RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 KIAA1551Q9HCM1 1747 aa16.37■□□□□ 0.21
CTDNEP1-205ENST00000570828 GIGYF1O75420 1035 aaPredicted RBP16.37■□□□□ 0.21
CTDNEP1-205ENST00000570828 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
CTDNEP1-205ENST00000570828 BCL2L12Q9HB09 334 aa16.37■□□□□ 0.21
CTDNEP1-205ENST00000570828 A1BGP04217 495 aa16.36■□□□□ 0.21
CTDNEP1-205ENST00000570828 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
CTDNEP1-205ENST00000570828 PIM2Q9P1W9 311 aa16.36■□□□□ 0.21
CTDNEP1-205ENST00000570828 PCDH10Q9P2E7 1040 aa16.36■□□□□ 0.21
CTDNEP1-205ENST00000570828 ADCY9O60503 1353 aa16.36■□□□□ 0.21
CTDNEP1-205ENST00000570828 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
CTDNEP1-205ENST00000570828 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
CTDNEP1-205ENST00000570828 PLEKHF1Q96S99 279 aa16.35■□□□□ 0.21
CTDNEP1-205ENST00000570828 TSPYL2Q9H2G4 693 aaPredicted RBP16.35■□□□□ 0.21
CTDNEP1-205ENST00000570828 N4BP2Q86UW6 1770 aaPredicted RBP16.34■□□□□ 0.21
CTDNEP1-205ENST00000570828 SERPINB2P05120 415 aa16.34■□□□□ 0.21
CTDNEP1-205ENST00000570828 POTEJP0CG39 1038 aa16.34■□□□□ 0.21
CTDNEP1-205ENST00000570828 KCNA3P22001 575 aa16.34■□□□□ 0.21
CTDNEP1-205ENST00000570828 CHRNA5P30532 468 aa16.34■□□□□ 0.21
CTDNEP1-205ENST00000570828 DALRD3Q5D0E6 543 aaKnown RBP16.34■□□□□ 0.21
CTDNEP1-205ENST00000570828 BICDL1Q6ZP65 573 aa16.34■□□□□ 0.21
CTDNEP1-205ENST00000570828 TBC1D2BQ9UPU7 963 aa16.34■□□□□ 0.21
CTDNEP1-205ENST00000570828 MYBBP1AQ9BQG0 1328 aaKnown RBP16.34■□□□□ 0.21
CTDNEP1-205ENST00000570828 C1QTNF8P60827 252 aa16.33■□□□□ 0.2
CTDNEP1-205ENST00000570828 ARHGAP27Q6ZUM4 889 aa16.33■□□□□ 0.2
CTDNEP1-205ENST00000570828 PNISRQ8TF01 805 aaKnown RBP16.33■□□□□ 0.2
CTDNEP1-205ENST00000570828 GPBP1L1Q9HC44 474 aaPredicted RBP16.33■□□□□ 0.2
CTDNEP1-205ENST00000570828 USP16Q9Y5T5 823 aa16.33■□□□□ 0.2
CTDNEP1-205ENST00000570828 SCN7AQ01118 1682 aa16.33■□□□□ 0.2
CTDNEP1-205ENST00000570828 PRAMEF22A3QJZ6 481 aa16.32■□□□□ 0.2
CTDNEP1-205ENST00000570828 TBC1D9BQ66K14 1250 aa16.32■□□□□ 0.2
CTDNEP1-205ENST00000570828 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
CTDNEP1-205ENST00000570828 CARMIL3Q8ND23 1372 aa16.32■□□□□ 0.2
CTDNEP1-205ENST00000570828 ZNF526Q8TF50 670 aaPredicted RBP16.32■□□□□ 0.2
CTDNEP1-205ENST00000570828 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
CTDNEP1-205ENST00000570828 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
CTDNEP1-205ENST00000570828 CAMTA2O94983 1202 aa16.3■□□□□ 0.2
CTDNEP1-205ENST00000570828 THUMPD2Q9BTF0 503 aaKnown RBP16.3■□□□□ 0.2
CTDNEP1-205ENST00000570828 NRXN2Q9P2S2 1712 aa16.29■□□□□ 0.2
CTDNEP1-205ENST00000570828 NPHP1O15259 732 aa16.29■□□□□ 0.2
CTDNEP1-205ENST00000570828 C2CD5Q86YS7 1000 aa16.29■□□□□ 0.2
CTDNEP1-205ENST00000570828 SETDB2Q96T68 719 aa16.29■□□□□ 0.2
CTDNEP1-205ENST00000570828 ZNF652Q9Y2D9 606 aa16.29■□□□□ 0.2
CTDNEP1-205ENST00000570828 H0YIN7 160 aa16.28■□□□□ 0.2
CTDNEP1-205ENST00000570828 CNBD1Q8NA66 436 aa16.28■□□□□ 0.2
CTDNEP1-205ENST00000570828 BRCA1P38398 1863 aaKnown RBP16.27■□□□□ 0.2
CTDNEP1-205ENST00000570828 RIPK4P57078 832 aa16.27■□□□□ 0.2
CTDNEP1-205ENST00000570828 LMOD3Q0VAK6 560 aa16.27■□□□□ 0.2
CTDNEP1-205ENST00000570828 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.2
CTDNEP1-205ENST00000570828 PRR5LQ6MZQ0 368 aa16.27■□□□□ 0.2
CTDNEP1-205ENST00000570828 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
CTDNEP1-205ENST00000570828 NBPF26B4DH59 902 aa16.26■□□□□ 0.19
CTDNEP1-205ENST00000570828 PDE6BP35913 854 aa16.26■□□□□ 0.19
CTDNEP1-205ENST00000570828 ATN1P54259 1190 aaPredicted RBP16.26■□□□□ 0.19
CTDNEP1-205ENST00000570828 ST5P78524 1137 aa16.26■□□□□ 0.19
CTDNEP1-205ENST00000570828 NBPF10Q6P3W6 841 aaKnown RBP16.26■□□□□ 0.19
CTDNEP1-205ENST00000570828 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
CTDNEP1-205ENST00000570828 NBPF15Q8N660 670 aa16.26■□□□□ 0.19
CTDNEP1-205ENST00000570828 PDZRN3Q9UPQ7 1066 aa16.26■□□□□ 0.19
CTDNEP1-205ENST00000570828 AFDNP55196 1824 aaKnown RBP16.25■□□□□ 0.19
CTDNEP1-205ENST00000570828 EIF4A1P60842 406 aaKnown RBP16.25■□□□□ 0.19
CTDNEP1-205ENST00000570828 C9orf131Q5VYM1 1079 aa16.25■□□□□ 0.19
CTDNEP1-205ENST00000570828 TTLL6Q8N841 843 aa16.25■□□□□ 0.19
CTDNEP1-205ENST00000570828 BRIP1Q9BX63 1249 aa16.25■□□□□ 0.19
CTDNEP1-205ENST00000570828 SCUBE2Q9NQ36 999 aa16.25■□□□□ 0.19
CTDNEP1-205ENST00000570828 TSPYL4Q9UJ04 414 aa16.25■□□□□ 0.19
CTDNEP1-205ENST00000570828 BCORQ6W2J9 1755 aa16.24■□□□□ 0.19
CTDNEP1-205ENST00000570828 RGL2O15211 777 aa16.24■□□□□ 0.19
CTDNEP1-205ENST00000570828 TMPOP42166 694 aaKnown RBP16.24■□□□□ 0.19
CTDNEP1-205ENST00000570828 NBPF5PQ86XG9 351 aaPredicted RBP16.24■□□□□ 0.19
CTDNEP1-205ENST00000570828 CCDC146Q8IYE0 955 aa16.24■□□□□ 0.19
CTDNEP1-205ENST00000570828 CCDC24Q8N4L8 307 aa16.24■□□□□ 0.19
CTDNEP1-205ENST00000570828 ARFGEF1Q9Y6D6 1849 aa16.24■□□□□ 0.19
CTDNEP1-205ENST00000570828 DLG5Q8TDM6 1919 aa16.23■□□□□ 0.19
CTDNEP1-205ENST00000570828 KDM3BQ7LBC6 1761 aa16.23■□□□□ 0.19
CTDNEP1-205ENST00000570828 ZNF622Q969S3 477 aaKnown RBP eCLIP16.23■□□□□ 0.19
CTDNEP1-205ENST00000570828 KIF12Q96FN5 646 aa16.23■□□□□ 0.19
CTDNEP1-205ENST00000570828 PRKRIP1Q9H875 184 aaPredicted RBP16.23■□□□□ 0.19
CTDNEP1-205ENST00000570828 RNF181Q9P0P0 153 aa16.23■□□□□ 0.19
CTDNEP1-205ENST00000570828 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
CTDNEP1-205ENST00000570828 NIP7Q9Y221 180 aaKnown RBP eCLIP16.22■□□□□ 0.19
CTDNEP1-205ENST00000570828 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
CTDNEP1-205ENST00000570828 ZEB1P37275 1124 aaPredicted RBP16.21■□□□□ 0.19
CTDNEP1-205ENST00000570828 RASSF7Q02833 373 aa16.21■□□□□ 0.19
CTDNEP1-205ENST00000570828 NEUROD2Q15784 382 aa16.21■□□□□ 0.19
CTDNEP1-205ENST00000570828 KIF6Q6ZMV9 814 aa16.21■□□□□ 0.19
CTDNEP1-205ENST00000570828 NGEFQ8N5V2 710 aa16.21■□□□□ 0.19
CTDNEP1-205ENST00000570828 RUNDC1Q96C34 613 aa16.21■□□□□ 0.19
CTDNEP1-205ENST00000570828 BABAM1Q9NWV8 329 aa16.21■□□□□ 0.19
CTDNEP1-205ENST00000570828 MYL6BP14649 208 aa16.2■□□□□ 0.18
CTDNEP1-205ENST00000570828 DLEC1Q9Y238 1755 aa16.2■□□□□ 0.18
CTDNEP1-205ENST00000570828 ERBB4Q15303 1308 aa16.19■□□□□ 0.18
CTDNEP1-205ENST00000570828 KIF3CO14782 793 aa16.19■□□□□ 0.18
CTDNEP1-205ENST00000570828 HLFQ16534 295 aa16.19■□□□□ 0.18
CTDNEP1-205ENST00000570828 TPTE2Q6XPS3 522 aa16.19■□□□□ 0.18
CTDNEP1-205ENST00000570828 ADAMTS8Q9UP79 889 aa16.19■□□□□ 0.18
CTDNEP1-205ENST00000570828 MAP3K15Q6ZN16 1313 aa16.19■□□□□ 0.18
CTDNEP1-205ENST00000570828 FAM177BA6PVY3 158 aa16.18■□□□□ 0.18
CTDNEP1-205ENST00000570828 ERVV-1B6SEH8 477 aa16.18■□□□□ 0.18
CTDNEP1-205ENST00000570828 LMNB1P20700 586 aa16.18■□□□□ 0.18
CTDNEP1-205ENST00000570828 STYK1Q6J9G0 422 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms