RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 PLEKHO1Q53GL0 409 aaPredicted RBP8.87□□□□□ -0.99
SMG6-204ENST00000570606 C1orf141Q5JVX7 400 aa8.87□□□□□ -0.99
SMG6-204ENST00000570606 MORC1Q86VD1 984 aa8.87□□□□□ -0.99
SMG6-204ENST00000570606 PANK3Q9H999 370 aa8.87□□□□□ -0.99
SMG6-204ENST00000570606 ATG3Q9NT62 314 aa8.87□□□□□ -0.99
SMG6-204ENST00000570606 KDM6AO15550 1401 aaPredicted RBP8.87□□□□□ -0.99
SMG6-204ENST00000570606 ADCY9O60503 1353 aa8.86□□□□□ -0.99
SMG6-204ENST00000570606 TJP1Q07157 1748 aa8.86□□□□□ -0.99
SMG6-204ENST00000570606 KIAA1551Q9HCM1 1747 aa8.86□□□□□ -0.99
SMG6-204ENST00000570606 GRXCR2A6NFK2 248 aa8.86□□□□□ -0.99
SMG6-204ENST00000570606 ERVV-2B6SEH9 535 aa8.86□□□□□ -0.99
SMG6-204ENST00000570606 MMP10P09238 476 aa8.86□□□□□ -0.99
SMG6-204ENST00000570606 OSBPP22059 807 aa8.86□□□□□ -0.99
SMG6-204ENST00000570606 C3orf67Q6ZVT6 689 aa8.86□□□□□ -0.99
SMG6-204ENST00000570606 ZNF526Q8TF50 670 aaPredicted RBP8.86□□□□□ -0.99
SMG6-204ENST00000570606 PTCD2Q8WV60 388 aaKnown RBP8.86□□□□□ -0.99
SMG6-204ENST00000570606 DCAF5Q96JK2 942 aa8.86□□□□□ -0.99
SMG6-204ENST00000570606 GPBP1L1Q9HC44 474 aaPredicted RBP8.86□□□□□ -0.99
SMG6-204ENST00000570606 RTCBQ9Y3I0 505 aaKnown RBP8.86□□□□□ -0.99
SMG6-204ENST00000570606 BRCA1P38398 1863 aaKnown RBP8.85□□□□□ -0.99
SMG6-204ENST00000570606 CEP350Q5VT06 3117 aa8.85□□□□□ -0.99
SMG6-204ENST00000570606 CNTNAP4Q9C0A0 1308 aa8.85□□□□□ -0.99
SMG6-204ENST00000570606 PXDNLA1KZ92 1463 aa8.85□□□□□ -0.99
SMG6-204ENST00000570606 CABP4P57796 275 aa8.85□□□□□ -0.99
SMG6-204ENST00000570606 AMOTQ4VCS5 1084 aa8.85□□□□□ -0.99
SMG6-204ENST00000570606 AEBP1Q8IUX7 1158 aa8.85□□□□□ -0.99
SMG6-204ENST00000570606 CCER1Q8TC90 406 aaPredicted RBP8.85□□□□□ -0.99
SMG6-204ENST00000570606 SP7Q8TDD2 431 aaPredicted RBP8.85□□□□□ -0.99
SMG6-204ENST00000570606 KNSTRNQ9Y448 316 aa8.85□□□□□ -0.99
SMG6-204ENST00000570606 GTF3C3Q9Y5Q9 886 aa8.85□□□□□ -0.99
SMG6-204ENST00000570606 C10orf71Q711Q0 1435 aa8.85□□□□□ -0.99
SMG6-204ENST00000570606 MTHFSP49914 203 aa8.84□□□□□ -0.99
SMG6-204ENST00000570606 TRAPPC3LQ5T215 181 aa8.84□□□□□ -0.99
SMG6-204ENST00000570606 ARFGEF1Q9Y6D6 1849 aa8.84□□□□□ -0.99
SMG6-204ENST00000570606 TBC1D12O60347 775 aa8.83□□□□□ -1
SMG6-204ENST00000570606 EVI5O60447 810 aa8.83□□□□□ -1
SMG6-204ENST00000570606 PTCD1O75127 700 aaKnown RBP8.83□□□□□ -1
SMG6-204ENST00000570606 SLC34A2O95436 690 aa8.83□□□□□ -1
SMG6-204ENST00000570606 RFC4P35249 363 aa8.83□□□□□ -1
SMG6-204ENST00000570606 SULT6B1Q6IMI4 303 aa8.83□□□□□ -1
SMG6-204ENST00000570606 NLGN1Q8N2Q7 840 aa8.83□□□□□ -1
SMG6-204ENST00000570606 SLC4A9Q96Q91 983 aa8.83□□□□□ -1
SMG6-204ENST00000570606 CCDC87Q9NVE4 849 aa8.83□□□□□ -1
SMG6-204ENST00000570606 PARP3Q9Y6F1 533 aa8.83□□□□□ -1
SMG6-204ENST00000570606 RC3H1Q5TC82 1133 aaKnown RBP8.82□□□□□ -1
SMG6-204ENST00000570606 DDX12PQ92771 950 aa8.82□□□□□ -1
SMG6-204ENST00000570606 BCS1LQ9Y276 419 aa8.82□□□□□ -1
SMG6-204ENST00000570606 MRC1P22897 1456 aa8.82□□□□□ -1
SMG6-204ENST00000570606 RPS6KA4O75676 772 aa8.81□□□□□ -1
SMG6-204ENST00000570606 GYS1P13807 737 aa8.81□□□□□ -1
SMG6-204ENST00000570606 CRKLP46109 303 aaKnown RBP8.81□□□□□ -1
SMG6-204ENST00000570606 TGFB2P61812 414 aa8.81□□□□□ -1
SMG6-204ENST00000570606 KRI1Q8N9T8 703 aaKnown RBP8.81□□□□□ -1
SMG6-204ENST00000570606 A0A0G2JLW4 131 aa8.8□□□□□ -1
SMG6-204ENST00000570606 FCHSD2O94868 740 aa8.8□□□□□ -1
SMG6-204ENST00000570606 IL13P35225 146 aa8.8□□□□□ -1
SMG6-204ENST00000570606 AKAP4Q5JQC9 854 aa8.8□□□□□ -1
SMG6-204ENST00000570606 NFATC2IPQ8NCF5 419 aa8.8□□□□□ -1
SMG6-204ENST00000570606 SRP68Q9UHB9 627 aaKnown RBP8.8□□□□□ -1
SMG6-204ENST00000570606 AFDNP55196 1824 aaKnown RBP8.8□□□□□ -1
SMG6-204ENST00000570606 USP42Q9H9J4 1324 aaKnown RBP8.8□□□□□ -1
SMG6-204ENST00000570606 UBR2Q8IWV8 1755 aa8.79□□□□□ -1
SMG6-204ENST00000570606 ADAMTS7Q9UKP4 1686 aa8.79□□□□□ -1
SMG6-204ENST00000570606 TRIM66O15016 1216 aa8.79□□□□□ -1
SMG6-204ENST00000570606 DPEP1P16444 411 aa8.79□□□□□ -1
SMG6-204ENST00000570606 HSPA6P17066 643 aa8.79□□□□□ -1
SMG6-204ENST00000570606 KIF7Q2M1P5 1343 aa8.79□□□□□ -1
SMG6-204ENST00000570606 HMOX1P09601 288 aa8.78□□□□□ -1
SMG6-204ENST00000570606 ARHGAP27Q6ZUM4 889 aa8.78□□□□□ -1
SMG6-204ENST00000570606 SLC52A2Q9HAB3 445 aa8.78□□□□□ -1
SMG6-204ENST00000570606 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.78□□□□□ -1
SMG6-204ENST00000570606 KCPQ6ZWJ8 1503 aa8.78□□□□□ -1
SMG6-204ENST00000570606 DLEC1Q9Y238 1755 aa8.78□□□□□ -1
SMG6-204ENST00000570606 SBF1O95248 1867 aa8.77□□□□□ -1.01
SMG6-204ENST00000570606 COL15A1P39059 1388 aa8.77□□□□□ -1.01
SMG6-204ENST00000570606 ZPR1O75312 459 aa8.77□□□□□ -1.01
SMG6-204ENST00000570606 CC2D1BQ5T0F9 858 aaKnown RBP8.77□□□□□ -1.01
SMG6-204ENST00000570606 DNAJC10Q8IXB1 793 aa8.77□□□□□ -1.01
SMG6-204ENST00000570606 TNRC6CQ9HCJ0 1690 aaKnown RBP8.77□□□□□ -1.01
SMG6-204ENST00000570606 SCN7AQ01118 1682 aa8.76□□□□□ -1.01
SMG6-204ENST00000570606 RNMTO43148 476 aaKnown RBP8.76□□□□□ -1.01
SMG6-204ENST00000570606 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
SMG6-204ENST00000570606 DDR1Q08345 913 aa8.76□□□□□ -1.01
SMG6-204ENST00000570606 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
SMG6-204ENST00000570606 SLC39A6Q13433 755 aa8.76□□□□□ -1.01
SMG6-204ENST00000570606 CNGB1Q14028 1251 aaPredicted RBP8.76□□□□□ -1.01
SMG6-204ENST00000570606 DALRD3Q5D0E6 543 aaKnown RBP8.76□□□□□ -1.01
SMG6-204ENST00000570606 USPL1Q5W0Q7 1092 aa8.76□□□□□ -1.01
SMG6-204ENST00000570606 PIM2Q9P1W9 311 aa8.76□□□□□ -1.01
SMG6-204ENST00000570606 NRXN2Q9P2S2 1712 aa8.76□□□□□ -1.01
SMG6-204ENST00000570606 SOS1Q07889 1333 aaPredicted RBP8.76□□□□□ -1.01
SMG6-204ENST00000570606 SIPA1L3O60292 1781 aaPredicted RBP8.76□□□□□ -1.01
SMG6-204ENST00000570606 CCDC88AQ3V6T2 1871 aa8.75□□□□□ -1.01
SMG6-204ENST00000570606 TIAM2Q8IVF5 1701 aa8.75□□□□□ -1.01
SMG6-204ENST00000570606 WDR90Q96KV7 1748 aa8.75□□□□□ -1.01
SMG6-204ENST00000570606 ZNF316A6NFI3 1004 aaPredicted RBP8.75□□□□□ -1.01
SMG6-204ENST00000570606 POLRMTO00411 1230 aaKnown RBP8.75□□□□□ -1.01
SMG6-204ENST00000570606 PDE4DQ08499 809 aa8.75□□□□□ -1.01
SMG6-204ENST00000570606 HIC1Q14526 733 aa8.75□□□□□ -1.01
SMG6-204ENST00000570606 C9orf131Q5VYM1 1079 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms