RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 TEX13AQ9BXU3 409 aaPredicted RBP19.19■□□□□ 0.66
SNX20-204ENST00000568993 COL15A1P39059 1388 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 PTCD1O75127 700 aaKnown RBP19.18■□□□□ 0.66
SNX20-204ENST00000568993 ADAMTS2O95450 1211 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 MYD88Q99836 296 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 TUBGCP6Q96RT7 1819 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 SDSP20132 328 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 PIP4K2AP48426 406 aaPredicted RBP19.18■□□□□ 0.66
SNX20-204ENST00000568993 PIP4K2BP78356 416 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 RHPN1Q8TCX5 695 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 KIF1BPQ96EK5 621 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 SUCLG2Q96I99 432 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 SLIT2O94813 1529 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 BCL9O00512 1426 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 AOX1Q06278 1338 aa19.18■□□□□ 0.66
SNX20-204ENST00000568993 MX1P20591 662 aa19.17■□□□□ 0.66
SNX20-204ENST00000568993 ATG3Q9NT62 314 aa19.17■□□□□ 0.66
SNX20-204ENST00000568993 NUP188Q5SRE5 1749 aa19.16■□□□□ 0.66
SNX20-204ENST00000568993 ASAP1Q9ULH1 1129 aa19.16■□□□□ 0.66
SNX20-204ENST00000568993 AFDNP55196 1824 aaKnown RBP19.16■□□□□ 0.66
SNX20-204ENST00000568993 A1BGP04217 495 aa19.15■□□□□ 0.66
SNX20-204ENST00000568993 BECN1Q14457 450 aa19.15■□□□□ 0.66
SNX20-204ENST00000568993 SPATA31A5Q5VU36 1347 aa19.15■□□□□ 0.66
SNX20-204ENST00000568993 SPATA31A7Q8IWB4 1347 aa19.15■□□□□ 0.66
SNX20-204ENST00000568993 BICC1Q9H694 974 aaKnown RBP19.15■□□□□ 0.66
SNX20-204ENST00000568993 ANO8Q9HCE9 1232 aaPredicted RBP19.14■□□□□ 0.65
SNX20-204ENST00000568993 UBAP1LF5GYI3 381 aa19.13■□□□□ 0.65
SNX20-204ENST00000568993 BARGINQ6ZT62 677 aa19.13■□□□□ 0.65
SNX20-204ENST00000568993 ERC1Q8IUD2 1116 aa19.13■□□□□ 0.65
SNX20-204ENST00000568993 SLC4A3P48751 1232 aa19.13■□□□□ 0.65
SNX20-204ENST00000568993 NUTM2BA6NNL0 878 aaPredicted RBP19.12■□□□□ 0.65
SNX20-204ENST00000568993 NUTM2EB1AL46 878 aaPredicted RBP19.12■□□□□ 0.65
SNX20-204ENST00000568993 CASC1Q6TDU7 716 aa19.12■□□□□ 0.65
SNX20-204ENST00000568993 TTLL7Q6ZT98 887 aa19.12■□□□□ 0.65
SNX20-204ENST00000568993 NUTM2AQ8IVF1 878 aaPredicted RBP19.12■□□□□ 0.65
SNX20-204ENST00000568993 IL1RAPL2Q9NP60 686 aa19.12■□□□□ 0.65
SNX20-204ENST00000568993 STARD3NLO95772 234 aa19.11■□□□□ 0.65
SNX20-204ENST00000568993 CASP7P55210 303 aa19.11■□□□□ 0.65
SNX20-204ENST00000568993 DDB1Q16531 1140 aa19.11■□□□□ 0.65
SNX20-204ENST00000568993 RABL6Q3YEC7 729 aaPredicted RBP19.11■□□□□ 0.65
SNX20-204ENST00000568993 USP42Q9H9J4 1324 aaKnown RBP19.11■□□□□ 0.65
SNX20-204ENST00000568993 DNAJC10Q8IXB1 793 aa19.1■□□□□ 0.65
SNX20-204ENST00000568993 JCADQ9P266 1359 aa19.1■□□□□ 0.65
SNX20-204ENST00000568993 H7C1W4 665 aa19.1■□□□□ 0.65
SNX20-204ENST00000568993 DOT1LQ8TEK3 1739 aa19.09■□□□□ 0.65
SNX20-204ENST00000568993 ATP5J2-PTCD1G3V325 749 aa19.09■□□□□ 0.65
SNX20-204ENST00000568993 EPHA10Q5JZY3 1008 aa19.09■□□□□ 0.65
SNX20-204ENST00000568993 A0A087WZG4 1122 aa19.08■□□□□ 0.65
SNX20-204ENST00000568993 CCDC191Q8NCU4 936 aa19.08■□□□□ 0.65
SNX20-204ENST00000568993 OS9Q13438 667 aaPredicted RBP19.08■□□□□ 0.64
SNX20-204ENST00000568993 TSHZ3Q63HK5 1081 aa19.08■□□□□ 0.64
SNX20-204ENST00000568993 UBE3BQ7Z3V4 1068 aa19.08■□□□□ 0.64
SNX20-204ENST00000568993 NUTM1Q86Y26 1132 aa19.08■□□□□ 0.64
SNX20-204ENST00000568993 UNC5CLQ8IV45 518 aa19.08■□□□□ 0.64
SNX20-204ENST00000568993 CLASRPQ8N2M8 674 aaKnown RBP19.08■□□□□ 0.64
SNX20-204ENST00000568993 RBM42Q9BTD8 480 aaKnown RBP19.08■□□□□ 0.64
SNX20-204ENST00000568993 TBC1D2Q9BYX2 928 aa19.08■□□□□ 0.64
SNX20-204ENST00000568993 CWC25Q9NXE8 425 aaPredicted RBP19.08■□□□□ 0.64
SNX20-204ENST00000568993 PA2G4Q9UQ80 394 aaKnown RBP19.08■□□□□ 0.64
SNX20-204ENST00000568993 KAT6BQ8WYB5 2073 aa19.08■□□□□ 0.64
SNX20-204ENST00000568993 TTC41PQ6P2S7 1318 aa19.07■□□□□ 0.64
SNX20-204ENST00000568993 PRIM1P49642 420 aaKnown RBP19.07■□□□□ 0.64
SNX20-204ENST00000568993 PI4K2BQ8TCG2 481 aa19.07■□□□□ 0.64
SNX20-204ENST00000568993 SLC4A9Q96Q91 983 aa19.07■□□□□ 0.64
SNX20-204ENST00000568993 TRIM28Q13263 835 aaKnown RBP19.07■□□□□ 0.64
SNX20-204ENST00000568993 G3BP1Q13283 466 aaKnown RBP eCLIP19.07■□□□□ 0.64
SNX20-204ENST00000568993 KIF2CQ99661 725 aa19.07■□□□□ 0.64
SNX20-204ENST00000568993 USP26Q9BXU7 913 aa19.07■□□□□ 0.64
SNX20-204ENST00000568993 COPRSQ9NQ92 184 aa19.07■□□□□ 0.64
SNX20-204ENST00000568993 TJP1Q07157 1748 aa19.06■□□□□ 0.64
SNX20-204ENST00000568993 CYP19A1P11511 503 aaPredicted RBP19.06■□□□□ 0.64
SNX20-204ENST00000568993 MARCH10Q8NA82 808 aaPredicted RBP19.06■□□□□ 0.64
SNX20-204ENST00000568993 ISCA1Q9BUE6 129 aa19.06■□□□□ 0.64
SNX20-204ENST00000568993 RFX5P48382 616 aaPredicted RBP19.05■□□□□ 0.64
SNX20-204ENST00000568993 SNX21Q969T3 373 aa19.05■□□□□ 0.64
SNX20-204ENST00000568993 ZBTB3Q9H5J0 574 aa19.05■□□□□ 0.64
SNX20-204ENST00000568993 SASH1O94885 1247 aa19.05■□□□□ 0.64
SNX20-204ENST00000568993 REC8O95072 547 aa19.05■□□□□ 0.64
SNX20-204ENST00000568993 TCIRG1Q13488 830 aa19.05■□□□□ 0.64
SNX20-204ENST00000568993 BCL9LQ86UU0 1499 aa19.04■□□□□ 0.64
SNX20-204ENST00000568993 ERC2O15083 957 aa19.04■□□□□ 0.64
SNX20-204ENST00000568993 VPS72Q15906 364 aa19.04■□□□□ 0.64
SNX20-204ENST00000568993 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.04■□□□□ 0.64
SNX20-204ENST00000568993 SYTL4Q96C24 671 aaPredicted RBP19.03■□□□□ 0.64
SNX20-204ENST00000568993 CHMLP26374 656 aa19.03■□□□□ 0.64
SNX20-204ENST00000568993 FOXO4P98177 505 aa19.03■□□□□ 0.64
SNX20-204ENST00000568993 FNBP4Q8N3X1 1017 aaPredicted RBP19.03■□□□□ 0.64
SNX20-204ENST00000568993 GLRX3O76003 335 aaKnown RBP19.02■□□□□ 0.64
SNX20-204ENST00000568993 PTPN12Q05209 780 aaKnown RBP19.02■□□□□ 0.64
SNX20-204ENST00000568993 KIF6Q6ZMV9 814 aa19.02■□□□□ 0.64
SNX20-204ENST00000568993 JARID2Q92833 1246 aaPredicted RBP19.02■□□□□ 0.64
SNX20-204ENST00000568993 CCDC9Q9Y3X0 531 aaKnown RBP19.02■□□□□ 0.64
SNX20-204ENST00000568993 CICQ96RK0 1608 aaPredicted RBP19.02■□□□□ 0.64
SNX20-204ENST00000568993 SPATA31A6Q5VVP1 1343 aa19.02■□□□□ 0.64
SNX20-204ENST00000568993 AK9Q5TCS8 1911 aa19.02■□□□□ 0.63
SNX20-204ENST00000568993 TRIM6-TRIM34B2RNG4 842 aa19.01■□□□□ 0.63
SNX20-204ENST00000568993 ECHDC1Q9NTX5 307 aa19.01■□□□□ 0.63
SNX20-204ENST00000568993 MAP3K15Q6ZN16 1313 aa19.01■□□□□ 0.63
SNX20-204ENST00000568993 RILPL2Q969X0 211 aa19.01■□□□□ 0.63
SNX20-204ENST00000568993 GPATCH3Q96I76 525 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms