 aa17.77■□□□□ 0.44
CCDC40-208ENST00000572270 SNED1Q8TER0 1413 aa17.76■□□□□ 0.43
CCDC40-208ENST00000572270 ZNF790Q6PG37 636 aa17.76■□□□□ 0.43
CCDC40-208ENST00000572270 MORC1Q86VD1 984 aa17.76■□□□□ 0.43
CCDC40-208ENST00000572270 NIM1KQ8IY84 436 aa17.76■□□□□ 0.43
CCDC40-208ENST00000572270 GLIS2Q9BZE0 524 aaPredicted RBP17.76■□□□□ 0.43
CCDC40-208ENST00000572270 SAGE1Q9NXZ1 904 aa17.76■□□□□ 0.43
CCDC40-208ENST00000572270 TEFQ10587 303 aa17.75■□□□□ 0.43
CCDC40-208ENST00000572270 FMNL2Q96PY5 1086 aa17.75■□□□□ 0.43
CCDC40-208ENST00000572270 GPRC5DQ9NZD1 345 aa17.75■□□□□ 0.43
CCDC40-208ENST00000572270 FAM177BA6PVY3 158 aa17.74■□□□□ 0.43
CCDC40-208ENST00000572270 HMOX1P09601 288 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms