RNA–Protein interactions for RNA: ENST00000569957.5

INO80E-213, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 4,469 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-213ENST00000569957 NUP133Q8WUM0 1156 aa14.99□□□□□ -0.01
INO80E-213ENST00000569957 USP32Q8NFA0 1604 aa14.99□□□□□ -0.01
INO80E-213ENST00000569957 ZBTB40Q9NUA8 1239 aa14.99□□□□□ -0.01
INO80E-213ENST00000569957 ESPNB1AK53 854 aa14.99□□□□□ -0.01
INO80E-213ENST00000569957 NUCB1Q02818 461 aa14.99□□□□□ -0.01
INO80E-213ENST00000569957 RAB11FIP4Q86YS3 637 aa14.99□□□□□ -0.01
INO80E-213ENST00000569957 GOLGA6L1Q8N7Z2 621 aa14.99□□□□□ -0.01
INO80E-213ENST00000569957 CCDC39Q9UFE4 941 aa14.99□□□□□ -0.01
INO80E-213ENST00000569957 PTPRCP08575 1304 aa14.99□□□□□ -0.01
INO80E-213ENST00000569957 GUCY1B3Q02153 619 aa14.98□□□□□ -0.01
INO80E-213ENST00000569957 BMP2KLQ5H9B9 411 aa14.98□□□□□ -0.01
INO80E-213ENST00000569957 HOXC9P31274 260 aa14.98□□□□□ -0.01
INO80E-213ENST00000569957 AMOTL1Q8IY63 956 aa14.98□□□□□ -0.01
INO80E-213ENST00000569957 EXOC5O00471 708 aa14.98□□□□□ -0.01
INO80E-213ENST00000569957 MCM2P49736 904 aa14.98□□□□□ -0.01
INO80E-213ENST00000569957 CCAR2Q8N163 923 aaKnown RBP14.98□□□□□ -0.01
INO80E-213ENST00000569957 RHPN1Q8TCX5 695 aa14.98□□□□□ -0.01
INO80E-213ENST00000569957 TBC1D32Q96NH3 1257 aa14.98□□□□□ -0.01
INO80E-213ENST00000569957 HYPKQ9NX55 129 aa14.98□□□□□ -0.01
INO80E-213ENST00000569957 LRP2BPQ9P2M1 347 aa14.98□□□□□ -0.01
INO80E-213ENST00000569957 HIP1O00291 1037 aa14.97□□□□□ -0.01
INO80E-213ENST00000569957 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
INO80E-213ENST00000569957 IFIT1P09914 478 aaKnown RBP14.97□□□□□ -0.01
INO80E-213ENST00000569957 ATP2B2Q01814 1243 aa14.97□□□□□ -0.01
INO80E-213ENST00000569957 SAFBQ15424 915 aaKnown RBP eCLIP14.97□□□□□ -0.01
INO80E-213ENST00000569957 DDX46Q7L014 1031 aaKnown RBP14.97□□□□□ -0.01
INO80E-213ENST00000569957 MED14O60244 1454 aa14.97□□□□□ -0.01
INO80E-213ENST00000569957 RAB11FIP3O75154 756 aa14.97□□□□□ -0.01
INO80E-213ENST00000569957 HDAC1Q13547 482 aaPredicted RBP14.97□□□□□ -0.01
INO80E-213ENST00000569957 RAI14Q9P0K7 980 aa14.97□□□□□ -0.01
INO80E-213ENST00000569957 IQSEC3Q9UPP2 1182 aaPredicted RBP14.97□□□□□ -0.01
INO80E-213ENST00000569957 GOLIM4O00461 696 aa14.96□□□□□ -0.01
INO80E-213ENST00000569957 HAND2P61296 217 aa14.96□□□□□ -0.01
INO80E-213ENST00000569957 SPC24Q8NBT2 197 aa14.96□□□□□ -0.01
INO80E-213ENST00000569957 SBNO1A3KN83 1393 aa14.96□□□□□ -0.01
INO80E-213ENST00000569957 TEX35Q5T0J7 233 aa14.96□□□□□ -0.01
INO80E-213ENST00000569957 ANKRD44Q8N8A2 993 aa14.96□□□□□ -0.01
INO80E-213ENST00000569957 TRIM34Q9BYJ4 488 aa14.96□□□□□ -0.01
INO80E-213ENST00000569957 PDE1AP54750 535 aa14.96□□□□□ -0.02
INO80E-213ENST00000569957 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.02
INO80E-213ENST00000569957 IFIT5Q13325 482 aaKnown RBP14.95□□□□□ -0.02
INO80E-213ENST00000569957 TTC22Q5TAA0 569 aa14.95□□□□□ -0.02
INO80E-213ENST00000569957 ECHDC1Q9NTX5 307 aa14.95□□□□□ -0.02
INO80E-213ENST00000569957 ZNF521Q96K83 1311 aa14.95□□□□□ -0.02
INO80E-213ENST00000569957 KLHDC4Q8TBB5 520 aa14.95□□□□□ -0.02
INO80E-213ENST00000569957 IP6K1Q92551 441 aa14.95□□□□□ -0.02
INO80E-213ENST00000569957 LRRC2Q9BYS8 371 aa14.95□□□□□ -0.02
INO80E-213ENST00000569957 PDCL3Q9H2J4 239 aa14.95□□□□□ -0.02
INO80E-213ENST00000569957 LDHAL6AQ6ZMR3 332 aa14.95□□□□□ -0.02
INO80E-213ENST00000569957 SNRPA1P09661 255 aaKnown RBP14.94□□□□□ -0.02
INO80E-213ENST00000569957 ME1P48163 572 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 SLC4A8Q2Y0W8 1093 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 LMBR1LQ6UX01 489 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 TNPO1Q92973 898 aaKnown RBP14.94□□□□□ -0.02
INO80E-213ENST00000569957 PDCP20941 246 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 ARHGAP45Q92619 1136 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 TDO2P48775 406 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 NBPF6Q5VWK0 638 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 NBPF4Q96M43 638 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 MINDY4BA8MYZ0 360 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 ZBTB7BO15156 539 aaPredicted RBP14.94□□□□□ -0.02
INO80E-213ENST00000569957 GPS2Q13227 327 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 TAF3Q5VWG9 929 aa14.94□□□□□ -0.02
INO80E-213ENST00000569957 KIF13AQ9H1H9 1805 aa14.93□□□□□ -0.02
INO80E-213ENST00000569957 PRR36Q9H6K5 1346 aa14.93□□□□□ -0.02
INO80E-213ENST00000569957 SYCE3A1L190 88 aa14.93□□□□□ -0.02
INO80E-213ENST00000569957 CCT2P78371 535 aaKnown RBP14.93□□□□□ -0.02
INO80E-213ENST00000569957 STK38Q15208 465 aa14.93□□□□□ -0.02
INO80E-213ENST00000569957 ZCRB1Q8TBF4 217 aaKnown RBP14.93□□□□□ -0.02
INO80E-213ENST00000569957 PIK3R4Q99570 1358 aa14.93□□□□□ -0.02
INO80E-213ENST00000569957 CEP85Q6P2H3 762 aa14.93□□□□□ -0.02
INO80E-213ENST00000569957 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.93□□□□□ -0.022e-7■■■□□ 15.2
INO80E-213ENST00000569957 TFIP11Q9UBB9 837 aaKnown RBP14.93□□□□□ -0.02
INO80E-213ENST00000569957 TPM3P06753 285 aa14.92□□□□□ -0.02
INO80E-213ENST00000569957 CAMK4Q16566 473 aa14.92□□□□□ -0.02
INO80E-213ENST00000569957 TRIM5Q9C035 493 aa14.92□□□□□ -0.02
INO80E-213ENST00000569957 WDR33Q9C0J8 1336 aaKnown RBP14.92□□□□□ -0.02
INO80E-213ENST00000569957 NPHP4O75161 1426 aaPredicted RBP14.92□□□□□ -0.02
INO80E-213ENST00000569957 KCNQ3O43525 872 aa14.92□□□□□ -0.02
INO80E-213ENST00000569957 IKQ13123 557 aaPredicted RBP14.92□□□□□ -0.02
INO80E-213ENST00000569957 SART3Q15020 963 aaKnown RBP14.92□□□□□ -0.02
INO80E-213ENST00000569957 CWC22Q9HCG8 908 aaKnown RBP14.92□□□□□ -0.02
INO80E-213ENST00000569957 NECAB1Q8N987 351 aa14.92□□□□□ -0.02
INO80E-213ENST00000569957 GRPEL1Q9HAV7 217 aa14.92□□□□□ -0.02
INO80E-213ENST00000569957 MYO5BQ9ULV0 1848 aa14.91□□□□□ -0.02
INO80E-213ENST00000569957 KINO60870 393 aaKnown RBP14.91□□□□□ -0.02
INO80E-213ENST00000569957 MBD3O95983 291 aa14.91□□□□□ -0.02
INO80E-213ENST00000569957 ZMYND15Q9H091 742 aa14.91□□□□□ -0.02
INO80E-213ENST00000569957 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
INO80E-213ENST00000569957 AKAP4Q5JQC9 854 aa14.91□□□□□ -0.02
INO80E-213ENST00000569957 GRM8O00222 908 aa14.91□□□□□ -0.02
INO80E-213ENST00000569957 HELBQ8NG08 1087 aaPredicted RBP14.91□□□□□ -0.02
INO80E-213ENST00000569957 AIDAQ96BJ3 306 aa14.91□□□□□ -0.02
INO80E-213ENST00000569957 IGHMBP2P38935 993 aaKnown RBP14.9□□□□□ -0.02
INO80E-213ENST00000569957 SMC5Q8IY18 1101 aa14.9□□□□□ -0.02
INO80E-213ENST00000569957 AATKQ6ZMQ8 1374 aa14.9□□□□□ -0.02
INO80E-213ENST00000569957 SETQ01105 290 aaPredicted RBP14.9□□□□□ -0.02
INO80E-213ENST00000569957 TRMT2AQ8IZ69 625 aaKnown RBP14.9□□□□□ -0.02
INO80E-213ENST00000569957 KRT85P78386 507 aa14.9□□□□□ -0.02
INO80E-213ENST00000569957 HSP90AB3PQ58FF7 597 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms