RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 TPRNQ4KMQ1 711 aa8.54□□□□□ -1.04
CDH13-212ENST00000569144 TMEM134Q9H6X4 195 aa8.54□□□□□ -1.04
CDH13-212ENST00000569144 CD2APQ9Y5K6 639 aa8.54□□□□□ -1.04
CDH13-212ENST00000569144 TTC21BQ7Z4L5 1316 aa8.54□□□□□ -1.04
CDH13-212ENST00000569144 CENPJQ9HC77 1338 aaPredicted RBP8.54□□□□□ -1.04
CDH13-212ENST00000569144 RGPD5Q99666 1765 aa8.53□□□□□ -1.04
CDH13-212ENST00000569144 TUBGCP6Q96RT7 1819 aa8.53□□□□□ -1.04
CDH13-212ENST00000569144 PTPN5P54829 565 aa8.53□□□□□ -1.04
CDH13-212ENST00000569144 SLC24A3Q9HC58 644 aa8.53□□□□□ -1.04
CDH13-212ENST00000569144 TTC21AQ8NDW8 1320 aa8.53□□□□□ -1.04
CDH13-212ENST00000569144 COL13A1Q5TAT6 717 aaPredicted RBP8.52□□□□□ -1.05
CDH13-212ENST00000569144 COL23A1Q86Y22 540 aaPredicted RBP8.52□□□□□ -1.05
CDH13-212ENST00000569144 NLRP2Q9NX02 1062 aa8.52□□□□□ -1.05
CDH13-212ENST00000569144 KIAA1210Q9ULL0 1709 aa8.51□□□□□ -1.05
CDH13-212ENST00000569144 TOMM70O94826 608 aa8.51□□□□□ -1.05
CDH13-212ENST00000569144 PRELPP51888 382 aa8.51□□□□□ -1.05
CDH13-212ENST00000569144 KCNQ4P56696 695 aa8.51□□□□□ -1.05
CDH13-212ENST00000569144 MSL1Q68DK7 614 aa8.51□□□□□ -1.05
CDH13-212ENST00000569144 SLF2Q8IX21 1173 aa8.51□□□□□ -1.05
CDH13-212ENST00000569144 AK7Q96M32 723 aa8.51□□□□□ -1.05
CDH13-212ENST00000569144 HPS5Q9UPZ3 1129 aa8.51□□□□□ -1.05
CDH13-212ENST00000569144 ANKRD36BQ8N2N9 1353 aa8.5□□□□□ -1.05
CDH13-212ENST00000569144 LY75O60449 1722 aa8.5□□□□□ -1.05
CDH13-212ENST00000569144 SLC4A3P48751 1232 aa8.5□□□□□ -1.05
CDH13-212ENST00000569144 HCSTQ9UBK5 93 aa8.5□□□□□ -1.05
CDH13-212ENST00000569144 TSR3Q9UJK0 312 aaKnown RBP8.5□□□□□ -1.05
CDH13-212ENST00000569144 CCNL1Q9UK58 526 aaPredicted RBP8.5□□□□□ -1.05
CDH13-212ENST00000569144 NSD2O96028 1365 aa8.49□□□□□ -1.05
CDH13-212ENST00000569144 MDM2Q00987 491 aaPredicted RBP8.49□□□□□ -1.05
CDH13-212ENST00000569144 NBPF1Q3BBV0 1214 aa8.49□□□□□ -1.05
CDH13-212ENST00000569144 TNS4Q8IZW8 715 aa8.49□□□□□ -1.05
CDH13-212ENST00000569144 JMYQ8N9B5 988 aa8.49□□□□□ -1.05
CDH13-212ENST00000569144 DDX54Q8TDD1 881 aaKnown RBP8.49□□□□□ -1.05
CDH13-212ENST00000569144 ANKRD24Q8TF21 1146 aa8.49□□□□□ -1.05
CDH13-212ENST00000569144 SYTL4Q96C24 671 aaPredicted RBP8.49□□□□□ -1.05
CDH13-212ENST00000569144 WBP1LQ9NX94 342 aa8.49□□□□□ -1.05
CDH13-212ENST00000569144 DAXXQ9UER7 740 aaPredicted RBP8.49□□□□□ -1.05
CDH13-212ENST00000569144 IGSF1Q8N6C5 1336 aa8.49□□□□□ -1.05
CDH13-212ENST00000569144 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
CDH13-212ENST00000569144 RAB3GAP2Q9H2M9 1393 aa8.48□□□□□ -1.05
CDH13-212ENST00000569144 CICQ96RK0 1608 aaPredicted RBP8.48□□□□□ -1.05
CDH13-212ENST00000569144 TRIM66O15016 1216 aa8.48□□□□□ -1.05
CDH13-212ENST00000569144 PPP4CP60510 307 aa8.48□□□□□ -1.05
CDH13-212ENST00000569144 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
CDH13-212ENST00000569144 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
CDH13-212ENST00000569144 EVC2Q86UK5 1308 aa8.48□□□□□ -1.05
CDH13-212ENST00000569144 WDR90Q96KV7 1748 aa8.47□□□□□ -1.05
CDH13-212ENST00000569144 HMGB2P26583 209 aaKnown RBP8.47□□□□□ -1.05
CDH13-212ENST00000569144 KTN1Q86UP2 1357 aaKnown RBP8.47□□□□□ -1.05
CDH13-212ENST00000569144 USP47Q96K76 1375 aa8.47□□□□□ -1.05
CDH13-212ENST00000569144 USP54Q70EL1 1684 aa8.46□□□□□ -1.05
CDH13-212ENST00000569144 DOT1LQ8TEK3 1739 aa8.46□□□□□ -1.05
CDH13-212ENST00000569144 DDX11L8A8MPP1 907 aa8.46□□□□□ -1.06
CDH13-212ENST00000569144 AMHR2Q16671 573 aa8.46□□□□□ -1.06
CDH13-212ENST00000569144 PRKCSHP14314 528 aaPredicted RBP8.45□□□□□ -1.06
CDH13-212ENST00000569144 CLCN1P35523 988 aa8.45□□□□□ -1.06
CDH13-212ENST00000569144 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
CDH13-212ENST00000569144 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
CDH13-212ENST00000569144 GPCPD1Q9NPB8 672 aa8.45□□□□□ -1.06
CDH13-212ENST00000569144 WWC3Q9ULE0 1092 aa8.45□□□□□ -1.06
CDH13-212ENST00000569144 SLC10A3P09131 477 aa8.44□□□□□ -1.06
CDH13-212ENST00000569144 FSTL1Q12841 308 aa8.44□□□□□ -1.06
CDH13-212ENST00000569144 RDH13Q8NBN7 331 aa8.44□□□□□ -1.06
CDH13-212ENST00000569144 NMRK2Q9NPI5 230 aa8.44□□□□□ -1.06
CDH13-212ENST00000569144 C5P01031 1676 aa8.43□□□□□ -1.06
CDH13-212ENST00000569144 FAM208AQ9UK61 1670 aaKnown RBP8.43□□□□□ -1.06
CDH13-212ENST00000569144 LTN1O94822 1766 aa8.43□□□□□ -1.06
CDH13-212ENST00000569144 HTRA3P83110 453 aa8.43□□□□□ -1.06
CDH13-212ENST00000569144 NME9Q86XW9 330 aa8.43□□□□□ -1.06
CDH13-212ENST00000569144 SULF1Q8IWU6 871 aa8.43□□□□□ -1.06
CDH13-212ENST00000569144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDH13-212ENST00000569144 ZCRB1Q8TBF4 217 aaKnown RBP8.43□□□□□ -1.06
CDH13-212ENST00000569144 IP6K1Q92551 441 aa8.43□□□□□ -1.06
CDH13-212ENST00000569144 TMUB1Q9BVT8 246 aa8.43□□□□□ -1.06
CDH13-212ENST00000569144 REPIN1Q9BWE0 567 aaKnown RBP8.43□□□□□ -1.06
CDH13-212ENST00000569144 MON2Q7Z3U7 1717 aa8.43□□□□□ -1.06
CDH13-212ENST00000569144 PDE4DQ08499 809 aa8.42□□□□□ -1.06
CDH13-212ENST00000569144 NYAP1Q6ZVC0 841 aa8.42□□□□□ -1.06
CDH13-212ENST00000569144 C16orf71Q8IYS4 520 aaPredicted RBP8.42□□□□□ -1.06
CDH13-212ENST00000569144 SBNO2Q9Y2G9 1366 aa8.42□□□□□ -1.06
CDH13-212ENST00000569144 NSD3Q9BZ95 1437 aa8.42□□□□□ -1.06
CDH13-212ENST00000569144 KAT6BQ8WYB5 2073 aa8.41□□□□□ -1.06
CDH13-212ENST00000569144 MEGF6O75095 1541 aa8.41□□□□□ -1.06
CDH13-212ENST00000569144 PXDNLA1KZ92 1463 aa8.41□□□□□ -1.06
CDH13-212ENST00000569144 PALLDQ8WX93 1383 aa8.41□□□□□ -1.06
CDH13-212ENST00000569144 PLEKHG2Q9H7P9 1386 aa8.41□□□□□ -1.06
CDH13-212ENST00000569144 CFHP08603 1231 aa8.41□□□□□ -1.06
CDH13-212ENST00000569144 PARP9Q8IXQ6 854 aa8.41□□□□□ -1.06
CDH13-212ENST00000569144 C4BP0C0L5 1744 aa8.4□□□□□ -1.06
CDH13-212ENST00000569144 C10orf71Q711Q0 1435 aa8.4□□□□□ -1.06
CDH13-212ENST00000569144 SSFA2P28290 1259 aa8.4□□□□□ -1.06
CDH13-212ENST00000569144 GIGYF2Q6Y7W6 1299 aaKnown RBP8.4□□□□□ -1.06
CDH13-212ENST00000569144 AMIGO3Q86WK7 504 aa8.4□□□□□ -1.06
CDH13-212ENST00000569144 LTV1Q96GA3 475 aaPredicted RBP8.4□□□□□ -1.06
CDH13-212ENST00000569144 FAM217BQ9NTX9 383 aaPredicted RBP8.4□□□□□ -1.06
CDH13-212ENST00000569144 TOGARAM1Q9Y4F4 1720 aa8.4□□□□□ -1.07
CDH13-212ENST00000569144 CD163L1Q9NR16 1453 aa8.39□□□□□ -1.07
CDH13-212ENST00000569144 EDC4Q6P2E9 1401 aaKnown RBP8.39□□□□□ -1.07
CDH13-212ENST00000569144 CGNL1Q0VF96 1302 aa8.39□□□□□ -1.07
CDH13-212ENST00000569144 HSPA1AP0DMV8 641 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms