RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 NPM2Q86SE8 214 aaKnown RBP26.78■■□□□ 1.88
CCDC40-206ENST00000572083 GAS2L2Q8NHY3 880 aa26.78■■□□□ 1.88
CCDC40-206ENST00000572083 CNKSR1Q969H4 720 aa26.78■■□□□ 1.88
CCDC40-206ENST00000572083 FMNL2Q96PY5 1086 aa26.78■■□□□ 1.88
CCDC40-206ENST00000572083 PER1O15534 1290 aaPredicted RBP26.77■■□□□ 1.88
CCDC40-206ENST00000572083 CNGB1Q14028 1251 aaPredicted RBP26.77■■□□□ 1.88
CCDC40-206ENST00000572083 STYK1Q6J9G0 422 aa26.77■■□□□ 1.88
CCDC40-206ENST00000572083 SRGNP10124 158 aa26.76■■□□□ 1.87
CCDC40-206ENST00000572083 KCNQ3O43525 872 aa26.75■■□□□ 1.87
CCDC40-206ENST00000572083 PIP4K2AP48426 406 aaPredicted RBP26.75■■□□□ 1.87
CCDC40-206ENST00000572083 DZIP3Q86Y13 1208 aaKnown RBP26.75■■□□□ 1.87
CCDC40-206ENST00000572083 MASTLQ96GX5 879 aa26.75■■□□□ 1.87
CCDC40-206ENST00000572083 CEMIPQ8WUJ3 1361 aa26.73■■□□□ 1.87
CCDC40-206ENST00000572083 SOGA3Q5TF21 947 aa26.73■■□□□ 1.87
CCDC40-206ENST00000572083 BTBD11A6QL63 1104 aa26.72■■□□□ 1.87
CCDC40-206ENST00000572083 CNTNAP1P78357 1384 aa26.71■■□□□ 1.87
CCDC40-206ENST00000572083 SCN4AP35499 1836 aa26.7■■□□□ 1.87
CCDC40-206ENST00000572083 IQCA1LA6NCM1 817 aa26.7■■□□□ 1.86
CCDC40-206ENST00000572083 NBPF5PQ86XG9 351 aaPredicted RBP26.7■■□□□ 1.86
CCDC40-206ENST00000572083 PASKQ96RG2 1323 aa26.69■■□□□ 1.86
CCDC40-206ENST00000572083 PRAMEF22A3QJZ6 481 aa26.69■■□□□ 1.86
CCDC40-206ENST00000572083 FOXN1O15353 648 aa26.69■■□□□ 1.86
CCDC40-206ENST00000572083 LDHDQ86WU2 507 aa26.69■■□□□ 1.86
CCDC40-206ENST00000572083 USP16Q9Y5T5 823 aa26.69■■□□□ 1.86
CCDC40-206ENST00000572083 CCDC93Q567U6 631 aa26.68■■□□□ 1.86
CCDC40-206ENST00000572083 CCER1Q8TC90 406 aaPredicted RBP26.68■■□□□ 1.86
CCDC40-206ENST00000572083 C7orf43Q8WVR3 580 aa26.68■■□□□ 1.86
CCDC40-206ENST00000572083 L3MBTL3Q96JM7 780 aaPredicted RBP26.68■■□□□ 1.86
CCDC40-206ENST00000572083 PHACTR3Q96KR7 559 aa26.68■■□□□ 1.86
CCDC40-206ENST00000572083 TAF1DQ9H5J8 278 aaPredicted RBP26.68■■□□□ 1.86
CCDC40-206ENST00000572083 ZNF541Q9H0D2 1346 aa26.67■■□□□ 1.86
CCDC40-206ENST00000572083 PRKAR2BP31323 418 aa26.66■■□□□ 1.86
CCDC40-206ENST00000572083 EAPPQ56P03 285 aaPredicted RBP26.66■■□□□ 1.86
CCDC40-206ENST00000572083 OLFM4Q6UX06 510 aa26.66■■□□□ 1.86
CCDC40-206ENST00000572083 ZNF277Q9NRM2 450 aaPredicted RBP26.66■■□□□ 1.86
CCDC40-206ENST00000572083 NPR1P16066 1061 aa26.65■■□□□ 1.86
CCDC40-206ENST00000572083 ZNF652Q9Y2D9 606 aa26.65■■□□□ 1.86
CCDC40-206ENST00000572083 FKBP4Q02790 459 aaKnown RBP eCLIP26.64■■□□□ 1.86
CCDC40-206ENST00000572083 CLEC4GQ6UXB4 293 aa26.64■■□□□ 1.86
CCDC40-206ENST00000572083 NPC1L1Q9UHC9 1359 aa26.63■■□□□ 1.85
CCDC40-206ENST00000572083 RSPH6AQ9H0K4 717 aa26.63■■□□□ 1.85
CCDC40-206ENST00000572083 ADAMTSL1Q8N6G6 1762 aa26.62■■□□□ 1.85
CCDC40-206ENST00000572083 TMEM88BA6NKF7 163 aa26.62■■□□□ 1.85
CCDC40-206ENST00000572083 FAM177BA6PVY3 158 aa26.62■■□□□ 1.85
CCDC40-206ENST00000572083 VEGFBP49765 207 aa26.62■■□□□ 1.85
CCDC40-206ENST00000572083 NIP7Q9Y221 180 aaKnown RBP eCLIP26.62■■□□□ 1.85
CCDC40-206ENST00000572083 ITGBL1O95965 494 aaPredicted RBP26.61■■□□□ 1.85
CCDC40-206ENST00000572083 HACL1Q9UJ83 578 aa26.61■■□□□ 1.85
CCDC40-206ENST00000572083 CLEC11AQ9Y240 323 aa26.61■■□□□ 1.85
CCDC40-206ENST00000572083 KLRG2A4D1S0 409 aaPredicted RBP26.6■■□□□ 1.85
CCDC40-206ENST00000572083 SNRPA1P09661 255 aaKnown RBP26.6■■□□□ 1.85
CCDC40-206ENST00000572083 MCM10Q7L590 875 aa26.6■■□□□ 1.85
CCDC40-206ENST00000572083 AIDAQ96BJ3 306 aa26.6■■□□□ 1.85
CCDC40-206ENST00000572083 RNF123Q5XPI4 1314 aa26.6■■□□□ 1.85
CCDC40-206ENST00000572083 EPHX2P34913 555 aa26.59■■□□□ 1.85
CCDC40-206ENST00000572083 TPTE2Q6XPS3 522 aa26.59■■□□□ 1.85
CCDC40-206ENST00000572083 PRDM10Q9NQV6 1147 aa26.59■■□□□ 1.85
CCDC40-206ENST00000572083 NBPF26B4DH59 902 aa26.58■■□□□ 1.85
CCDC40-206ENST00000572083 CTCFP49711 727 aaPredicted RBP26.58■■□□□ 1.85
CCDC40-206ENST00000572083 NBPF10Q6P3W6 841 aaKnown RBP26.58■■□□□ 1.85
CCDC40-206ENST00000572083 NBPF15Q8N660 670 aa26.58■■□□□ 1.85
CCDC40-206ENST00000572083 RTKN2Q8IZC4 609 aa26.57■■□□□ 1.84
CCDC40-206ENST00000572083 RTF1Q92541 710 aaKnown RBP26.57■■□□□ 1.84
CCDC40-206ENST00000572083 IARSP41252 1262 aaKnown RBP26.56■■□□□ 1.84
CCDC40-206ENST00000572083 DCTN1Q14203 1278 aa26.55■■□□□ 1.84
CCDC40-206ENST00000572083 HLFQ16534 295 aa26.55■■□□□ 1.84
CCDC40-206ENST00000572083 MAP1SQ66K74 1059 aaPredicted RBP26.55■■□□□ 1.84
CCDC40-206ENST00000572083 CFAP53Q96M91 514 aa26.55■■□□□ 1.84
CCDC40-206ENST00000572083 FZD9O00144 591 aa26.54■■□□□ 1.84
CCDC40-206ENST00000572083 SYNE4Q8N205 404 aa26.54■■□□□ 1.84
CCDC40-206ENST00000572083 GTF2E1P29083 439 aaPredicted RBP26.53■■□□□ 1.84
CCDC40-206ENST00000572083 PNMA8AQ86V59 439 aaPredicted RBP26.53■■□□□ 1.84
CCDC40-206ENST00000572083 CNTROBQ8N137 903 aa26.53■■□□□ 1.84
CCDC40-206ENST00000572083 WBP1LQ9NX94 342 aa26.53■■□□□ 1.84
CCDC40-206ENST00000572083 LAMB4A4D0S4 1761 aa26.53■■□□□ 1.84
CCDC40-206ENST00000572083 ALDH1B1P30837 517 aa26.52■■□□□ 1.84
CCDC40-206ENST00000572083 LBX1P52954 281 aa26.52■■□□□ 1.84
CCDC40-206ENST00000572083 SNED1Q8TER0 1413 aa26.52■■□□□ 1.84
CCDC40-206ENST00000572083 ABCC12Q96J65 1359 aa26.52■■□□□ 1.84
CCDC40-206ENST00000572083 COL4A5P29400 1685 aa26.51■■□□□ 1.83
CCDC40-206ENST00000572083 RASSF10A6NK89 507 aa26.51■■□□□ 1.83
CCDC40-206ENST00000572083 RGL2O15211 777 aa26.51■■□□□ 1.83
CCDC40-206ENST00000572083 U2AF1L5P0DN76 240 aaPredicted RBP26.51■■□□□ 1.83
CCDC40-206ENST00000572083 U2AF1Q01081 240 aaKnown RBP eCLIP26.51■■□□□ 1.83
CCDC40-206ENST00000572083 GPC2Q8N158 579 aa26.51■■□□□ 1.83
CCDC40-206ENST00000572083 NUDCQ9Y266 331 aa26.5■■□□□ 1.83
CCDC40-206ENST00000572083 LTBP1Q14766 1721 aa26.49■■□□□ 1.83
CCDC40-206ENST00000572083 DEFB115Q30KQ5 88 aa26.49■■□□□ 1.83
CCDC40-206ENST00000572083 NUTM1Q86Y26 1132 aa26.49■■□□□ 1.83
CCDC40-206ENST00000572083 NGEFQ8N5V2 710 aa26.48■■□□□ 1.83
CCDC40-206ENST00000572083 JDP2Q8WYK2 163 aa26.48■■□□□ 1.83
CCDC40-206ENST00000572083 PSMD1Q99460 953 aa26.48■■□□□ 1.83
CCDC40-206ENST00000572083 ABT1Q9ULW3 272 aaKnown RBP26.48■■□□□ 1.83
CCDC40-206ENST00000572083 GJA3Q9Y6H8 435 aa26.48■■□□□ 1.83
CCDC40-206ENST00000572083 CRY2Q49AN0 593 aa26.47■■□□□ 1.83
CCDC40-206ENST00000572083 MIS18AQ9NYP9 233 aa26.47■■□□□ 1.83
CCDC40-206ENST00000572083 WDR33Q9C0J8 1336 aaKnown RBP26.46■■□□□ 1.83
CCDC40-206ENST00000572083 HSPA8P11142 646 aaKnown RBP26.46■■□□□ 1.83
CCDC40-206ENST00000572083 SLC51AQ86UW1 340 aa26.46■■□□□ 1.83
CCDC40-206ENST00000572083 NYXQ9GZU5 481 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms