RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 IGSF3O75054 1194 aa18.31■□□□□ 0.52
SMG6-207ENST00000570756 NUTM1Q86Y26 1132 aa18.31■□□□□ 0.52
SMG6-207ENST00000570756 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
SMG6-207ENST00000570756 LARP6Q9BRS8 491 aaKnown RBP18.31■□□□□ 0.52
SMG6-207ENST00000570756 TRIM5Q9C035 493 aa18.31■□□□□ 0.52
SMG6-207ENST00000570756 TNMDQ9H2S6 317 aa18.31■□□□□ 0.52
SMG6-207ENST00000570756 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
SMG6-207ENST00000570756 PDRG1Q9NUG6 133 aa18.3■□□□□ 0.52
SMG6-207ENST00000570756 MIS18AQ9NYP9 233 aa18.3■□□□□ 0.52
SMG6-207ENST00000570756 XRN1Q8IZH2 1706 aaKnown RBP18.3■□□□□ 0.52
SMG6-207ENST00000570756 ZNF75DP51815 510 aa18.3■□□□□ 0.52
SMG6-207ENST00000570756 PLA2G4DQ86XP0 818 aa18.3■□□□□ 0.52
SMG6-207ENST00000570756 PI4K2BQ8TCG2 481 aa18.3■□□□□ 0.52
SMG6-207ENST00000570756 ITSN1Q15811 1721 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 LARGE1O95461 756 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 UBTFL1P0CB47 393 aaPredicted RBP18.29■□□□□ 0.52
SMG6-207ENST00000570756 LRMPQ12912 555 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 TPD52L1Q16890 204 aaPredicted RBP18.29■□□□□ 0.52
SMG6-207ENST00000570756 SSH3Q8TE77 659 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 RUFY2Q8WXA3 655 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 NUDT16Q96DE0 195 aaKnown RBP18.29■□□□□ 0.52
SMG6-207ENST00000570756 TM6SF1Q9BZW5 370 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 CBX8Q9HC52 389 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 DDX19AQ9NUU7 478 aaKnown RBP18.29■□□□□ 0.52
SMG6-207ENST00000570756 CCDC61Q9Y6R9 512 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 PXDNLA1KZ92 1463 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 N4BP2Q86UW6 1770 aaPredicted RBP18.29■□□□□ 0.52
SMG6-207ENST00000570756 GOLGA6L4A6NEF3 574 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 PDCP20941 246 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 ANO6Q4KMQ2 910 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 CYP46A1Q9Y6A2 500 aa18.29■□□□□ 0.52
SMG6-207ENST00000570756 AKAP12Q02952 1782 aa18.28■□□□□ 0.52
SMG6-207ENST00000570756 CCDC66A2RUB6 948 aa18.28■□□□□ 0.52
SMG6-207ENST00000570756 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
SMG6-207ENST00000570756 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
SMG6-207ENST00000570756 KRT222Q8N1A0 295 aa18.28■□□□□ 0.52
SMG6-207ENST00000570756 TDRD7Q8NHU6 1098 aaKnown RBP18.28■□□□□ 0.52
SMG6-207ENST00000570756 KIF18AQ8NI77 898 aa18.28■□□□□ 0.52
SMG6-207ENST00000570756 CACNA1FO60840 1977 aa18.28■□□□□ 0.52
SMG6-207ENST00000570756 CAVIN2O95810 425 aa18.28■□□□□ 0.52
SMG6-207ENST00000570756 CAMK4Q16566 473 aa18.28■□□□□ 0.52
SMG6-207ENST00000570756 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
SMG6-207ENST00000570756 SCAND2PQ9GZW5 306 aaPredicted RBP18.28■□□□□ 0.52
SMG6-207ENST00000570756 ZNF142P52746 1687 aaPredicted RBP18.27■□□□□ 0.52
SMG6-207ENST00000570756 CEP135Q66GS9 1140 aa18.27■□□□□ 0.52
SMG6-207ENST00000570756 CWC27Q6UX04 472 aaKnown RBP18.27■□□□□ 0.52
SMG6-207ENST00000570756 KIF1BPQ96EK5 621 aa18.27■□□□□ 0.52
SMG6-207ENST00000570756 JAKMIP1Q96N16 626 aaKnown RBP18.27■□□□□ 0.52
SMG6-207ENST00000570756 TTC21BQ7Z4L5 1316 aa18.27■□□□□ 0.52
SMG6-207ENST00000570756 FAM208AQ9UK61 1670 aaKnown RBP18.27■□□□□ 0.51
SMG6-207ENST00000570756 SURF6O75683 361 aaKnown RBP18.27■□□□□ 0.51
SMG6-207ENST00000570756 SLFN14P0C7P3 912 aa18.27■□□□□ 0.51
SMG6-207ENST00000570756 CDC25BP30305 580 aa18.27■□□□□ 0.51
SMG6-207ENST00000570756 LARP1BQ659C4 914 aaKnown RBP18.27■□□□□ 0.51
SMG6-207ENST00000570756 ZNF397Q8NF99 534 aaPredicted RBP18.27■□□□□ 0.51
SMG6-207ENST00000570756 RHPN1Q8TCX5 695 aa18.27■□□□□ 0.51
SMG6-207ENST00000570756 ZSWIM6Q9HCJ5 1215 aa18.27■□□□□ 0.51
SMG6-207ENST00000570756 CLIP2Q9UDT6 1046 aa18.27■□□□□ 0.51
SMG6-207ENST00000570756 RGPD1P0DJD0 1748 aa18.26■□□□□ 0.51
SMG6-207ENST00000570756 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
SMG6-207ENST00000570756 NEMFO60524 1076 aa18.26■□□□□ 0.51
SMG6-207ENST00000570756 LIG1P18858 919 aa18.26■□□□□ 0.51
SMG6-207ENST00000570756 BBXQ8WY36 941 aaPredicted RBP18.26■□□□□ 0.51
SMG6-207ENST00000570756 NCKAP5LQ9HCH0 1330 aa18.26■□□□□ 0.51
SMG6-207ENST00000570756 CPA1P15085 419 aa18.25■□□□□ 0.51
SMG6-207ENST00000570756 RBM43Q6ZSC3 357 aaKnown RBP18.25■□□□□ 0.51
SMG6-207ENST00000570756 CKAP2LQ8IYA6 745 aa18.25■□□□□ 0.51
SMG6-207ENST00000570756 DACT1Q9NYF0 836 aa18.25■□□□□ 0.51
SMG6-207ENST00000570756 NRBP1Q9UHY1 535 aa18.25■□□□□ 0.51
SMG6-207ENST00000570756 SPG7Q9UQ90 795 aa18.25■□□□□ 0.51
SMG6-207ENST00000570756 CHMP3Q9Y3E7 222 aa18.25■□□□□ 0.51
SMG6-207ENST00000570756 USP44Q9H0E7 712 aa18.25■□□□□ 0.51
SMG6-207ENST00000570756 TTC21AQ8NDW8 1320 aa18.25■□□□□ 0.51
SMG6-207ENST00000570756 MAP3K5Q99683 1374 aa18.25■□□□□ 0.51
SMG6-207ENST00000570756 FAM193AP78312 1265 aa18.24■□□□□ 0.51
SMG6-207ENST00000570756 TERF2Q15554 542 aa18.24■□□□□ 0.51
SMG6-207ENST00000570756 CLSTN2Q9H4D0 955 aa18.24■□□□□ 0.51
SMG6-207ENST00000570756 EID1Q9Y6B2 187 aa18.24■□□□□ 0.51
SMG6-207ENST00000570756 SETD1AO15047 1707 aaKnown RBP18.24■□□□□ 0.51
SMG6-207ENST00000570756 ZKSCAN1P17029 563 aaPredicted RBP18.24■□□□□ 0.51
SMG6-207ENST00000570756 ZNF165P49910 485 aa18.24■□□□□ 0.51
SMG6-207ENST00000570756 CRYBG1Q9Y4K1 1723 aa18.24■□□□□ 0.51
SMG6-207ENST00000570756 CHD2O14647 1828 aaKnown RBP18.23■□□□□ 0.51
SMG6-207ENST00000570756 POLA2Q14181 598 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 CACTINQ8WUQ7 758 aaKnown RBP18.23■□□□□ 0.51
SMG6-207ENST00000570756 KCNB2Q92953 911 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 SPATA32Q96LK8 384 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 SLIT1O75093 1534 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 LMTK3Q96Q04 1460 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 ARHGAP23Q9P227 1491 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 ADGRL3Q9HAR2 1447 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 GLRX3O76003 335 aaKnown RBP18.23■□□□□ 0.51
SMG6-207ENST00000570756 ME3Q16798 604 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 HSP90AB4PQ58FF6 505 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 ZNF592Q92610 1267 aa18.23■□□□□ 0.51
SMG6-207ENST00000570756 MTHFSDQ2M296 383 aaKnown RBP18.22■□□□□ 0.51
SMG6-207ENST00000570756 PRPF40BQ6NWY9 871 aaKnown RBP18.22■□□□□ 0.51
SMG6-207ENST00000570756 NRXN3Q9Y4C0 1643 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms