RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 DZIP3Q86Y13 1208 aaKnown RBP16.22■□□□□ 0.19
CAPN3-220ENST00000569827 BRIP1Q9BX63 1249 aa16.22■□□□□ 0.19
CAPN3-220ENST00000569827 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
CAPN3-220ENST00000569827 SCN4AP35499 1836 aa16.22■□□□□ 0.19
CAPN3-220ENST00000569827 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
CAPN3-220ENST00000569827 PRPF40BQ6NWY9 871 aaKnown RBP16.21■□□□□ 0.19
CAPN3-220ENST00000569827 MCM10Q7L590 875 aa16.21■□□□□ 0.19
CAPN3-220ENST00000569827 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
CAPN3-220ENST00000569827 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.18
CAPN3-220ENST00000569827 FAM177BA6PVY3 158 aa16.2■□□□□ 0.18
CAPN3-220ENST00000569827 DDNO94850 711 aaPredicted RBP16.2■□□□□ 0.18
CAPN3-220ENST00000569827 HSPA1AP0DMV8 641 aaKnown RBP16.2■□□□□ 0.18
CAPN3-220ENST00000569827 HSPA1BP0DMV9 641 aaKnown RBP16.2■□□□□ 0.18
CAPN3-220ENST00000569827 OLFM4Q6UX06 510 aa16.2■□□□□ 0.18
CAPN3-220ENST00000569827 TEX13AQ9BXU3 409 aaPredicted RBP16.2■□□□□ 0.18
CAPN3-220ENST00000569827 TAOK3Q9H2K8 898 aa16.2■□□□□ 0.18
CAPN3-220ENST00000569827 NPC1L1Q9UHC9 1359 aa16.2■□□□□ 0.18
CAPN3-220ENST00000569827 ST5P78524 1137 aa16.19■□□□□ 0.18
CAPN3-220ENST00000569827 NPM2Q86SE8 214 aaKnown RBP16.19■□□□□ 0.18
CAPN3-220ENST00000569827 SRGNP10124 158 aa16.18■□□□□ 0.18
CAPN3-220ENST00000569827 DPY19L2Q6NUT2 758 aa16.18■□□□□ 0.18
CAPN3-220ENST00000569827 TNS4Q8IZW8 715 aa16.18■□□□□ 0.18
CAPN3-220ENST00000569827 NBPF5PQ86XG9 351 aaPredicted RBP16.17■□□□□ 0.18
CAPN3-220ENST00000569827 MKRN1Q9UHC7 482 aaKnown RBP16.17■□□□□ 0.18
CAPN3-220ENST00000569827 NBPF26B4DH59 902 aa16.16■□□□□ 0.18
CAPN3-220ENST00000569827 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-220ENST00000569827 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
CAPN3-220ENST00000569827 STYK1Q6J9G0 422 aa16.16■□□□□ 0.18
CAPN3-220ENST00000569827 NBPF10Q6P3W6 841 aaKnown RBP16.16■□□□□ 0.18
CAPN3-220ENST00000569827 NBPF15Q8N660 670 aa16.16■□□□□ 0.18
CAPN3-220ENST00000569827 CNKSR1Q969H4 720 aa16.16■□□□□ 0.18
CAPN3-220ENST00000569827 MASTLQ96GX5 879 aa16.16■□□□□ 0.18
CAPN3-220ENST00000569827 MIS18AQ9NYP9 233 aa16.16■□□□□ 0.18
CAPN3-220ENST00000569827 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
CAPN3-220ENST00000569827 ZNF541Q9H0D2 1346 aa16.15■□□□□ 0.18
CAPN3-220ENST00000569827 LTBP3Q9NS15 1303 aa16.15■□□□□ 0.18
CAPN3-220ENST00000569827 PPP2R1AP30153 589 aa16.14■□□□□ 0.17
CAPN3-220ENST00000569827 HLFQ16534 295 aa16.14■□□□□ 0.17
CAPN3-220ENST00000569827 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
CAPN3-220ENST00000569827 SLC51AQ86UW1 340 aa16.14■□□□□ 0.17
CAPN3-220ENST00000569827 RTF1Q92541 710 aaKnown RBP16.14■□□□□ 0.17
CAPN3-220ENST00000569827 ZNF277Q9NRM2 450 aaPredicted RBP16.14■□□□□ 0.17
CAPN3-220ENST00000569827 PDZRN3Q9UPQ7 1066 aa16.14■□□□□ 0.17
CAPN3-220ENST00000569827 NIP7Q9Y221 180 aaKnown RBP eCLIP16.14■□□□□ 0.17
CAPN3-220ENST00000569827 ADAMTSL1Q8N6G6 1762 aa16.13■□□□□ 0.17
CAPN3-220ENST00000569827 SNRPA1P09661 255 aaKnown RBP16.13■□□□□ 0.17
CAPN3-220ENST00000569827 NGEFQ8N5V2 710 aa16.13■□□□□ 0.17
CAPN3-220ENST00000569827 COL4A5P29400 1685 aa16.12■□□□□ 0.17
CAPN3-220ENST00000569827 LTBP1Q14766 1721 aa16.12■□□□□ 0.17
CAPN3-220ENST00000569827 CCDC93Q567U6 631 aa16.12■□□□□ 0.17
CAPN3-220ENST00000569827 C7orf43Q8WVR3 580 aa16.12■□□□□ 0.17
CAPN3-220ENST00000569827 ABCC12Q96J65 1359 aa16.12■□□□□ 0.17
CAPN3-220ENST00000569827 LAMB2P55268 1798 aa16.11■□□□□ 0.17
CAPN3-220ENST00000569827 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
CAPN3-220ENST00000569827 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
CAPN3-220ENST00000569827 ZNF652Q9Y2D9 606 aa16.11■□□□□ 0.17
CAPN3-220ENST00000569827 TAF1P21675 1872 aa16.11■□□□□ 0.17
CAPN3-220ENST00000569827 NPR1P16066 1061 aa16.1■□□□□ 0.17
CAPN3-220ENST00000569827 NUTM1Q86Y26 1132 aa16.1■□□□□ 0.17
CAPN3-220ENST00000569827 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
CAPN3-220ENST00000569827 CLEC4GQ6UXB4 293 aa16.09■□□□□ 0.17
CAPN3-220ENST00000569827 THUMPD2Q9BTF0 503 aaKnown RBP16.09■□□□□ 0.17
CAPN3-220ENST00000569827 TAF1DQ9H5J8 278 aaPredicted RBP16.09■□□□□ 0.17
CAPN3-220ENST00000569827 CREBZFQ9NS37 354 aa16.09■□□□□ 0.17
CAPN3-220ENST00000569827 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
CAPN3-220ENST00000569827 TRPM7Q96QT4 1865 aa16.09■□□□□ 0.17
CAPN3-220ENST00000569827 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.17
CAPN3-220ENST00000569827 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.16
CAPN3-220ENST00000569827 GPTP24298 496 aa16.07■□□□□ 0.16
CAPN3-220ENST00000569827 TPTE2Q6XPS3 522 aa16.07■□□□□ 0.16
CAPN3-220ENST00000569827 TTLL7Q6ZT98 887 aa16.07■□□□□ 0.16
CAPN3-220ENST00000569827 LDHDQ86WU2 507 aa16.07■□□□□ 0.16
CAPN3-220ENST00000569827 PASKQ96RG2 1323 aa16.07■□□□□ 0.16
CAPN3-220ENST00000569827 CNTNAP1P78357 1384 aa16.07■□□□□ 0.16
CAPN3-220ENST00000569827 SNED1Q8TER0 1413 aa16.06■□□□□ 0.16
CAPN3-220ENST00000569827 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
CAPN3-220ENST00000569827 FOXN1O15353 648 aa16.06■□□□□ 0.16
CAPN3-220ENST00000569827 GTF2E1P29083 439 aaPredicted RBP16.06■□□□□ 0.16
CAPN3-220ENST00000569827 IARSP41252 1262 aaKnown RBP16.06■□□□□ 0.16
CAPN3-220ENST00000569827 TAF7Q15545 349 aaPredicted RBP16.06■□□□□ 0.16
CAPN3-220ENST00000569827 SYNE4Q8N205 404 aa16.06■□□□□ 0.16
CAPN3-220ENST00000569827 L3MBTL3Q96JM7 780 aaPredicted RBP16.06■□□□□ 0.16
CAPN3-220ENST00000569827 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
CAPN3-220ENST00000569827 RRP7AQ9Y3A4 280 aaKnown RBP16.06■□□□□ 0.16
CAPN3-220ENST00000569827 IQCA1LA6NCM1 817 aa16.05■□□□□ 0.16
CAPN3-220ENST00000569827 TCERG1O14776 1098 aaKnown RBP16.05■□□□□ 0.16
CAPN3-220ENST00000569827 MYL6BP14649 208 aa16.05■□□□□ 0.16
CAPN3-220ENST00000569827 ZBTB3Q9H5J0 574 aa16.05■□□□□ 0.16
CAPN3-220ENST00000569827 HACL1Q9UJ83 578 aa16.05■□□□□ 0.16
CAPN3-220ENST00000569827 UBN2Q6ZU65 1347 aa16.04■□□□□ 0.16
CAPN3-220ENST00000569827 EPHX2P34913 555 aa16.04■□□□□ 0.16
CAPN3-220ENST00000569827 MAP1SQ66K74 1059 aaPredicted RBP16.04■□□□□ 0.16
CAPN3-220ENST00000569827 ITGBL1O95965 494 aaPredicted RBP16.03■□□□□ 0.16
CAPN3-220ENST00000569827 VEGFBP49765 207 aa16.03■□□□□ 0.16
CAPN3-220ENST00000569827 FMR1Q06787 632 aaKnown RBP eCLIP16.03■□□□□ 0.16
CAPN3-220ENST00000569827 C3orf67Q6ZVT6 689 aa16.03■□□□□ 0.16
CAPN3-220ENST00000569827 GJA3Q9Y6H8 435 aa16.03■□□□□ 0.16
CAPN3-220ENST00000569827 MAP3K15Q6ZN16 1313 aa16.02■□□□□ 0.16
CAPN3-220ENST00000569827 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.16
CAPN3-220ENST00000569827 RTKN2Q8IZC4 609 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms