RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 TRIM5Q9C035 493 aa18.28■□□□□ 0.52
USP43-202ENST00000570475 MYO5BQ9ULV0 1848 aa18.28■□□□□ 0.52
USP43-202ENST00000570475 KCNA6P17658 529 aa18.28■□□□□ 0.52
USP43-202ENST00000570475 ZC3H6P61129 1189 aaKnown RBP18.28■□□□□ 0.52
USP43-202ENST00000570475 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
USP43-202ENST00000570475 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
USP43-202ENST00000570475 RBM8AQ9Y5S9 174 aaKnown RBP18.27■□□□□ 0.52
USP43-202ENST00000570475 UBE2HP62256 183 aa18.27■□□□□ 0.52
USP43-202ENST00000570475 CUL4AQ13619 759 aa18.27■□□□□ 0.52
USP43-202ENST00000570475 NBPF6Q5VWK0 638 aa18.27■□□□□ 0.52
USP43-202ENST00000570475 SASS6Q6UVJ0 657 aa18.27■□□□□ 0.52
USP43-202ENST00000570475 NBPF4Q96M43 638 aa18.27■□□□□ 0.52
USP43-202ENST00000570475 SETD1BQ9UPS6 1966 aaKnown RBP18.27■□□□□ 0.51
USP43-202ENST00000570475 NOLC1Q14978 699 aaKnown RBP eCLIP18.26■□□□□ 0.51
USP43-202ENST00000570475 SSH3Q8TE77 659 aa18.26■□□□□ 0.51
USP43-202ENST00000570475 NLRP2Q9NX02 1062 aa18.26■□□□□ 0.51
USP43-202ENST00000570475 PROSER3Q2NL68 480 aa18.26■□□□□ 0.51
USP43-202ENST00000570475 RGS12O14924 1447 aa18.26■□□□□ 0.51
USP43-202ENST00000570475 RAD50Q92878 1312 aa18.26■□□□□ 0.51
USP43-202ENST00000570475 KRT85P78386 507 aa18.26■□□□□ 0.51
USP43-202ENST00000570475 NEXNQ0ZGT2 675 aa18.25■□□□□ 0.51
USP43-202ENST00000570475 TNMDQ9H2S6 317 aa18.25■□□□□ 0.51
USP43-202ENST00000570475 MAP3K5Q99683 1374 aa18.25■□□□□ 0.51
USP43-202ENST00000570475 CCDC192P0DO97 292 aa18.25■□□□□ 0.51
USP43-202ENST00000570475 NMIQ13287 307 aaPredicted RBP18.25■□□□□ 0.51
USP43-202ENST00000570475 A0A0G2JS52 829 aa18.24■□□□□ 0.51
USP43-202ENST00000570475 GUCY1B3Q02153 619 aa18.24■□□□□ 0.51
USP43-202ENST00000570475 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
USP43-202ENST00000570475 SPATA32Q96LK8 384 aa18.24■□□□□ 0.51
USP43-202ENST00000570475 TSPOAP1O95153 1857 aa18.24■□□□□ 0.51
USP43-202ENST00000570475 CBX1P83916 185 aa18.24■□□□□ 0.51
USP43-202ENST00000570475 RNF20Q5VTR2 975 aa18.24■□□□□ 0.51
USP43-202ENST00000570475 CRB1P82279 1406 aa18.24■□□□□ 0.51
USP43-202ENST00000570475 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
USP43-202ENST00000570475 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
USP43-202ENST00000570475 NUP62CLQ9H1M0 184 aa18.24■□□□□ 0.51
USP43-202ENST00000570475 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.24■□□□□ 0.51
USP43-202ENST00000570475 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
USP43-202ENST00000570475 HS1BP3Q53T59 392 aa18.23■□□□□ 0.51
USP43-202ENST00000570475 LUZP1Q86V48 1076 aa18.23■□□□□ 0.51
USP43-202ENST00000570475 PDLIM2Q96JY6 352 aa18.23■□□□□ 0.51
USP43-202ENST00000570475 DBF4Q9UBU7 674 aaPredicted RBP18.23■□□□□ 0.51
USP43-202ENST00000570475 PHF8Q9UPP1 1060 aa18.23■□□□□ 0.51
USP43-202ENST00000570475 USP6P35125 1406 aa18.23■□□□□ 0.51
USP43-202ENST00000570475 ATP5J2-PTCD1G3V325 749 aa18.23■□□□□ 0.51
USP43-202ENST00000570475 PTCD1O75127 700 aaKnown RBP18.23■□□□□ 0.51
USP43-202ENST00000570475 PI4K2BQ8TCG2 481 aa18.23■□□□□ 0.51
USP43-202ENST00000570475 LSG1Q9H089 658 aaKnown RBP18.23■□□□□ 0.51
USP43-202ENST00000570475 STAP2Q9UGK3 403 aa18.23■□□□□ 0.51
USP43-202ENST00000570475 ZNF500O60304 480 aaPredicted RBP18.22■□□□□ 0.51
USP43-202ENST00000570475 DDX58O95786 925 aaKnown RBP18.22■□□□□ 0.51
USP43-202ENST00000570475 ME3Q16798 604 aa18.22■□□□□ 0.51
USP43-202ENST00000570475 DACT1Q9NYF0 836 aa18.22■□□□□ 0.51
USP43-202ENST00000570475 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
USP43-202ENST00000570475 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
USP43-202ENST00000570475 MYD88Q99836 296 aa18.22■□□□□ 0.51
USP43-202ENST00000570475 TMEM2Q9UHN6 1383 aa18.21■□□□□ 0.51
USP43-202ENST00000570475 SPDYE4A6NLX3 237 aa18.21■□□□□ 0.51
USP43-202ENST00000570475 NPHP1O15259 732 aa18.21■□□□□ 0.51
USP43-202ENST00000570475 EIF4A1P60842 406 aaKnown RBP18.21■□□□□ 0.51
USP43-202ENST00000570475 PPP6R1Q9UPN7 881 aa18.21■□□□□ 0.51
USP43-202ENST00000570475 TMEM131LA2VDJ0 1609 aa18.21■□□□□ 0.51
USP43-202ENST00000570475 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.51
USP43-202ENST00000570475 CREB3L3Q68CJ9 461 aa18.21■□□□□ 0.51
USP43-202ENST00000570475 CDC37L1Q7L3B6 337 aa18.21■□□□□ 0.51
USP43-202ENST00000570475 CCDC85AQ96PX6 553 aaPredicted RBP18.21■□□□□ 0.51
USP43-202ENST00000570475 TLR7Q9NYK1 1049 aaKnown RBP18.21■□□□□ 0.51
USP43-202ENST00000570475 PSMA5P28066 241 aa18.2■□□□□ 0.5
USP43-202ENST00000570475 MAP3K11Q16584 847 aa18.2■□□□□ 0.5
USP43-202ENST00000570475 C16orf45Q96MC5 204 aaPredicted RBP18.2■□□□□ 0.5
USP43-202ENST00000570475 FMNL2Q96PY5 1086 aa18.2■□□□□ 0.5
USP43-202ENST00000570475 BICC1Q9H694 974 aaKnown RBP18.2■□□□□ 0.5
USP43-202ENST00000570475 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
USP43-202ENST00000570475 BECN2A8MW95 431 aa18.2■□□□□ 0.5
USP43-202ENST00000570475 GOLGA6L19H0YKK7 550 aa18.2■□□□□ 0.5
USP43-202ENST00000570475 LETM1O95202 739 aaPredicted RBP18.2■□□□□ 0.5
USP43-202ENST00000570475 BEND3Q5T5X7 828 aa18.2■□□□□ 0.5
USP43-202ENST00000570475 CCT2P78371 535 aaKnown RBP18.19■□□□□ 0.5
USP43-202ENST00000570475 TPCN1Q9ULQ1 816 aa18.19■□□□□ 0.5
USP43-202ENST00000570475 IGSF3O75054 1194 aa18.19■□□□□ 0.5
USP43-202ENST00000570475 PTGS1P23219 599 aa18.19■□□□□ 0.5
USP43-202ENST00000570475 DDX46Q7L014 1031 aaKnown RBP18.19■□□□□ 0.5
USP43-202ENST00000570475 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
USP43-202ENST00000570475 HYPKQ9NX55 129 aa18.19■□□□□ 0.5
USP43-202ENST00000570475 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
USP43-202ENST00000570475 LIG1P18858 919 aa18.18■□□□□ 0.5
USP43-202ENST00000570475 MCM5P33992 734 aa18.18■□□□□ 0.5
USP43-202ENST00000570475 RAB11FIP4Q86YS3 637 aa18.18■□□□□ 0.5
USP43-202ENST00000570475 THEMISQ8N1K5 641 aaPredicted RBP18.18■□□□□ 0.5
USP43-202ENST00000570475 EAF2Q96CJ1 260 aaPredicted RBP18.18■□□□□ 0.5
USP43-202ENST00000570475 ZSCAN31Q96LW9 406 aaPredicted RBP18.18■□□□□ 0.5
USP43-202ENST00000570475 LARP1Q6PKG0 1096 aaKnown RBP18.18■□□□□ 0.5
USP43-202ENST00000570475 FILIP1Q7Z7B0 1213 aa18.18■□□□□ 0.5
USP43-202ENST00000570475 ERC1Q8IUD2 1116 aa18.18■□□□□ 0.5
USP43-202ENST00000570475 ZHX1Q9UKY1 873 aaPredicted RBP18.18■□□□□ 0.5
USP43-202ENST00000570475 MTMR6Q9Y217 621 aa18.18■□□□□ 0.5
USP43-202ENST00000570475 CHST3Q7LGC8 479 aa18.18■□□□□ 0.5
USP43-202ENST00000570475 SUCLG2Q96I99 432 aa18.18■□□□□ 0.5
USP43-202ENST00000570475 KIF3AQ9Y496 699 aa18.18■□□□□ 0.5
USP43-202ENST00000570475 A0A087WWV3 80 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms