RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 MCM10Q7L590 875 aa20.68■□□□□ 0.9
TSR1-202ENST00000571806 KLRG1Q96E93 195 aa20.68■□□□□ 0.9
TSR1-202ENST00000571806 MASTLQ96GX5 879 aa20.68■□□□□ 0.9
TSR1-202ENST00000571806 LTBP3Q9NS15 1303 aa20.68■□□□□ 0.9
TSR1-202ENST00000571806 CCDC88AQ3V6T2 1871 aa20.68■□□□□ 0.9
TSR1-202ENST00000571806 TIAM2Q8IVF5 1701 aa20.67■□□□□ 0.9
TSR1-202ENST00000571806 SRGNP10124 158 aa20.67■□□□□ 0.9
TSR1-202ENST00000571806 TAF7Q15545 349 aaPredicted RBP20.67■□□□□ 0.9
TSR1-202ENST00000571806 ERFEQ4G0M1 354 aa20.66■□□□□ 0.9
TSR1-202ENST00000571806 NBPF5PQ86XG9 351 aaPredicted RBP20.66■□□□□ 0.9
TSR1-202ENST00000571806 FER1L6Q2WGJ9 1857 aa20.66■□□□□ 0.9
TSR1-202ENST00000571806 TPTE2Q6XPS3 522 aa20.65■□□□□ 0.9
TSR1-202ENST00000571806 JMYQ8N9B5 988 aa20.65■□□□□ 0.9
TSR1-202ENST00000571806 PNISRQ8TF01 805 aaKnown RBP20.65■□□□□ 0.9
TSR1-202ENST00000571806 TAOK3Q9H2K8 898 aa20.65■□□□□ 0.9
TSR1-202ENST00000571806 COL11A2P13942 1736 aaPredicted RBP20.64■□□□□ 0.9
TSR1-202ENST00000571806 CCDC24Q8N4L8 307 aa20.64■□□□□ 0.89
TSR1-202ENST00000571806 DICER1Q9UPY3 1922 aaKnown RBP20.64■□□□□ 0.89
TSR1-202ENST00000571806 PRPF40BQ6NWY9 871 aaKnown RBP20.63■□□□□ 0.89
TSR1-202ENST00000571806 PNNQ9H307 717 aaKnown RBP20.63■□□□□ 0.89
TSR1-202ENST00000571806 ARFGEF2Q9Y6D5 1785 aa20.62■□□□□ 0.89
TSR1-202ENST00000571806 PRAMEF22A3QJZ6 481 aa20.62■□□□□ 0.89
TSR1-202ENST00000571806 NPR1P16066 1061 aa20.62■□□□□ 0.89
TSR1-202ENST00000571806 ZNF219Q9P2Y4 722 aaPredicted RBP20.62■□□□□ 0.89
TSR1-202ENST00000571806 KLRG2A4D1S0 409 aaPredicted RBP20.61■□□□□ 0.89
TSR1-202ENST00000571806 PIP4K2AP48426 406 aaPredicted RBP20.61■□□□□ 0.89
TSR1-202ENST00000571806 DCTN1Q14203 1278 aa20.61■□□□□ 0.89
TSR1-202ENST00000571806 NIP7Q9Y221 180 aaKnown RBP eCLIP20.61■□□□□ 0.89
TSR1-202ENST00000571806 POTECB2RU33 542 aa20.59■□□□□ 0.89
TSR1-202ENST00000571806 NBPF26B4DH59 902 aa20.59■□□□□ 0.89
TSR1-202ENST00000571806 HTRA3P83110 453 aa20.59■□□□□ 0.89
TSR1-202ENST00000571806 NBPF10Q6P3W6 841 aaKnown RBP20.59■□□□□ 0.89
TSR1-202ENST00000571806 NBPF15Q8N660 670 aa20.59■□□□□ 0.89
TSR1-202ENST00000571806 SLX4Q8IY92 1834 aa20.59■□□□□ 0.89
TSR1-202ENST00000571806 ALDH1B1P30837 517 aa20.58■□□□□ 0.89
TSR1-202ENST00000571806 CCDC93Q567U6 631 aa20.58■□□□□ 0.89
TSR1-202ENST00000571806 ERVV-1B6SEH8 477 aa20.57■□□□□ 0.88
TSR1-202ENST00000571806 GTF2E1P29083 439 aaPredicted RBP20.57■□□□□ 0.88
TSR1-202ENST00000571806 C7orf43Q8WVR3 580 aa20.57■□□□□ 0.88
TSR1-202ENST00000571806 NYXQ9GZU5 481 aa20.57■□□□□ 0.88
TSR1-202ENST00000571806 LAMB4A4D0S4 1761 aa20.57■□□□□ 0.88
TSR1-202ENST00000571806 CACNA1SQ13698 1873 aa20.56■□□□□ 0.88
TSR1-202ENST00000571806 IQCA1LA6NCM1 817 aa20.56■□□□□ 0.88
TSR1-202ENST00000571806 RTKN2Q8IZC4 609 aa20.56■□□□□ 0.88
TSR1-202ENST00000571806 PLEKHF1Q96S99 279 aa20.55■□□□□ 0.88
TSR1-202ENST00000571806 MIS18AQ9NYP9 233 aa20.55■□□□□ 0.88
TSR1-202ENST00000571806 FKBP4Q02790 459 aaKnown RBP eCLIP20.54■□□□□ 0.88
TSR1-202ENST00000571806 NFE2L2Q16236 605 aa20.54■□□□□ 0.88
TSR1-202ENST00000571806 MAPK8IP3Q9UPT6 1336 aa20.53■□□□□ 0.88
TSR1-202ENST00000571806 DLG5Q8TDM6 1919 aa20.53■□□□□ 0.88
TSR1-202ENST00000571806 DDNO94850 711 aaPredicted RBP20.53■□□□□ 0.88
TSR1-202ENST00000571806 EIF4A1P60842 406 aaKnown RBP20.53■□□□□ 0.88
TSR1-202ENST00000571806 HLFQ16534 295 aa20.53■□□□□ 0.88
TSR1-202ENST00000571806 CHADLQ6NUI6 762 aa20.53■□□□□ 0.88
TSR1-202ENST00000571806 KIF6Q6ZMV9 814 aa20.53■□□□□ 0.88
TSR1-202ENST00000571806 KDM3BQ7LBC6 1761 aa20.53■□□□□ 0.88
TSR1-202ENST00000571806 L3MBTL3Q96JM7 780 aaPredicted RBP20.52■□□□□ 0.88
TSR1-202ENST00000571806 MAP3K15Q6ZN16 1313 aa20.52■□□□□ 0.87
TSR1-202ENST00000571806 GRIPAP1Q4V328 841 aa20.51■□□□□ 0.87
TSR1-202ENST00000571806 ERBB4Q15303 1308 aa20.51■□□□□ 0.87
TSR1-202ENST00000571806 SCN4AP35499 1836 aa20.5■□□□□ 0.87
TSR1-202ENST00000571806 FAM177BA6PVY3 158 aa20.5■□□□□ 0.87
TSR1-202ENST00000571806 CRY2Q49AN0 593 aa20.5■□□□□ 0.87
TSR1-202ENST00000571806 CC2D2BQ6DHV5 1058 aa20.5■□□□□ 0.87
TSR1-202ENST00000571806 IBTKQ9P2D0 1353 aaPredicted RBP20.49■□□□□ 0.87
TSR1-202ENST00000571806 CREBZFQ9NS37 354 aa20.49■□□□□ 0.87
TSR1-202ENST00000571806 RRP7AQ9Y3A4 280 aaKnown RBP20.49■□□□□ 0.87
TSR1-202ENST00000571806 LDHDQ86WU2 507 aa20.48■□□□□ 0.87
TSR1-202ENST00000571806 NGEFQ8N5V2 710 aa20.48■□□□□ 0.87
TSR1-202ENST00000571806 BABAM1Q9NWV8 329 aa20.48■□□□□ 0.87
TSR1-202ENST00000571806 NUP98P52948 1817 aa20.48■□□□□ 0.87
TSR1-202ENST00000571806 RIC1Q4ADV7 1423 aa20.47■□□□□ 0.87
TSR1-202ENST00000571806 PSMD1Q99460 953 aa20.47■□□□□ 0.87
TSR1-202ENST00000571806 ZNF277Q9NRM2 450 aaPredicted RBP20.47■□□□□ 0.87
TSR1-202ENST00000571806 MYL6BP14649 208 aa20.46■□□□□ 0.87
TSR1-202ENST00000571806 IARSP41252 1262 aaKnown RBP20.46■□□□□ 0.87
TSR1-202ENST00000571806 RALBP1Q15311 655 aa20.46■□□□□ 0.87
TSR1-202ENST00000571806 RPGRQ92834 1020 aaKnown RBP20.46■□□□□ 0.87
TSR1-202ENST00000571806 TAF1DQ9H5J8 278 aaPredicted RBP20.46■□□□□ 0.87
TSR1-202ENST00000571806 FZD9O00144 591 aa20.45■□□□□ 0.86
TSR1-202ENST00000571806 HOXA10P31260 410 aaPredicted RBP20.45■□□□□ 0.86
TSR1-202ENST00000571806 LMOD3Q0VAK6 560 aa20.45■□□□□ 0.86
TSR1-202ENST00000571806 GIGYF2Q6Y7W6 1299 aaKnown RBP20.45■□□□□ 0.86
TSR1-202ENST00000571806 TTLL7Q6ZT98 887 aa20.45■□□□□ 0.86
TSR1-202ENST00000571806 PPP1R42Q7Z4L9 355 aa20.45■□□□□ 0.86
TSR1-202ENST00000571806 PNMA8AQ86V59 439 aaPredicted RBP20.45■□□□□ 0.86
TSR1-202ENST00000571806 SYNE4Q8N205 404 aa20.45■□□□□ 0.86
TSR1-202ENST00000571806 JDP2Q8WYK2 163 aa20.45■□□□□ 0.86
TSR1-202ENST00000571806 TSPYL4Q9UJ04 414 aa20.45■□□□□ 0.86
TSR1-202ENST00000571806 HACL1Q9UJ83 578 aa20.45■□□□□ 0.86
TSR1-202ENST00000571806 PCNTO95613 3336 aa20.44■□□□□ 0.86
TSR1-202ENST00000571806 PARP10Q53GL7 1025 aa20.44■□□□□ 0.86
TSR1-202ENST00000571806 COL13A1Q5TAT6 717 aaPredicted RBP20.44■□□□□ 0.86
TSR1-202ENST00000571806 NUTM1Q86Y26 1132 aa20.44■□□□□ 0.86
TSR1-202ENST00000571806 ZNF34Q8IZ26 560 aa20.44■□□□□ 0.86
TSR1-202ENST00000571806 RBM17Q96I25 401 aaKnown RBP20.44■□□□□ 0.86
TSR1-202ENST00000571806 THUMPD2Q9BTF0 503 aaKnown RBP20.44■□□□□ 0.86
TSR1-202ENST00000571806 GPC2Q8N158 579 aa20.43■□□□□ 0.86
TSR1-202ENST00000571806 CRAMP1Q96RY5 1269 aa20.43■□□□□ 0.86
TSR1-202ENST00000571806 ZBTB3Q9H5J0 574 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms