RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 HSPA1BP0DMV9 641 aaKnown RBP25.46■■□□□ 1.67
SCARF1-204ENST00000570902 SRGNP10124 158 aa25.46■■□□□ 1.67
SCARF1-204ENST00000570902 CNGB1Q14028 1251 aaPredicted RBP25.46■■□□□ 1.67
SCARF1-204ENST00000570902 PRPF40BQ6NWY9 871 aaKnown RBP25.46■■□□□ 1.67
SCARF1-204ENST00000570902 CFAP53Q96M91 514 aa25.45■■□□□ 1.66
SCARF1-204ENST00000570902 BCORQ6W2J9 1755 aa25.45■■□□□ 1.66
SCARF1-204ENST00000570902 CHADLQ6NUI6 762 aa25.44■■□□□ 1.66
SCARF1-204ENST00000570902 CLEC4GQ6UXB4 293 aa25.44■■□□□ 1.66
SCARF1-204ENST00000570902 ZNF652Q9Y2D9 606 aa25.44■■□□□ 1.66
SCARF1-204ENST00000570902 KCNQ3O43525 872 aa25.43■■□□□ 1.66
SCARF1-204ENST00000570902 PRKAR2BP31323 418 aa25.43■■□□□ 1.66
SCARF1-204ENST00000570902 PHACTR3Q96KR7 559 aa25.43■■□□□ 1.66
SCARF1-204ENST00000570902 ARFGEF2Q9Y6D5 1785 aa25.43■■□□□ 1.66
SCARF1-204ENST00000570902 SLX4Q8IY92 1834 aa25.42■■□□□ 1.66
SCARF1-204ENST00000570902 NBPF5PQ86XG9 351 aaPredicted RBP25.42■■□□□ 1.66
SCARF1-204ENST00000570902 RSPH6AQ9H0K4 717 aa25.42■■□□□ 1.66
SCARF1-204ENST00000570902 CREBZFQ9NS37 354 aa25.42■■□□□ 1.66
SCARF1-204ENST00000570902 USP16Q9Y5T5 823 aa25.42■■□□□ 1.66
SCARF1-204ENST00000570902 IQCA1LA6NCM1 817 aa25.41■■□□□ 1.66
SCARF1-204ENST00000570902 CAPN15O75808 1086 aa25.41■■□□□ 1.66
SCARF1-204ENST00000570902 DDNO94850 711 aaPredicted RBP25.41■■□□□ 1.66
SCARF1-204ENST00000570902 NUDCQ9Y266 331 aa25.41■■□□□ 1.66
SCARF1-204ENST00000570902 SNRPA1P09661 255 aaKnown RBP25.4■■□□□ 1.66
SCARF1-204ENST00000570902 RTF1Q92541 710 aaKnown RBP25.4■■□□□ 1.66
SCARF1-204ENST00000570902 CACNA1SQ13698 1873 aa25.39■■□□□ 1.66
SCARF1-204ENST00000570902 CCDC93Q567U6 631 aa25.39■■□□□ 1.66
SCARF1-204ENST00000570902 RGL2O15211 777 aa25.38■■□□□ 1.65
SCARF1-204ENST00000570902 NPR1P16066 1061 aa25.38■■□□□ 1.65
SCARF1-204ENST00000570902 PIP4K2AP48426 406 aaPredicted RBP25.37■■□□□ 1.65
SCARF1-204ENST00000570902 TPTE2Q6XPS3 522 aa25.37■■□□□ 1.65
SCARF1-204ENST00000570902 C7orf43Q8WVR3 580 aa25.36■■□□□ 1.65
SCARF1-204ENST00000570902 L3MBTL3Q96JM7 780 aaPredicted RBP25.36■■□□□ 1.65
SCARF1-204ENST00000570902 PRAMEF22A3QJZ6 481 aa25.35■■□□□ 1.65
SCARF1-204ENST00000570902 POTEIP0CG38 1075 aa25.35■■□□□ 1.65
SCARF1-204ENST00000570902 POTEJP0CG39 1038 aa25.35■■□□□ 1.65
SCARF1-204ENST00000570902 LDHDQ86WU2 507 aa25.35■■□□□ 1.65
SCARF1-204ENST00000570902 KLRG2A4D1S0 409 aaPredicted RBP25.34■■□□□ 1.65
SCARF1-204ENST00000570902 U2AF1L5P0DN76 240 aaPredicted RBP25.34■■□□□ 1.65
SCARF1-204ENST00000570902 U2AF1Q01081 240 aaKnown RBP eCLIP25.34■■□□□ 1.65
SCARF1-204ENST00000570902 FKBP4Q02790 459 aaKnown RBP eCLIP25.34■■□□□ 1.65
SCARF1-204ENST00000570902 MCM10Q7L590 875 aa25.34■■□□□ 1.65
SCARF1-204ENST00000570902 MKRN1Q9UHC7 482 aaKnown RBP25.34■■□□□ 1.65
SCARF1-204ENST00000570902 NIP7Q9Y221 180 aaKnown RBP eCLIP25.34■■□□□ 1.65
SCARF1-204ENST00000570902 SCN4AP35499 1836 aa25.33■■□□□ 1.65
SCARF1-204ENST00000570902 RTKN2Q8IZC4 609 aa25.33■■□□□ 1.65
SCARF1-204ENST00000570902 TAF1DQ9H5J8 278 aaPredicted RBP25.33■■□□□ 1.65
SCARF1-204ENST00000570902 HTATSF1O43719 755 aaKnown RBP25.32■■□□□ 1.64
SCARF1-204ENST00000570902 PASKQ96RG2 1323 aa25.31■■□□□ 1.64
SCARF1-204ENST00000570902 NBPF26B4DH59 902 aa25.3■■□□□ 1.64
SCARF1-204ENST00000570902 ALDH1B1P30837 517 aa25.3■■□□□ 1.64
SCARF1-204ENST00000570902 NBPF10Q6P3W6 841 aaKnown RBP25.3■■□□□ 1.64
SCARF1-204ENST00000570902 NBPF15Q8N660 670 aa25.3■■□□□ 1.64
SCARF1-204ENST00000570902 CNTNAP1P78357 1384 aa25.3■■□□□ 1.64
SCARF1-204ENST00000570902 ZNF277Q9NRM2 450 aaPredicted RBP25.29■■□□□ 1.64
SCARF1-204ENST00000570902 GTF2E1P29083 439 aaPredicted RBP25.28■■□□□ 1.64
SCARF1-204ENST00000570902 HACL1Q9UJ83 578 aa25.28■■□□□ 1.64
SCARF1-204ENST00000570902 TAF7Q15545 349 aaPredicted RBP25.27■■□□□ 1.64
SCARF1-204ENST00000570902 ZNF541Q9H0D2 1346 aa25.27■■□□□ 1.64
SCARF1-204ENST00000570902 TMEM88BA6NKF7 163 aa25.26■■□□□ 1.63
SCARF1-204ENST00000570902 FAM177BA6PVY3 158 aa25.26■■□□□ 1.63
SCARF1-204ENST00000570902 PPP2R1AP30153 589 aa25.26■■□□□ 1.63
SCARF1-204ENST00000570902 DCTN1Q14203 1278 aa25.26■■□□□ 1.63
SCARF1-204ENST00000570902 EAPPQ56P03 285 aaPredicted RBP25.26■■□□□ 1.63
SCARF1-204ENST00000570902 IARSP41252 1262 aaKnown RBP25.25■■□□□ 1.63
SCARF1-204ENST00000570902 PNMA8AQ86V59 439 aaPredicted RBP25.25■■□□□ 1.63
SCARF1-204ENST00000570902 NYXQ9GZU5 481 aa25.25■■□□□ 1.63
SCARF1-204ENST00000570902 ITGBL1O95965 494 aaPredicted RBP25.24■■□□□ 1.63
SCARF1-204ENST00000570902 EPHX2P34913 555 aa25.24■■□□□ 1.63
SCARF1-204ENST00000570902 HLFQ16534 295 aa25.24■■□□□ 1.63
SCARF1-204ENST00000570902 OLFM4Q6UX06 510 aa25.24■■□□□ 1.63
SCARF1-204ENST00000570902 CLEC11AQ9Y240 323 aa25.24■■□□□ 1.63
SCARF1-204ENST00000570902 FZD9O00144 591 aa25.23■■□□□ 1.63
SCARF1-204ENST00000570902 SYNE4Q8N205 404 aa25.23■■□□□ 1.63
SCARF1-204ENST00000570902 LAMB4A4D0S4 1761 aa25.23■■□□□ 1.63
SCARF1-204ENST00000570902 PNISRQ8TF01 805 aaKnown RBP25.22■■□□□ 1.63
SCARF1-204ENST00000570902 AIDAQ96BJ3 306 aa25.22■■□□□ 1.63
SCARF1-204ENST00000570902 PSMD1Q99460 953 aa25.22■■□□□ 1.63
SCARF1-204ENST00000570902 ERVV-1B6SEH8 477 aa25.21■■□□□ 1.63
SCARF1-204ENST00000570902 NEFMP07197 916 aa25.21■■□□□ 1.63
SCARF1-204ENST00000570902 CRY2Q49AN0 593 aa25.21■■□□□ 1.63
SCARF1-204ENST00000570902 CC2D2BQ6DHV5 1058 aa25.21■■□□□ 1.63
SCARF1-204ENST00000570902 GPC2Q8N158 579 aa25.21■■□□□ 1.63
SCARF1-204ENST00000570902 JDP2Q8WYK2 163 aa25.21■■□□□ 1.63
SCARF1-204ENST00000570902 PRDM10Q9NQV6 1147 aa25.21■■□□□ 1.63
SCARF1-204ENST00000570902 RNF123Q5XPI4 1314 aa25.2■■□□□ 1.62
SCARF1-204ENST00000570902 FOXN1O15353 648 aa25.2■■□□□ 1.62
SCARF1-204ENST00000570902 VEGFBP49765 207 aa25.2■■□□□ 1.62
SCARF1-204ENST00000570902 ADAMTSL1Q8N6G6 1762 aa25.2■■□□□ 1.62
SCARF1-204ENST00000570902 MIS18AQ9NYP9 233 aa25.19■■□□□ 1.62
SCARF1-204ENST00000570902 CTCFP49711 727 aaPredicted RBP25.18■■□□□ 1.62
SCARF1-204ENST00000570902 GRIPAP1Q4V328 841 aa25.18■■□□□ 1.62
SCARF1-204ENST00000570902 KIF6Q6ZMV9 814 aa25.18■■□□□ 1.62
SCARF1-204ENST00000570902 CNTROBQ8N137 903 aa25.18■■□□□ 1.62
SCARF1-204ENST00000570902 MAP3K15Q6ZN16 1313 aa25.17■■□□□ 1.62
SCARF1-204ENST00000570902 EIF6P56537 245 aaKnown RBP25.17■■□□□ 1.62
SCARF1-204ENST00000570902 NUTM1Q86Y26 1132 aa25.17■■□□□ 1.62
SCARF1-204ENST00000570902 NGEFQ8N5V2 710 aa25.17■■□□□ 1.62
SCARF1-204ENST00000570902 RPGRQ92834 1020 aaKnown RBP25.17■■□□□ 1.62
SCARF1-204ENST00000570902 SNED1Q8TER0 1413 aa25.17■■□□□ 1.62
SCARF1-204ENST00000570902 ABCC12Q96J65 1359 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms