RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 FUCA2Q9BTY2 467 aa17.45■□□□□ 0.38
ITGA3-216ENST00000570989 MST1RQ04912 1400 aa17.45■□□□□ 0.38
ITGA3-216ENST00000570989 PNMA6EA0A0J9YXQ4 647 aa17.44■□□□□ 0.38
ITGA3-216ENST00000570989 AP5Z1O43299 807 aa17.44■□□□□ 0.38
ITGA3-216ENST00000570989 TOM1O60784 492 aa17.44■□□□□ 0.38
ITGA3-216ENST00000570989 GNAI2P04899 355 aa17.44■□□□□ 0.38
ITGA3-216ENST00000570989 RTF1Q92541 710 aaKnown RBP17.44■□□□□ 0.38
ITGA3-216ENST00000570989 ATP2B3Q16720 1220 aa17.44■□□□□ 0.38
ITGA3-216ENST00000570989 KLHL34Q8N239 644 aa17.44■□□□□ 0.38
ITGA3-216ENST00000570989 TRIM6-TRIM34B2RNG4 842 aa17.43■□□□□ 0.38
ITGA3-216ENST00000570989 KDM4AO75164 1064 aa17.43■□□□□ 0.38
ITGA3-216ENST00000570989 HSPA4P34932 840 aa17.43■□□□□ 0.38
ITGA3-216ENST00000570989 BCL2L12Q9HB09 334 aa17.43■□□□□ 0.38
ITGA3-216ENST00000570989 MIS18AQ9NYP9 233 aa17.43■□□□□ 0.38
ITGA3-216ENST00000570989 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
ITGA3-216ENST00000570989 KCNF1Q9H3M0 494 aa17.43■□□□□ 0.38
ITGA3-216ENST00000570989 GCP02774 474 aa17.42■□□□□ 0.38
ITGA3-216ENST00000570989 ZSCAN22P10073 491 aaPredicted RBP17.42■□□□□ 0.38
ITGA3-216ENST00000570989 KRT28Q7Z3Y7 464 aa17.42■□□□□ 0.38
ITGA3-216ENST00000570989 ALS2Q96Q42 1657 aa17.42■□□□□ 0.38
ITGA3-216ENST00000570989 RGPD2P0DJD1 1756 aa17.42■□□□□ 0.38
ITGA3-216ENST00000570989 ATF3P18847 181 aa17.42■□□□□ 0.38
ITGA3-216ENST00000570989 UBE2HP62256 183 aa17.42■□□□□ 0.38
ITGA3-216ENST00000570989 USHBP1Q8N6Y0 703 aa17.42■□□□□ 0.38
ITGA3-216ENST00000570989 LETM1O95202 739 aaPredicted RBP17.41■□□□□ 0.38
ITGA3-216ENST00000570989 LMOD2Q6P5Q4 547 aa17.41■□□□□ 0.38
ITGA3-216ENST00000570989 KIAA1524Q8TCG1 905 aa17.41■□□□□ 0.38
ITGA3-216ENST00000570989 TTC14Q96N46 770 aa17.41■□□□□ 0.38
ITGA3-216ENST00000570989 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
ITGA3-216ENST00000570989 PYCARDQ9ULZ3 195 aa17.41■□□□□ 0.38
ITGA3-216ENST00000570989 CBX1P83916 185 aa17.41■□□□□ 0.38
ITGA3-216ENST00000570989 PPP4R3BQ5MIZ7 849 aa17.41■□□□□ 0.38
ITGA3-216ENST00000570989 ARHGEF25Q86VW2 580 aa17.4■□□□□ 0.38
ITGA3-216ENST00000570989 MAP3K5Q99683 1374 aa17.4■□□□□ 0.38
ITGA3-216ENST00000570989 EPB41L2O43491 1005 aaKnown RBP17.4■□□□□ 0.38
ITGA3-216ENST00000570989 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
ITGA3-216ENST00000570989 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
ITGA3-216ENST00000570989 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
ITGA3-216ENST00000570989 SYT1P21579 422 aa17.39■□□□□ 0.37
ITGA3-216ENST00000570989 TPRNQ4KMQ1 711 aa17.39■□□□□ 0.37
ITGA3-216ENST00000570989 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
ITGA3-216ENST00000570989 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
ITGA3-216ENST00000570989 FAM208AQ9UK61 1670 aaKnown RBP17.39■□□□□ 0.37
ITGA3-216ENST00000570989 GIMAP6Q6P9H5 292 aa17.39■□□□□ 0.37
ITGA3-216ENST00000570989 CADPS2Q86UW7 1296 aa17.39■□□□□ 0.37
ITGA3-216ENST00000570989 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
ITGA3-216ENST00000570989 AOX1Q06278 1338 aa17.38■□□□□ 0.37
ITGA3-216ENST00000570989 STX6O43752 255 aa17.38■□□□□ 0.37
ITGA3-216ENST00000570989 RUFY3Q7L099 469 aa17.38■□□□□ 0.37
ITGA3-216ENST00000570989 SNX14Q9Y5W7 946 aa17.38■□□□□ 0.37
ITGA3-216ENST00000570989 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
ITGA3-216ENST00000570989 RAD50Q92878 1312 aa17.38■□□□□ 0.37
ITGA3-216ENST00000570989 F13A1P00488 732 aa17.38■□□□□ 0.37
ITGA3-216ENST00000570989 RIOK3O14730 519 aaKnown RBP17.37■□□□□ 0.37
ITGA3-216ENST00000570989 FIBPO43427 364 aa17.37■□□□□ 0.37
ITGA3-216ENST00000570989 AK2P54819 239 aa17.37■□□□□ 0.37
ITGA3-216ENST00000570989 ANKRD7Q92527 254 aa17.37■□□□□ 0.37
ITGA3-216ENST00000570989 RASEFQ8IZ41 740 aa17.37■□□□□ 0.37
ITGA3-216ENST00000570989 LARP6Q9BRS8 491 aaKnown RBP17.37■□□□□ 0.37
ITGA3-216ENST00000570989 MED1Q15648 1581 aaPredicted RBP17.37■□□□□ 0.37
ITGA3-216ENST00000570989 GNAI3P08754 354 aa17.36■□□□□ 0.37
ITGA3-216ENST00000570989 HSPA1LP34931 641 aa17.36■□□□□ 0.37
ITGA3-216ENST00000570989 DDX17Q92841 729 aaKnown RBP17.36■□□□□ 0.37
ITGA3-216ENST00000570989 LRRC59Q96AG4 307 aaKnown RBP17.36■□□□□ 0.37
ITGA3-216ENST00000570989 GTPBP4Q9BZE4 634 aaKnown RBP17.36■□□□□ 0.37
ITGA3-216ENST00000570989 SGSM2O43147 1006 aa17.35■□□□□ 0.37
ITGA3-216ENST00000570989 LARGE1O95461 756 aa17.35■□□□□ 0.37
ITGA3-216ENST00000570989 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
ITGA3-216ENST00000570989 LSG1Q9H089 658 aaKnown RBP17.35■□□□□ 0.37
ITGA3-216ENST00000570989 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
ITGA3-216ENST00000570989 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
ITGA3-216ENST00000570989 CTIFO43310 598 aaKnown RBP17.35■□□□□ 0.37
ITGA3-216ENST00000570989 BRINP3Q76B58 766 aa17.35■□□□□ 0.37
ITGA3-216ENST00000570989 PDCL2Q8N4E4 241 aa17.35■□□□□ 0.37
ITGA3-216ENST00000570989 IL1RAPL2Q9NP60 686 aa17.35■□□□□ 0.37
ITGA3-216ENST00000570989 CAMTA1Q9Y6Y1 1673 aa17.34■□□□□ 0.37
ITGA3-216ENST00000570989 FLIIQ13045 1269 aa17.34■□□□□ 0.37
ITGA3-216ENST00000570989 PI4K2BQ8TCG2 481 aa17.34■□□□□ 0.37
ITGA3-216ENST00000570989 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
ITGA3-216ENST00000570989 RGPD5Q99666 1765 aa17.34■□□□□ 0.37
ITGA3-216ENST00000570989 PHLPP1O60346 1717 aa17.34■□□□□ 0.37
ITGA3-216ENST00000570989 CRYBG1Q9Y4K1 1723 aa17.34■□□□□ 0.37
ITGA3-216ENST00000570989 MAP4K4O95819 1239 aaPredicted RBP17.33■□□□□ 0.37
ITGA3-216ENST00000570989 PLCB2Q00722 1185 aa17.33■□□□□ 0.37
ITGA3-216ENST00000570989 NUTM1Q86Y26 1132 aa17.33■□□□□ 0.37
ITGA3-216ENST00000570989 SOS1Q07889 1333 aaPredicted RBP17.33■□□□□ 0.36
ITGA3-216ENST00000570989 DNM1Q05193 864 aaKnown RBP17.33■□□□□ 0.36
ITGA3-216ENST00000570989 MTMR6Q9Y217 621 aa17.33■□□□□ 0.36
ITGA3-216ENST00000570989 NPHP3Q7Z494 1330 aa17.33■□□□□ 0.36
ITGA3-216ENST00000570989 SPDYE4A6NLX3 237 aa17.32■□□□□ 0.36
ITGA3-216ENST00000570989 DTNBO60941 627 aa17.32■□□□□ 0.36
ITGA3-216ENST00000570989 SPC24Q8NBT2 197 aa17.32■□□□□ 0.36
ITGA3-216ENST00000570989 DIAPH3Q9NSV4 1193 aa17.32■□□□□ 0.36
ITGA3-216ENST00000570989 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
ITGA3-216ENST00000570989 NHSL1Q5SYE7 1610 aa17.32■□□□□ 0.36
ITGA3-216ENST00000570989 CPA1P15085 419 aa17.32■□□□□ 0.36
ITGA3-216ENST00000570989 ANKRD24Q8TF21 1146 aa17.32■□□□□ 0.36
ITGA3-216ENST00000570989 SMC3Q9UQE7 1217 aa17.32■□□□□ 0.36
ITGA3-216ENST00000570989 LMO7Q8WWI1 1683 aa17.32■□□□□ 0.36
ITGA3-216ENST00000570989 CEMIPQ8WUJ3 1361 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms