RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 CFAP70Q5T0N1 1121 aa9.04□□□□□ -0.96
LINC00556-201ENST00000569603 BAP1Q92560 729 aa9.04□□□□□ -0.96
LINC00556-201ENST00000569603 GLI3P10071 1580 aa9.03□□□□□ -0.96
LINC00556-201ENST00000569603 XPCQ01831 940 aaPredicted RBP9.03□□□□□ -0.96
LINC00556-201ENST00000569603 KCNH2Q12809 1159 aa9.03□□□□□ -0.96
LINC00556-201ENST00000569603 MTMR2Q13614 643 aa9.03□□□□□ -0.96
LINC00556-201ENST00000569603 ZC3H15Q8WU90 426 aaKnown RBP9.03□□□□□ -0.96
LINC00556-201ENST00000569603 NGLY1Q96IV0 654 aa9.03□□□□□ -0.96
LINC00556-201ENST00000569603 BEGAINQ9BUH8 593 aa9.03□□□□□ -0.96
LINC00556-201ENST00000569603 ANKARQ7Z5J8 1434 aa9.03□□□□□ -0.96
LINC00556-201ENST00000569603 CRYBG1Q9Y4K1 1723 aa9.02□□□□□ -0.96
LINC00556-201ENST00000569603 DHX57Q6P158 1386 aaKnown RBP9.02□□□□□ -0.97
LINC00556-201ENST00000569603 ALS2Q96Q42 1657 aa9.02□□□□□ -0.97
LINC00556-201ENST00000569603 HRCP23327 699 aa9.02□□□□□ -0.97
LINC00556-201ENST00000569603 ZNF511Q8NB15 262 aa9.02□□□□□ -0.97
LINC00556-201ENST00000569603 USP21Q9UK80 565 aa9.02□□□□□ -0.97
LINC00556-201ENST00000569603 TRPC5Q9UL62 973 aaPredicted RBP9.02□□□□□ -0.97
LINC00556-201ENST00000569603 TNS3Q68CZ2 1445 aa9.02□□□□□ -0.97
LINC00556-201ENST00000569603 SBNO1A3KN83 1393 aa9.01□□□□□ -0.97
LINC00556-201ENST00000569603 PARP9Q8IXQ6 854 aa9.01□□□□□ -0.97
LINC00556-201ENST00000569603 ARHGEF28Q8N1W1 1705 aaKnown RBP9.01□□□□□ -0.97
LINC00556-201ENST00000569603 TBC1D2Q9BYX2 928 aa9.01□□□□□ -0.97
LINC00556-201ENST00000569603 NWD2Q9ULI1 1742 aa9.01□□□□□ -0.97
LINC00556-201ENST00000569603 PRR36Q9H6K5 1346 aa9.01□□□□□ -0.97
LINC00556-201ENST00000569603 BRWD3Q6RI45 1802 aa9.01□□□□□ -0.97
LINC00556-201ENST00000569603 PLCH1Q4KWH8 1693 aa9□□□□□ -0.97
LINC00556-201ENST00000569603 DESI1Q6ICB0 168 aa9□□□□□ -0.97
LINC00556-201ENST00000569603 RSBN1LQ6PCB5 846 aaPredicted RBP9□□□□□ -0.97
LINC00556-201ENST00000569603 PRAM1Q96QH2 718 aa9□□□□□ -0.97
LINC00556-201ENST00000569603 RALGAPBQ86X10 1494 aa9□□□□□ -0.97
LINC00556-201ENST00000569603 NRAPQ86VF7 1730 aa9□□□□□ -0.97
LINC00556-201ENST00000569603 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
LINC00556-201ENST00000569603 KRT28Q7Z3Y7 464 aa8.99□□□□□ -0.97
LINC00556-201ENST00000569603 PCDHB15Q9Y5E8 787 aa8.99□□□□□ -0.97
LINC00556-201ENST00000569603 TULP4Q9NRJ4 1543 aa8.99□□□□□ -0.97
LINC00556-201ENST00000569603 KIAA1210Q9ULL0 1709 aa8.98□□□□□ -0.97
LINC00556-201ENST00000569603 FAM181BA6NEQ2 426 aa8.98□□□□□ -0.97
LINC00556-201ENST00000569603 SPDYE5A6NIY4 337 aa8.98□□□□□ -0.97
LINC00556-201ENST00000569603 CFAP99D6REC4 459 aa8.98□□□□□ -0.97
LINC00556-201ENST00000569603 NNTQ13423 1086 aa8.98□□□□□ -0.97
LINC00556-201ENST00000569603 GJD4Q96KN9 370 aaPredicted RBP8.98□□□□□ -0.97
LINC00556-201ENST00000569603 ATP7BP35670 1465 aa8.97□□□□□ -0.97
LINC00556-201ENST00000569603 VARSP26640 1264 aaKnown RBP8.97□□□□□ -0.97
LINC00556-201ENST00000569603 LYPD8Q6UX82 237 aa8.97□□□□□ -0.97
LINC00556-201ENST00000569603 UNC5CLQ8IV45 518 aa8.97□□□□□ -0.97
LINC00556-201ENST00000569603 ZFP42Q96MM3 310 aa8.97□□□□□ -0.97
LINC00556-201ENST00000569603 MAP10Q9P2G4 905 aa8.97□□□□□ -0.97
LINC00556-201ENST00000569603 NXF1Q9UBU9 619 aaKnown RBP8.97□□□□□ -0.97
LINC00556-201ENST00000569603 TOPAZ1Q8N9V7 1692 aa8.97□□□□□ -0.97
LINC00556-201ENST00000569603 ARHGEF10O15013 1369 aa8.97□□□□□ -0.97
LINC00556-201ENST00000569603 CTHP32929 405 aa8.96□□□□□ -0.98
LINC00556-201ENST00000569603 GJA5P36382 358 aa8.96□□□□□ -0.98
LINC00556-201ENST00000569603 VEGFBP49765 207 aa8.96□□□□□ -0.98
LINC00556-201ENST00000569603 CABLES1Q8TDN4 633 aa8.96□□□□□ -0.98
LINC00556-201ENST00000569603 TRIM66O15016 1216 aa8.95□□□□□ -0.98
LINC00556-201ENST00000569603 SPTLC1O15269 473 aa8.95□□□□□ -0.98
LINC00556-201ENST00000569603 F12P00748 615 aaPredicted RBP8.95□□□□□ -0.98
LINC00556-201ENST00000569603 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
LINC00556-201ENST00000569603 SAFB2Q14151 953 aaKnown RBP eCLIP8.95□□□□□ -0.98
LINC00556-201ENST00000569603 VPS72Q15906 364 aa8.95□□□□□ -0.98
LINC00556-201ENST00000569603 ITSN1Q15811 1721 aa8.94□□□□□ -0.98
LINC00556-201ENST00000569603 FAM83GA6ND36 823 aa8.94□□□□□ -0.98
LINC00556-201ENST00000569603 WASLO00401 505 aaPredicted RBP8.94□□□□□ -0.98
LINC00556-201ENST00000569603 TIMP2P16035 220 aa8.94□□□□□ -0.98
LINC00556-201ENST00000569603 MPNDQ8N594 471 aa8.94□□□□□ -0.98
LINC00556-201ENST00000569603 DCAF11Q8TEB1 546 aa8.94□□□□□ -0.98
LINC00556-201ENST00000569603 FOXJ1Q92949 421 aa8.94□□□□□ -0.98
LINC00556-201ENST00000569603 TRAK1Q9UPV9 953 aa8.94□□□□□ -0.98
LINC00556-201ENST00000569603 EIF3AQ14152 1382 aaKnown RBP8.94□□□□□ -0.98
LINC00556-201ENST00000569603 THSD7AQ9UPZ6 1657 aa8.94□□□□□ -0.98
LINC00556-201ENST00000569603 COL14A1Q05707 1796 aaKnown RBP8.94□□□□□ -0.98
LINC00556-201ENST00000569603 PLEKHG3A1L390 1219 aa8.93□□□□□ -0.98
LINC00556-201ENST00000569603 GMPRP36959 345 aa8.93□□□□□ -0.98
LINC00556-201ENST00000569603 PSME1Q06323 249 aa8.93□□□□□ -0.98
LINC00556-201ENST00000569603 PMFBP1Q8TBY8 1022 aa8.93□□□□□ -0.98
LINC00556-201ENST00000569603 SLC16A10Q8TF71 515 aa8.93□□□□□ -0.98
LINC00556-201ENST00000569603 HIRIP3Q9BW71 556 aaPredicted RBP8.93□□□□□ -0.98
LINC00556-201ENST00000569603 ZBTB3Q9H5J0 574 aa8.93□□□□□ -0.98
LINC00556-201ENST00000569603 POLR3AO14802 1390 aaPredicted RBP8.93□□□□□ -0.98
LINC00556-201ENST00000569603 PHRF1Q9P1Y6 1649 aaKnown RBP8.92□□□□□ -0.98
LINC00556-201ENST00000569603 BLMP54132 1417 aaPredicted RBP8.92□□□□□ -0.98
LINC00556-201ENST00000569603 ERBB4Q15303 1308 aa8.92□□□□□ -0.98
LINC00556-201ENST00000569603 H3BM21 787 aa8.92□□□□□ -0.98
LINC00556-201ENST00000569603 PER1O15534 1290 aaPredicted RBP8.92□□□□□ -0.98
LINC00556-201ENST00000569603 ADH1CP00326 375 aa8.92□□□□□ -0.98
LINC00556-201ENST00000569603 LORP23490 312 aaPredicted RBP8.92□□□□□ -0.98
LINC00556-201ENST00000569603 WDR4P57081 412 aaKnown RBP8.92□□□□□ -0.98
LINC00556-201ENST00000569603 CSPP1Q1MSJ5 1256 aa8.92□□□□□ -0.98
LINC00556-201ENST00000569603 MRPL14Q6P1L8 145 aaKnown RBP8.92□□□□□ -0.98
LINC00556-201ENST00000569603 CCDC125Q86Z20 511 aa8.92□□□□□ -0.98
LINC00556-201ENST00000569603 KLF16Q9BXK1 252 aaPredicted RBP8.92□□□□□ -0.98
LINC00556-201ENST00000569603 POGKQ9P215 609 aa8.92□□□□□ -0.98
LINC00556-201ENST00000569603 DIXDC1Q155Q3 683 aa8.91□□□□□ -0.98
LINC00556-201ENST00000569603 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
LINC00556-201ENST00000569603 RIC3Q7Z5B4 369 aa8.91□□□□□ -0.98
LINC00556-201ENST00000569603 SOBPA7XYQ1 873 aa8.9□□□□□ -0.98
LINC00556-201ENST00000569603 SEPT12Q8IYM1 358 aa8.9□□□□□ -0.98
LINC00556-201ENST00000569603 FAM174AQ8TBP5 190 aa8.9□□□□□ -0.98
LINC00556-201ENST00000569603 PURBQ96QR8 312 aaKnown RBP8.9□□□□□ -0.98
LINC00556-201ENST00000569603 LIMD1Q9UGP4 676 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms