RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 ZMYM3Q14202 1370 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 CAMSAP1Q5T5Y3 1602 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 NEXMIFQ5QGS0 1516 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 ZNF165P49910 485 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 FAM177A1Q8N128 213 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA4-201ENST00000571252 PCMTD1Q96MG8 357 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA4-201ENST00000571252 METP08581 1390 aa13.08□□□□□ -0.32
PCDHGA4-201ENST00000571252 ATP8B2P98198 1209 aa13.08□□□□□ -0.32
PCDHGA4-201ENST00000571252 PI4KAP2A4QPH2 592 aa13.08□□□□□ -0.32
PCDHGA4-201ENST00000571252 PI4KAP1Q8N8J0 262 aa13.08□□□□□ -0.32
PCDHGA4-201ENST00000571252 ZNF445P59923 1031 aa13.08□□□□□ -0.32
PCDHGA4-201ENST00000571252 INTS4Q96HW7 963 aaKnown RBP13.08□□□□□ -0.32
PCDHGA4-201ENST00000571252 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 VPS53Q5VIR6 699 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 NOL7Q9UMY1 257 aaKnown RBP13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 NECAB1Q8N987 351 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 ANO10Q9NW15 660 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 NEURL4Q96JN8 1562 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 CCDC158Q5M9N0 1113 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 TTLL5Q6EMB2 1281 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 KIF18AQ8NI77 898 aa13.07□□□□□ -0.32
PCDHGA4-201ENST00000571252 PPLO60437 1756 aa13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 TNRQ92752 1358 aa13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 FSD2A1L4K1 749 aa13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 FOXO3O43524 673 aa13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 SFPQP23246 707 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 GAS2L3Q86XJ1 694 aa13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 ACBD3Q9H3P7 528 aa13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 EDC4Q6P2E9 1401 aaKnown RBP13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 PIK3R4Q99570 1358 aa13.06□□□□□ -0.32
PCDHGA4-201ENST00000571252 ANXA1P04083 346 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 CHMLP26374 656 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 TRIM34Q9BYJ4 488 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 TBC1D2BQ9UPU7 963 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 KIF2AO00139 706 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 F13A1P00488 732 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 DNM1Q05193 864 aaKnown RBP13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 ANKLE2Q86XL3 938 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 UBXN4Q92575 508 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 LMBRD1Q9NUN5 540 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 TRMT1Q9NXH9 659 aaKnown RBP13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 TSPOAP1O95153 1857 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 GUCY1B3Q02153 619 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 SART3Q15020 963 aaKnown RBP13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 TTC39AQ5SRH9 613 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 TCEANC2Q96MN5 208 aa13.05□□□□□ -0.32
PCDHGA4-201ENST00000571252 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 LARP1Q6PKG0 1096 aaKnown RBP13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 CCDC47Q96A33 483 aaKnown RBP13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 PTPRMP28827 1452 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 XBP1P17861 261 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 FAM200AQ8TCP9 573 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 CTAGE5O15320 804 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 FILIP1LQ4L180 1135 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 SMTNL1A8MU46 457 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 CBFA2T2O43439 604 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 CFAP100Q494V2 611 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 RRP12Q5JTH9 1297 aaKnown RBP13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 CCDC186Q7Z3E2 898 aa13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA4-201ENST00000571252 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
PCDHGA4-201ENST00000571252 PIK3C2BO00750 1634 aa13.03□□□□□ -0.32
PCDHGA4-201ENST00000571252 STK11IPQ8N1F8 1099 aa13.03□□□□□ -0.32
PCDHGA4-201ENST00000571252 AK2P54819 239 aa13.03□□□□□ -0.32
PCDHGA4-201ENST00000571252 ALKQ9UM73 1620 aa13.03□□□□□ -0.32
PCDHGA4-201ENST00000571252 DACT1Q9NYF0 836 aa13.03□□□□□ -0.32
PCDHGA4-201ENST00000571252 NEMFO60524 1076 aa13.02□□□□□ -0.32
PCDHGA4-201ENST00000571252 MSH6P52701 1360 aa13.02□□□□□ -0.32
PCDHGA4-201ENST00000571252 FSIP1Q8NA03 581 aa13.02□□□□□ -0.33
PCDHGA4-201ENST00000571252 CWC15Q9P013 229 aaKnown RBP13.02□□□□□ -0.33
PCDHGA4-201ENST00000571252 CGNQ9P2M7 1197 aaKnown RBP13.02□□□□□ -0.33
PCDHGA4-201ENST00000571252 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCDHGA4-201ENST00000571252 MAP3K2Q9Y2U5 619 aa13.02□□□□□ -0.33
PCDHGA4-201ENST00000571252 RBM8AQ9Y5S9 174 aaKnown RBP13.02□□□□□ -0.33
PCDHGA4-201ENST00000571252 MYO3AQ8NEV4 1616 aa13.02□□□□□ -0.33
PCDHGA4-201ENST00000571252 ERICH4A6NGS2 130 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 CAVIN2O95810 425 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 SYT1P21579 422 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 G2E3Q7L622 706 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 BRMS1Q9HCU9 246 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 ZC3H13Q5T200 1668 aaKnown RBP13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 RAD21O60216 631 aa13.01□□□□□ -0.33
PCDHGA4-201ENST00000571252 GSPT1P15170 499 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 285.5 ms