RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 TAF1LQ8IZX4 1826 aa19.52■□□□□ 0.71
HERPUD1-219ENST00000570273 BAG6P46379 1132 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 CCT4P50991 539 aaKnown RBP19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 INTS3Q68E01 1043 aaKnown RBP19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 ANKRD13DQ6ZTN6 518 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 PLBD2Q8NHP8 589 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 AK7Q96M32 723 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 ARXQ96QS3 562 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 COL15A1P39059 1388 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 GNPATO15228 680 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 EIF5P55010 431 aaKnown RBP19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 ERICH6BQ5W0A0 696 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 CAMKK2Q96RR4 588 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 ZBTB3Q9H5J0 574 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
HERPUD1-219ENST00000570273 NUP188Q5SRE5 1749 aa19.5■□□□□ 0.71
HERPUD1-219ENST00000570273 ATP10DQ9P241 1426 aa19.5■□□□□ 0.71
HERPUD1-219ENST00000570273 MYH14Q7Z406 1995 aaKnown RBP19.5■□□□□ 0.71
HERPUD1-219ENST00000570273 HMGB2P26583 209 aaKnown RBP19.5■□□□□ 0.71
HERPUD1-219ENST00000570273 PROM2Q8N271 834 aa19.5■□□□□ 0.71
HERPUD1-219ENST00000570273 DZIP3Q86Y13 1208 aaKnown RBP19.49■□□□□ 0.71
HERPUD1-219ENST00000570273 SRCIN1Q9C0H9 1055 aa19.49■□□□□ 0.71
HERPUD1-219ENST00000570273 MAP3K15Q6ZN16 1313 aa19.48■□□□□ 0.71
HERPUD1-219ENST00000570273 N4BP2Q86UW6 1770 aaPredicted RBP19.48■□□□□ 0.71
HERPUD1-219ENST00000570273 ARFGEF2Q9Y6D5 1785 aa19.48■□□□□ 0.71
HERPUD1-219ENST00000570273 A0A087WZG4 1122 aa19.48■□□□□ 0.71
HERPUD1-219ENST00000570273 RPS6KA4O75676 772 aa19.48■□□□□ 0.71
HERPUD1-219ENST00000570273 EN1Q05925 392 aaPredicted RBP19.48■□□□□ 0.71
HERPUD1-219ENST00000570273 NEXNQ0ZGT2 675 aa19.48■□□□□ 0.71
HERPUD1-219ENST00000570273 MYD88Q99836 296 aa19.48■□□□□ 0.71
HERPUD1-219ENST00000570273 METTL22Q9BUU2 404 aaPredicted RBP19.48■□□□□ 0.71
HERPUD1-219ENST00000570273 RTCBQ9Y3I0 505 aaKnown RBP19.48■□□□□ 0.71
HERPUD1-219ENST00000570273 BEND3Q5T5X7 828 aa19.47■□□□□ 0.71
HERPUD1-219ENST00000570273 EZH2Q15910 746 aaKnown RBP19.46■□□□□ 0.71
HERPUD1-219ENST00000570273 CHMP4BQ9H444 224 aaKnown RBP19.46■□□□□ 0.71
HERPUD1-219ENST00000570273 TBC1D2BQ9UPU7 963 aa19.46■□□□□ 0.71
HERPUD1-219ENST00000570273 LINS1Q8NG48 757 aa19.45■□□□□ 0.7
HERPUD1-219ENST00000570273 ALDH1L1O75891 902 aa19.44■□□□□ 0.7
HERPUD1-219ENST00000570273 PHF14O94880 888 aa19.44■□□□□ 0.7
HERPUD1-219ENST00000570273 ERVV-1B6SEH8 477 aa19.43■□□□□ 0.7
HERPUD1-219ENST00000570273 CWF19L2Q2TBE0 894 aaKnown RBP19.43■□□□□ 0.7
HERPUD1-219ENST00000570273 SMIM5Q71RC9 77 aa19.43■□□□□ 0.7
HERPUD1-219ENST00000570273 ZBTB7BO15156 539 aaPredicted RBP19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 CAMTA2O94983 1202 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 IGKV5-2P06315 115 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 AAMPQ13685 434 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 ZNF827Q17R98 1081 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 GIGYF2Q6Y7W6 1299 aaKnown RBP19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 MEIS3Q99687 375 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 NEURL1BA8MQ27 555 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 ATP5J2-PTCD1G3V325 749 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 ADRA2BP18089 450 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 HLFQ16534 295 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 HSP90AB3PQ58FF7 597 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 AMIGO3Q86WK7 504 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 PPP4R2Q9NY27 417 aa19.42■□□□□ 0.7
HERPUD1-219ENST00000570273 SCN7AQ01118 1682 aa19.41■□□□□ 0.7
HERPUD1-219ENST00000570273 SSFA2P28290 1259 aa19.41■□□□□ 0.7
HERPUD1-219ENST00000570273 TCIRG1Q13488 830 aa19.41■□□□□ 0.7
HERPUD1-219ENST00000570273 TRAPPC3LQ5T215 181 aa19.41■□□□□ 0.7
HERPUD1-219ENST00000570273 AKT1S1Q96B36 256 aa19.41■□□□□ 0.7
HERPUD1-219ENST00000570273 ZBTB40Q9NUA8 1239 aa19.41■□□□□ 0.7
HERPUD1-219ENST00000570273 ZNF652Q9Y2D9 606 aa19.41■□□□□ 0.7
HERPUD1-219ENST00000570273 BCORQ6W2J9 1755 aa19.4■□□□□ 0.7
HERPUD1-219ENST00000570273 UBR3Q6ZT12 1888 aa19.4■□□□□ 0.7
HERPUD1-219ENST00000570273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.4■□□□□ 0.7
HERPUD1-219ENST00000570273 GNAI3P08754 354 aa19.4■□□□□ 0.7
HERPUD1-219ENST00000570273 ARHGEF1Q92888 912 aaKnown RBP19.4■□□□□ 0.7
HERPUD1-219ENST00000570273 IBTKQ9P2D0 1353 aaPredicted RBP19.39■□□□□ 0.69
HERPUD1-219ENST00000570273 ZPR1O75312 459 aa19.39■□□□□ 0.69
HERPUD1-219ENST00000570273 RFC4P35249 363 aa19.39■□□□□ 0.69
HERPUD1-219ENST00000570273 ISCA1Q9BUE6 129 aa19.39■□□□□ 0.69
HERPUD1-219ENST00000570273 CWC25Q9NXE8 425 aaPredicted RBP19.39■□□□□ 0.69
HERPUD1-219ENST00000570273 C9orf78Q9NZ63 289 aaPredicted RBP19.39■□□□□ 0.69
HERPUD1-219ENST00000570273 TFCP2L1Q9NZI6 479 aa19.39■□□□□ 0.69
HERPUD1-219ENST00000570273 SRP68Q9UHB9 627 aaKnown RBP19.39■□□□□ 0.69
HERPUD1-219ENST00000570273 NARFQ9UHQ1 456 aa19.39■□□□□ 0.69
HERPUD1-219ENST00000570273 C4AP0C0L4 1744 aa19.38■□□□□ 0.69
HERPUD1-219ENST00000570273 UBTFL1P0CB47 393 aaPredicted RBP19.38■□□□□ 0.69
HERPUD1-219ENST00000570273 GPTP24298 496 aa19.38■□□□□ 0.69
HERPUD1-219ENST00000570273 GCKRQ14397 625 aa19.38■□□□□ 0.69
HERPUD1-219ENST00000570273 USP44Q9H0E7 712 aa19.38■□□□□ 0.69
HERPUD1-219ENST00000570273 C1orf115Q9H7X2 142 aa19.38■□□□□ 0.69
HERPUD1-219ENST00000570273 USP42Q9H9J4 1324 aaKnown RBP19.37■□□□□ 0.69
HERPUD1-219ENST00000570273 AFDNP55196 1824 aaKnown RBP19.37■□□□□ 0.69
HERPUD1-219ENST00000570273 GRM8O00222 908 aa19.37■□□□□ 0.69
HERPUD1-219ENST00000570273 USPL1Q5W0Q7 1092 aa19.37■□□□□ 0.69
HERPUD1-219ENST00000570273 CCDC191Q8NCU4 936 aa19.37■□□□□ 0.69
HERPUD1-219ENST00000570273 ANO8Q9HCE9 1232 aaPredicted RBP19.37■□□□□ 0.69
HERPUD1-219ENST00000570273 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
HERPUD1-219ENST00000570273 ANKRD36CQ5JPF3 1778 aa19.37■□□□□ 0.69
HERPUD1-219ENST00000570273 RGL2O15211 777 aa19.36■□□□□ 0.69
HERPUD1-219ENST00000570273 GNAI2P04899 355 aa19.35■□□□□ 0.69
HERPUD1-219ENST00000570273 TRIM28Q13263 835 aaKnown RBP19.35■□□□□ 0.69
HERPUD1-219ENST00000570273 CLEC4GQ6UXB4 293 aa19.35■□□□□ 0.69
HERPUD1-219ENST00000570273 CCDC136Q96JN2 1154 aa19.35■□□□□ 0.69
HERPUD1-219ENST00000570273 NUP98P52948 1817 aa19.35■□□□□ 0.69
HERPUD1-219ENST00000570273 NBPF7P0C2Y1 421 aaPredicted RBP19.34■□□□□ 0.69
HERPUD1-219ENST00000570273 NLRP10Q86W26 655 aa19.34■□□□□ 0.69
HERPUD1-219ENST00000570273 ZNF34Q8IZ26 560 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms