RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 NUDCQ9Y266 331 aa21.1■□□□□ 0.97
HERPUD1-215ENST00000568676 PRPF40BQ6NWY9 871 aaKnown RBP21.09■□□□□ 0.97
HERPUD1-215ENST00000568676 TNS4Q8IZW8 715 aa21.09■□□□□ 0.97
HERPUD1-215ENST00000568676 BCORQ6W2J9 1755 aa21.08■□□□□ 0.97
HERPUD1-215ENST00000568676 PRKAR2BP31323 418 aa21.08■□□□□ 0.97
HERPUD1-215ENST00000568676 RSPH6AQ9H0K4 717 aa21.08■□□□□ 0.97
HERPUD1-215ENST00000568676 ARFGEF2Q9Y6D5 1785 aa21.08■□□□□ 0.96
HERPUD1-215ENST00000568676 IQCA1LA6NCM1 817 aa21.07■□□□□ 0.96
HERPUD1-215ENST00000568676 SNRPA1P09661 255 aaKnown RBP21.07■□□□□ 0.96
HERPUD1-215ENST00000568676 CHADLQ6NUI6 762 aa21.07■□□□□ 0.96
HERPUD1-215ENST00000568676 RTF1Q92541 710 aaKnown RBP21.07■□□□□ 0.96
HERPUD1-215ENST00000568676 CREBZFQ9NS37 354 aa21.07■□□□□ 0.96
HERPUD1-215ENST00000568676 ZNF219Q9P2Y4 722 aaPredicted RBP21.07■□□□□ 0.96
HERPUD1-215ENST00000568676 HSPA1AP0DMV8 641 aaKnown RBP21.06■□□□□ 0.96
HERPUD1-215ENST00000568676 HSPA1BP0DMV9 641 aaKnown RBP21.06■□□□□ 0.96
HERPUD1-215ENST00000568676 NBPF5PQ86XG9 351 aaPredicted RBP21.06■□□□□ 0.96
HERPUD1-215ENST00000568676 CCDC24Q8N4L8 307 aa21.06■□□□□ 0.96
HERPUD1-215ENST00000568676 PHACTR3Q96KR7 559 aa21.06■□□□□ 0.96
HERPUD1-215ENST00000568676 HTATSF1O43719 755 aaKnown RBP21.05■□□□□ 0.96
HERPUD1-215ENST00000568676 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
HERPUD1-215ENST00000568676 KLRG2A4D1S0 409 aaPredicted RBP21.04■□□□□ 0.96
HERPUD1-215ENST00000568676 NPR1P16066 1061 aa21.04■□□□□ 0.96
HERPUD1-215ENST00000568676 CCDC93Q567U6 631 aa21.04■□□□□ 0.96
HERPUD1-215ENST00000568676 TPTE2Q6XPS3 522 aa21.04■□□□□ 0.96
HERPUD1-215ENST00000568676 PCNTO95613 3336 aa21.03■□□□□ 0.96
HERPUD1-215ENST00000568676 KCNQ3O43525 872 aa21.03■□□□□ 0.96
HERPUD1-215ENST00000568676 DDNO94850 711 aaPredicted RBP21.03■□□□□ 0.96
HERPUD1-215ENST00000568676 L3MBTL3Q96JM7 780 aaPredicted RBP21.03■□□□□ 0.96
HERPUD1-215ENST00000568676 SLX4Q8IY92 1834 aa21.03■□□□□ 0.96
HERPUD1-215ENST00000568676 C7orf43Q8WVR3 580 aa21.02■□□□□ 0.96
HERPUD1-215ENST00000568676 LDHDQ86WU2 507 aa21.01■□□□□ 0.95
HERPUD1-215ENST00000568676 RTKN2Q8IZC4 609 aa21.01■□□□□ 0.95
HERPUD1-215ENST00000568676 SCN4AP35499 1836 aa21■□□□□ 0.95
HERPUD1-215ENST00000568676 U2AF1L5P0DN76 240 aaPredicted RBP21■□□□□ 0.95
HERPUD1-215ENST00000568676 ALDH1B1P30837 517 aa21■□□□□ 0.95
HERPUD1-215ENST00000568676 U2AF1Q01081 240 aaKnown RBP eCLIP21■□□□□ 0.95
HERPUD1-215ENST00000568676 FKBP4Q02790 459 aaKnown RBP eCLIP21■□□□□ 0.95
HERPUD1-215ENST00000568676 CNGB1Q14028 1251 aaPredicted RBP21■□□□□ 0.95
HERPUD1-215ENST00000568676 NIP7Q9Y221 180 aaKnown RBP eCLIP20.99■□□□□ 0.95
HERPUD1-215ENST00000568676 TAF1DQ9H5J8 278 aaPredicted RBP20.98■□□□□ 0.95
HERPUD1-215ENST00000568676 CACNA1SQ13698 1873 aa20.98■□□□□ 0.95
HERPUD1-215ENST00000568676 PIP4K2AP48426 406 aaPredicted RBP20.97■□□□□ 0.95
HERPUD1-215ENST00000568676 MCM10Q7L590 875 aa20.97■□□□□ 0.95
HERPUD1-215ENST00000568676 PASKQ96RG2 1323 aa20.97■□□□□ 0.95
HERPUD1-215ENST00000568676 PRAMEF22A3QJZ6 481 aa20.96■□□□□ 0.95
HERPUD1-215ENST00000568676 TAF7Q15545 349 aaPredicted RBP20.96■□□□□ 0.95
HERPUD1-215ENST00000568676 CNTNAP1P78357 1384 aa20.96■□□□□ 0.95
HERPUD1-215ENST00000568676 NBPF26B4DH59 902 aa20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 POTEIP0CG38 1075 aa20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 POTEJP0CG39 1038 aa20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 GTF2E1P29083 439 aaPredicted RBP20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 NBPF10Q6P3W6 841 aaKnown RBP20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 PNMA8AQ86V59 439 aaPredicted RBP20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 NBPF15Q8N660 670 aa20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 PNISRQ8TF01 805 aaKnown RBP20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 NYXQ9GZU5 481 aa20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 MKRN1Q9UHC7 482 aaKnown RBP20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 HACL1Q9UJ83 578 aa20.95■□□□□ 0.94
HERPUD1-215ENST00000568676 CAPN15O75808 1086 aa20.94■□□□□ 0.94
HERPUD1-215ENST00000568676 NEFMP07197 916 aa20.94■□□□□ 0.94
HERPUD1-215ENST00000568676 PPP2R1AP30153 589 aa20.94■□□□□ 0.94
HERPUD1-215ENST00000568676 GRIPAP1Q4V328 841 aa20.94■□□□□ 0.94
HERPUD1-215ENST00000568676 CC2D2BQ6DHV5 1058 aa20.94■□□□□ 0.94
HERPUD1-215ENST00000568676 ERVV-1B6SEH8 477 aa20.93■□□□□ 0.94
HERPUD1-215ENST00000568676 TMEM88BA6NKF7 163 aa20.92■□□□□ 0.94
HERPUD1-215ENST00000568676 FZD9O00144 591 aa20.92■□□□□ 0.94
HERPUD1-215ENST00000568676 IARSP41252 1262 aaKnown RBP20.92■□□□□ 0.94
HERPUD1-215ENST00000568676 PSMD1Q99460 953 aa20.92■□□□□ 0.94
HERPUD1-215ENST00000568676 ZNF277Q9NRM2 450 aaPredicted RBP20.92■□□□□ 0.94
HERPUD1-215ENST00000568676 LAMB4A4D0S4 1761 aa20.91■□□□□ 0.94
HERPUD1-215ENST00000568676 ITGBL1O95965 494 aaPredicted RBP20.91■□□□□ 0.94
HERPUD1-215ENST00000568676 EPHX2P34913 555 aa20.91■□□□□ 0.94
HERPUD1-215ENST00000568676 CRY2Q49AN0 593 aa20.91■□□□□ 0.94
HERPUD1-215ENST00000568676 GPC2Q8N158 579 aa20.91■□□□□ 0.94
HERPUD1-215ENST00000568676 RIC1Q4ADV7 1423 aa20.9■□□□□ 0.94
HERPUD1-215ENST00000568676 IBTKQ9P2D0 1353 aaPredicted RBP20.9■□□□□ 0.94
HERPUD1-215ENST00000568676 ZNF541Q9H0D2 1346 aa20.9■□□□□ 0.94
HERPUD1-215ENST00000568676 DCTN1Q14203 1278 aa20.9■□□□□ 0.94
HERPUD1-215ENST00000568676 EAPPQ56P03 285 aaPredicted RBP20.9■□□□□ 0.94
HERPUD1-215ENST00000568676 JDP2Q8WYK2 163 aa20.9■□□□□ 0.94
HERPUD1-215ENST00000568676 PRDM10Q9NQV6 1147 aa20.9■□□□□ 0.94
HERPUD1-215ENST00000568676 HLFQ16534 295 aa20.89■□□□□ 0.93
HERPUD1-215ENST00000568676 SYNE4Q8N205 404 aa20.89■□□□□ 0.93
HERPUD1-215ENST00000568676 AIDAQ96BJ3 306 aa20.89■□□□□ 0.93
HERPUD1-215ENST00000568676 FAM177BA6PVY3 158 aa20.88■□□□□ 0.93
HERPUD1-215ENST00000568676 KIF6Q6ZMV9 814 aa20.88■□□□□ 0.93
HERPUD1-215ENST00000568676 CLEC11AQ9Y240 323 aa20.88■□□□□ 0.93
HERPUD1-215ENST00000568676 ADAMTSL1Q8N6G6 1762 aa20.87■□□□□ 0.93
HERPUD1-215ENST00000568676 MAP3K15Q6ZN16 1313 aa20.87■□□□□ 0.93
HERPUD1-215ENST00000568676 SNED1Q8TER0 1413 aa20.87■□□□□ 0.93
HERPUD1-215ENST00000568676 HOXA10P31260 410 aaPredicted RBP20.86■□□□□ 0.93
HERPUD1-215ENST00000568676 CTCFP49711 727 aaPredicted RBP20.86■□□□□ 0.93
HERPUD1-215ENST00000568676 EIF6P56537 245 aaKnown RBP20.86■□□□□ 0.93
HERPUD1-215ENST00000568676 RPGRQ92834 1020 aaKnown RBP20.86■□□□□ 0.93
HERPUD1-215ENST00000568676 ERBB4Q15303 1308 aa20.85■□□□□ 0.93
HERPUD1-215ENST00000568676 RNF123Q5XPI4 1314 aa20.85■□□□□ 0.93
HERPUD1-215ENST00000568676 FOXN1O15353 648 aa20.85■□□□□ 0.93
HERPUD1-215ENST00000568676 VEGFBP49765 207 aa20.85■□□□□ 0.93
HERPUD1-215ENST00000568676 OLFM4Q6UX06 510 aa20.85■□□□□ 0.93
HERPUD1-215ENST00000568676 CNTROBQ8N137 903 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms