RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 LSG1Q9H089 658 aaKnown RBP9.65□□□□□ -0.86
SPG7-220ENST00000569363 HYPKQ9NX55 129 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 TMEM63CQ9P1W3 806 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 CHPF2Q9P2E5 772 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 NOL7Q9UMY1 257 aaKnown RBP9.65□□□□□ -0.86
SPG7-220ENST00000569363 SNX14Q9Y5W7 946 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 CHD2O14647 1828 aaKnown RBP9.65□□□□□ -0.86
SPG7-220ENST00000569363 PI4KAP2A4QPH2 592 aa9.64□□□□□ -0.87
SPG7-220ENST00000569363 RNMTO43148 476 aaKnown RBP9.64□□□□□ -0.87
SPG7-220ENST00000569363 ZNF500O60304 480 aaPredicted RBP9.64□□□□□ -0.87
SPG7-220ENST00000569363 NBPF6Q5VWK0 638 aa9.64□□□□□ -0.87
SPG7-220ENST00000569363 KSR2Q6VAB6 950 aa9.64□□□□□ -0.87
SPG7-220ENST00000569363 PI4KAP1Q8N8J0 262 aa9.64□□□□□ -0.87
SPG7-220ENST00000569363 NBPF4Q96M43 638 aa9.64□□□□□ -0.87
SPG7-220ENST00000569363 SH2B1Q9NRF2 756 aaPredicted RBP9.64□□□□□ -0.87
SPG7-220ENST00000569363 ECHDC1Q9NTX5 307 aa9.64□□□□□ -0.87
SPG7-220ENST00000569363 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
SPG7-220ENST00000569363 SLIT3O75094 1523 aa9.64□□□□□ -0.87
SPG7-220ENST00000569363 ADCY9O60503 1353 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 PLEKHG2Q9H7P9 1386 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 XIRP1Q702N8 1843 aaKnown RBP9.63□□□□□ -0.87
SPG7-220ENST00000569363 AK9Q5TCS8 1911 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 SYCE3A1L190 88 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 RRP9O43818 475 aaKnown RBP9.63□□□□□ -0.87
SPG7-220ENST00000569363 IFIT2P09913 472 aaKnown RBP9.63□□□□□ -0.87
SPG7-220ENST00000569363 ZSCAN22P10073 491 aaPredicted RBP9.63□□□□□ -0.87
SPG7-220ENST00000569363 VPS53Q5VIR6 699 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 USHBP1Q8N6Y0 703 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 KCNB2Q92953 911 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 EVI5LQ96CN4 794 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 TTC14Q96N46 770 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 UPF3BQ9BZI7 483 aaKnown RBP9.63□□□□□ -0.87
SPG7-220ENST00000569363 LGR6Q9HBX8 967 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 C9orf78Q9NZ63 289 aaPredicted RBP9.63□□□□□ -0.87
SPG7-220ENST00000569363 SMC3Q9UQE7 1217 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 HEG1Q9ULI3 1381 aa9.63□□□□□ -0.87
SPG7-220ENST00000569363 UTYO14607 1347 aa9.62□□□□□ -0.87
SPG7-220ENST00000569363 CAMTA1Q9Y6Y1 1673 aa9.62□□□□□ -0.87
SPG7-220ENST00000569363 NBPF7P0C2Y1 421 aaPredicted RBP9.62□□□□□ -0.87
SPG7-220ENST00000569363 ZKSCAN1P17029 563 aaPredicted RBP9.62□□□□□ -0.87
SPG7-220ENST00000569363 CCDC183Q5T5S1 534 aa9.62□□□□□ -0.87
SPG7-220ENST00000569363 LINS1Q8NG48 757 aa9.62□□□□□ -0.87
SPG7-220ENST00000569363 RPAP1Q9BWH6 1393 aaPredicted RBP9.62□□□□□ -0.87
SPG7-220ENST00000569363 STX6O43752 255 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
SPG7-220ENST00000569363 PSMA5P28066 241 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 AK2P54819 239 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 UBE2HP62256 183 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 G3BP1Q13283 466 aaKnown RBP eCLIP9.61□□□□□ -0.87
SPG7-220ENST00000569363 GLIPR1L2Q4G1C9 344 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 FOXD4L5Q5VV16 416 aaPredicted RBP9.61□□□□□ -0.87
SPG7-220ENST00000569363 NOL8Q76FK4 1167 aaKnown RBP9.61□□□□□ -0.87
SPG7-220ENST00000569363 USP48Q86UV5 1035 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 ARHGEF25Q86VW2 580 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 FOXD4L4Q8WXT5 416 aaPredicted RBP9.61□□□□□ -0.87
SPG7-220ENST00000569363 ZSWIM6Q9HCJ5 1215 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 PDRG1Q9NUG6 133 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 ZKSCAN5Q9Y2L8 839 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 MAP3K2Q9Y2U5 619 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 CYP46A1Q9Y6A2 500 aa9.61□□□□□ -0.87
SPG7-220ENST00000569363 F13A1P00488 732 aa9.6□□□□□ -0.87
SPG7-220ENST00000569363 ANKRD1Q15327 319 aa9.6□□□□□ -0.87
SPG7-220ENST00000569363 ESCO1Q5FWF5 840 aa9.6□□□□□ -0.87
SPG7-220ENST00000569363 RNF20Q5VTR2 975 aa9.6□□□□□ -0.87
SPG7-220ENST00000569363 LARP1Q6PKG0 1096 aaKnown RBP9.6□□□□□ -0.87
SPG7-220ENST00000569363 CWC27Q6UX04 472 aaKnown RBP9.6□□□□□ -0.87
SPG7-220ENST00000569363 ALDH8A1Q9H2A2 487 aaPredicted RBP9.6□□□□□ -0.87
SPG7-220ENST00000569363 DDX21Q9NR30 783 aaKnown RBP eCLIP9.6□□□□□ -0.87
SPG7-220ENST00000569363 SNRKQ9NRH2 765 aa9.6□□□□□ -0.87
SPG7-220ENST00000569363 ADAMTS7Q9UKP4 1686 aa9.6□□□□□ -0.87
SPG7-220ENST00000569363 ABCC6O95255 1503 aa9.6□□□□□ -0.87
SPG7-220ENST00000569363 MST1RQ04912 1400 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 GRM8O00222 908 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 CAPN15O75808 1086 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 MAP4K4O95819 1239 aaPredicted RBP9.59□□□□□ -0.87
SPG7-220ENST00000569363 CASTP20810 708 aaKnown RBP9.59□□□□□ -0.87
SPG7-220ENST00000569363 PDCP20941 246 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 SYT1P21579 422 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 NEXNQ0ZGT2 675 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 MPRIPQ6WCQ1 1025 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 RUFY3Q7L099 469 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 RASEFQ8IZ41 740 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 ANKRD24Q8TF21 1146 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 IL25Q9H293 177 aa9.59□□□□□ -0.87
SPG7-220ENST00000569363 NSFL1CQ9UNZ2 370 aaKnown RBP9.59□□□□□ -0.87
SPG7-220ENST00000569363 CCDC171Q6TFL3 1326 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 KIF1AQ12756 1690 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 ZBTB7CA1YPR0 619 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 KCNQ3O43525 872 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 GCP02774 474 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 PTMAP06454 111 aaKnown RBP9.58□□□□□ -0.88
SPG7-220ENST00000569363 KCNJ4P48050 445 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 HSP90AA2PQ14568 343 aaPredicted RBP9.58□□□□□ -0.88
SPG7-220ENST00000569363 NECTIN1Q15223 517 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 AACSQ86V21 672 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 UBE2Q2Q8WVN8 375 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 JAKMIP1Q96N16 626 aaKnown RBP9.58□□□□□ -0.88
SPG7-220ENST00000569363 HMG20BQ9P0W2 317 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 SPG7Q9UQ90 795 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 RFX7Q2KHR2 1363 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms