RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
CHD9-220ENST00000569794 TBCELQ5QJ74 424 aa10.87□□□□□ -0.67
CHD9-220ENST00000569794 TNS4Q8IZW8 715 aa10.87□□□□□ -0.67
CHD9-220ENST00000569794 DEPDC4Q8N2C3 294 aa10.87□□□□□ -0.67
CHD9-220ENST00000569794 ZNF232Q9UNY5 417 aa10.87□□□□□ -0.67
CHD9-220ENST00000569794 ADARB2-AS1A8MUL3 147 aa10.86□□□□□ -0.67
CHD9-220ENST00000569794 GATA4P43694 442 aa10.85□□□□□ -0.67
CHD9-220ENST00000569794 SH3PXD2AQ5TCZ1 1133 aa10.85□□□□□ -0.67
CHD9-220ENST00000569794 SEMA6BQ9H3T3 888 aa10.85□□□□□ -0.67
CHD9-220ENST00000569794 NEUROD4Q9HD90 331 aa10.85□□□□□ -0.67
CHD9-220ENST00000569794 SERTM1A2A2V5 107 aa10.84□□□□□ -0.67
CHD9-220ENST00000569794 SPDYE3A6NKU9 549 aa10.84□□□□□ -0.67
CHD9-220ENST00000569794 SFSWAPQ12872 951 aaKnown RBP10.84□□□□□ -0.67
CHD9-220ENST00000569794 SLC30A3Q99726 388 aa10.84□□□□□ -0.67
CHD9-220ENST00000569794 TRIM50Q86XT4 487 aa10.83□□□□□ -0.68
CHD9-220ENST00000569794 COL9A3Q14050 684 aaPredicted RBP10.82□□□□□ -0.68
CHD9-220ENST00000569794 WWC1Q8IX03 1113 aa10.82□□□□□ -0.68
CHD9-220ENST00000569794 RHPN1Q8TCX5 695 aa10.82□□□□□ -0.68
CHD9-220ENST00000569794 TNFRSF25Q93038 417 aa10.82□□□□□ -0.68
CHD9-220ENST00000569794 POM121Q96HA1 1249 aa10.82□□□□□ -0.68
CHD9-220ENST00000569794 STARD13Q9Y3M8 1113 aa10.82□□□□□ -0.68
CHD9-220ENST00000569794 M0R082 166 aa10.81□□□□□ -0.68
CHD9-220ENST00000569794 ZBTB7BO15156 539 aaPredicted RBP10.81□□□□□ -0.68
CHD9-220ENST00000569794 PRRT3Q5FWE3 981 aa10.81□□□□□ -0.68
CHD9-220ENST00000569794 TPCN2Q8NHX9 752 aa10.81□□□□□ -0.68
CHD9-220ENST00000569794 ZNF417Q8TAU3 575 aa10.81□□□□□ -0.68
CHD9-220ENST00000569794 ZNF587Q96SQ5 575 aaPredicted RBP10.81□□□□□ -0.68
CHD9-220ENST00000569794 PRDM6Q9NQX0 595 aa10.81□□□□□ -0.68
CHD9-220ENST00000569794 KIAA1024Q9UPX6 916 aa10.81□□□□□ -0.68
CHD9-220ENST00000569794 SPEM2Q0P670 501 aa10.8□□□□□ -0.68
CHD9-220ENST00000569794 C1orf53Q5VUE5 145 aa10.8□□□□□ -0.68
CHD9-220ENST00000569794 HIRAP54198 1017 aaPredicted RBP10.79□□□□□ -0.68
CHD9-220ENST00000569794 PSMA6P60900 246 aaKnown RBP10.79□□□□□ -0.68
CHD9-220ENST00000569794 POTEAQ6S8J7 498 aa10.79□□□□□ -0.68
CHD9-220ENST00000569794 PLEKHM2Q8IWE5 1019 aa10.79□□□□□ -0.68
CHD9-220ENST00000569794 TSPAN10Q9H1Z9 355 aaPredicted RBP10.79□□□□□ -0.68
CHD9-220ENST00000569794 ALBP02768 609 aa10.78□□□□□ -0.68
CHD9-220ENST00000569794 ATP1A2P50993 1020 aa10.78□□□□□ -0.68
CHD9-220ENST00000569794 CLDN10P78369 228 aa10.78□□□□□ -0.68
CHD9-220ENST00000569794 CCDC102BQ68D86 513 aa10.78□□□□□ -0.68
CHD9-220ENST00000569794 MICALL1Q8N3F8 863 aa10.78□□□□□ -0.68
CHD9-220ENST00000569794 USP17L3A6NCW0 530 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 USP17L4A6NCW7 530 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 FAM229AH3BQW9 127 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 APBA3O96018 575 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 ADH7P40394 386 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 NEUROD1Q13562 356 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 RSPO4Q2I0M5 234 aaPredicted RBP10.77□□□□□ -0.69
CHD9-220ENST00000569794 USP17L2Q6R6M4 530 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 C8orf86Q6ZUL3 223 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 USP17L1Q7RTZ2 530 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 RAB44Q7Z6P3 723 aaPredicted RBP10.77□□□□□ -0.69
CHD9-220ENST00000569794 ADAMTS19Q8TE59 1207 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 CEP63Q96MT8 703 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 BRD7Q9NPI1 651 aa10.77□□□□□ -0.69
CHD9-220ENST00000569794 POM121CA8CG34 1229 aa10.76□□□□□ -0.69
CHD9-220ENST00000569794 KCNQ4P56696 695 aa10.76□□□□□ -0.69
CHD9-220ENST00000569794 NKAPLQ5M9Q1 402 aa10.76□□□□□ -0.69
CHD9-220ENST00000569794 HSH2DQ96JZ2 352 aa10.76□□□□□ -0.69
CHD9-220ENST00000569794 PHACTR1Q9C0D0 580 aa10.76□□□□□ -0.69
CHD9-220ENST00000569794 ANKIB1Q9P2G1 1089 aa10.76□□□□□ -0.69
CHD9-220ENST00000569794 HCN4Q9Y3Q4 1203 aa10.76□□□□□ -0.69
CHD9-220ENST00000569794 NID1P14543 1247 aa10.75□□□□□ -0.69
CHD9-220ENST00000569794 UCN2Q96RP3 112 aa10.75□□□□□ -0.69
CHD9-220ENST00000569794 KRTAP4-8Q9BYQ9 185 aa10.75□□□□□ -0.69
CHD9-220ENST00000569794 TPSG1Q9NRR2 321 aa10.75□□□□□ -0.69
CHD9-220ENST00000569794 M0R2N6 131 aa10.74□□□□□ -0.69
CHD9-220ENST00000569794 RAD21O60216 631 aa10.74□□□□□ -0.69
CHD9-220ENST00000569794 TYRO3Q06418 890 aa10.74□□□□□ -0.69
CHD9-220ENST00000569794 ZMYM1Q5SVZ6 1142 aa10.74□□□□□ -0.69
CHD9-220ENST00000569794 ZNF280CQ8ND82 737 aa10.74□□□□□ -0.69
CHD9-220ENST00000569794 CHMP3Q9Y3E7 222 aa10.74□□□□□ -0.69
CHD9-220ENST00000569794 SFI1A8K8P3 1242 aa10.73□□□□□ -0.69
CHD9-220ENST00000569794 TRIM28Q13263 835 aaKnown RBP10.73□□□□□ -0.69
CHD9-220ENST00000569794 C20orf204Q6ZNR8 217 aa10.73□□□□□ -0.69
CHD9-220ENST00000569794 LARGE2Q8N3Y3 721 aa10.73□□□□□ -0.69
CHD9-220ENST00000569794 SUSD3Q96L08 255 aa10.73□□□□□ -0.69
CHD9-220ENST00000569794 KCNH4Q9UQ05 1017 aa10.73□□□□□ -0.69
CHD9-220ENST00000569794 PALM3A6NDB9 673 aaPredicted RBP10.72□□□□□ -0.69
CHD9-220ENST00000569794 OGFOD1Q8N543 542 aa10.72□□□□□ -0.69
CHD9-220ENST00000569794 NACC1Q96RE7 527 aa10.72□□□□□ -0.69
CHD9-220ENST00000569794 ATP9BO43861 1147 aa10.71□□□□□ -0.69
CHD9-220ENST00000569794 HDGFL1Q5TGJ6 251 aa10.71□□□□□ -0.69
CHD9-220ENST00000569794 SIX5Q8N196 739 aa10.71□□□□□ -0.69
CHD9-220ENST00000569794 TSEN2Q8NCE0 465 aaKnown RBP10.71□□□□□ -0.69
CHD9-220ENST00000569794 GRIK4Q16099 956 aa10.7□□□□□ -0.7
CHD9-220ENST00000569794 MKRN1Q9UHC7 482 aaKnown RBP10.7□□□□□ -0.7
CHD9-220ENST00000569794 DYRK3O43781 588 aa10.69□□□□□ -0.7
CHD9-220ENST00000569794 C21orf2O43822 256 aa10.69□□□□□ -0.7
CHD9-220ENST00000569794 PPP1R12BO60237 982 aaPredicted RBP10.69□□□□□ -0.7
CHD9-220ENST00000569794 DKK1O94907 266 aa10.69□□□□□ -0.7
CHD9-220ENST00000569794 FOXD4L6Q3SYB3 417 aaPredicted RBP10.68□□□□□ -0.7
CHD9-220ENST00000569794 FOXD4L3Q6VB84 417 aaPredicted RBP10.68□□□□□ -0.7
CHD9-220ENST00000569794 BHMTQ93088 406 aa10.68□□□□□ -0.7
CHD9-220ENST00000569794 LILRB5O75023 590 aa10.67□□□□□ -0.7
CHD9-220ENST00000569794 UBTFP17480 764 aaKnown RBP10.67□□□□□ -0.7
CHD9-220ENST00000569794 ALDH16A1Q8IZ83 802 aa10.67□□□□□ -0.7
CHD9-220ENST00000569794 STAG2Q8N3U4 1231 aa10.67□□□□□ -0.7
CHD9-220ENST00000569794 ZNF594Q96JF6 807 aaPredicted RBP10.67□□□□□ -0.7
CHD9-220ENST00000569794 TRAPPC3LQ5T215 181 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms