RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 AIMP1Q12904 312 aaKnown RBP11.72□□□□□ -0.53
TCF4-240ENST00000568673 SCN11AQ9UI33 1791 aa11.72□□□□□ -0.53
TCF4-240ENST00000568673 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
TCF4-240ENST00000568673 CUL4AQ13619 759 aa11.72□□□□□ -0.53
TCF4-240ENST00000568673 KLHL40Q2TBA0 621 aa11.72□□□□□ -0.53
TCF4-240ENST00000568673 LARP1Q6PKG0 1096 aaKnown RBP11.72□□□□□ -0.53
TCF4-240ENST00000568673 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
TCF4-240ENST00000568673 KAZALD1Q96I82 304 aa11.72□□□□□ -0.53
TCF4-240ENST00000568673 ABCC6O95255 1503 aa11.72□□□□□ -0.53
TCF4-240ENST00000568673 COL18A1P39060 1754 aa11.72□□□□□ -0.53
TCF4-240ENST00000568673 MEGF6O75095 1541 aa11.71□□□□□ -0.53
TCF4-240ENST00000568673 RIC3Q7Z5B4 369 aa11.71□□□□□ -0.53
TCF4-240ENST00000568673 INTS4Q96HW7 963 aaKnown RBP11.71□□□□□ -0.53
TCF4-240ENST00000568673 DCAF5Q96JK2 942 aa11.71□□□□□ -0.53
TCF4-240ENST00000568673 IGKV5-2P06315 115 aa11.71□□□□□ -0.54
TCF4-240ENST00000568673 SUCLG2Q96I99 432 aa11.71□□□□□ -0.54
TCF4-240ENST00000568673 ZNF496Q96IT1 587 aaPredicted RBP11.71□□□□□ -0.54
TCF4-240ENST00000568673 GRPEL1Q9HAV7 217 aa11.71□□□□□ -0.54
TCF4-240ENST00000568673 ECHDC1Q9NTX5 307 aa11.71□□□□□ -0.54
TCF4-240ENST00000568673 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.54
TCF4-240ENST00000568673 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.54
TCF4-240ENST00000568673 DDX49Q9Y6V7 483 aaKnown RBP11.71□□□□□ -0.54
TCF4-240ENST00000568673 RAD50Q92878 1312 aa11.71□□□□□ -0.54
TCF4-240ENST00000568673 TNS3Q68CZ2 1445 aa11.71□□□□□ -0.54
TCF4-240ENST00000568673 STRCP1A6NGW2 1772 aa11.7□□□□□ -0.54
TCF4-240ENST00000568673 NEXNQ0ZGT2 675 aa11.7□□□□□ -0.54
TCF4-240ENST00000568673 MCTP1Q6DN14 999 aa11.7□□□□□ -0.54
TCF4-240ENST00000568673 GPATCH3Q96I76 525 aa11.7□□□□□ -0.54
TCF4-240ENST00000568673 BICC1Q9H694 974 aaKnown RBP11.7□□□□□ -0.54
TCF4-240ENST00000568673 CRYBG1Q9Y4K1 1723 aa11.7□□□□□ -0.54
TCF4-240ENST00000568673 SPATA31A3Q5VYP0 1347 aa11.7□□□□□ -0.54
TCF4-240ENST00000568673 CYP27B1O15528 508 aa11.7□□□□□ -0.54
TCF4-240ENST00000568673 SNRPA1P09661 255 aaKnown RBP11.7□□□□□ -0.54
TCF4-240ENST00000568673 IFIT2P09913 472 aaKnown RBP11.7□□□□□ -0.54
TCF4-240ENST00000568673 MYL6BP14649 208 aa11.7□□□□□ -0.54
TCF4-240ENST00000568673 CHRNA2Q15822 529 aa11.7□□□□□ -0.54
TCF4-240ENST00000568673 COPS6Q7L5N1 327 aa11.7□□□□□ -0.54
TCF4-240ENST00000568673 LSG1Q9H089 658 aaKnown RBP11.7□□□□□ -0.54
TCF4-240ENST00000568673 NEURL1BA8MQ27 555 aa11.69□□□□□ -0.54
TCF4-240ENST00000568673 CWC27Q6UX04 472 aaKnown RBP11.69□□□□□ -0.54
TCF4-240ENST00000568673 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
TCF4-240ENST00000568673 FAM43AQ8N2R8 423 aa11.69□□□□□ -0.54
TCF4-240ENST00000568673 XAGE3Q8WTP9 111 aa11.69□□□□□ -0.54
TCF4-240ENST00000568673 METTL22Q9BUU2 404 aaPredicted RBP11.69□□□□□ -0.54
TCF4-240ENST00000568673 LMBRD1Q9NUN5 540 aa11.69□□□□□ -0.54
TCF4-240ENST00000568673 CPDO75976 1380 aa11.69□□□□□ -0.54
TCF4-240ENST00000568673 SASH1O94885 1247 aa11.69□□□□□ -0.54
TCF4-240ENST00000568673 G3BP1Q13283 466 aaKnown RBP eCLIP11.69□□□□□ -0.54
TCF4-240ENST00000568673 KIAA1211Q6ZU35 1233 aa11.69□□□□□ -0.54
TCF4-240ENST00000568673 LRP10Q7Z4F1 713 aa11.69□□□□□ -0.54
TCF4-240ENST00000568673 PANK2Q9BZ23 570 aa11.69□□□□□ -0.54
TCF4-240ENST00000568673 UPF3BQ9BZI7 483 aaKnown RBP11.69□□□□□ -0.54
TCF4-240ENST00000568673 GCKRQ14397 625 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 ANKRD13DQ6ZTN6 518 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 AACSQ86V21 672 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 GAS2L3Q86XJ1 694 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 RUFY2Q8WXA3 655 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 C5P01031 1676 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 EVI5LQ96CN4 794 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 DIAPH3Q9NSV4 1193 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 SNX14Q9Y5W7 946 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 MRC1P22897 1456 aa11.68□□□□□ -0.54
TCF4-240ENST00000568673 MYD88Q99836 296 aa11.67□□□□□ -0.54
TCF4-240ENST00000568673 NPM3O75607 178 aaKnown RBP11.67□□□□□ -0.54
TCF4-240ENST00000568673 BRD1O95696 1058 aa11.67□□□□□ -0.54
TCF4-240ENST00000568673 HOMEZQ8IX15 550 aa11.67□□□□□ -0.54
TCF4-240ENST00000568673 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
TCF4-240ENST00000568673 PRPF40AO75400 957 aaKnown RBP11.66□□□□□ -0.54
TCF4-240ENST00000568673 CABP4P57796 275 aa11.66□□□□□ -0.54
TCF4-240ENST00000568673 NOL8Q76FK4 1167 aaKnown RBP11.65□□□□□ -0.54
TCF4-240ENST00000568673 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
TCF4-240ENST00000568673 TTC14Q96N46 770 aa11.65□□□□□ -0.54
TCF4-240ENST00000568673 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.65□□□□□ -0.54
TCF4-240ENST00000568673 PKD1L3Q7Z443 1732 aa11.65□□□□□ -0.54
TCF4-240ENST00000568673 CCDC8Q9H0W5 538 aaPredicted RBP11.65□□□□□ -0.54
TCF4-240ENST00000568673 HIP1O00291 1037 aa11.64□□□□□ -0.55
TCF4-240ENST00000568673 EPHA10Q5JZY3 1008 aa11.64□□□□□ -0.55
TCF4-240ENST00000568673 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
TCF4-240ENST00000568673 SIL1Q9H173 461 aa11.64□□□□□ -0.55
TCF4-240ENST00000568673 ZNF445P59923 1031 aa11.64□□□□□ -0.55
TCF4-240ENST00000568673 COPRSQ9NQ92 184 aa11.64□□□□□ -0.55
TCF4-240ENST00000568673 COL15A1P39059 1388 aa11.63□□□□□ -0.55
TCF4-240ENST00000568673 NCLP19338 710 aaKnown RBP11.63□□□□□ -0.55
TCF4-240ENST00000568673 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
TCF4-240ENST00000568673 HSPA2P54652 639 aa11.63□□□□□ -0.55
TCF4-240ENST00000568673 PTH1RQ03431 593 aa11.63□□□□□ -0.55
TCF4-240ENST00000568673 PIAS4Q8N2W9 510 aaPredicted RBP11.63□□□□□ -0.55
TCF4-240ENST00000568673 KLHDC4Q8TBB5 520 aa11.63□□□□□ -0.55
TCF4-240ENST00000568673 KCNB2Q92953 911 aa11.63□□□□□ -0.55
TCF4-240ENST00000568673 WDR17Q8IZU2 1322 aa11.63□□□□□ -0.55
TCF4-240ENST00000568673 AK2P54819 239 aa11.63□□□□□ -0.55
TCF4-240ENST00000568673 RABL6Q3YEC7 729 aaPredicted RBP11.63□□□□□ -0.55
TCF4-240ENST00000568673 CAVIN1Q6NZI2 390 aaKnown RBP11.63□□□□□ -0.55
TCF4-240ENST00000568673 GPT2Q8TD30 523 aa11.63□□□□□ -0.55
TCF4-240ENST00000568673 LIMCH1Q9UPQ0 1083 aa11.63□□□□□ -0.55
TCF4-240ENST00000568673 NECTIN1Q15223 517 aa11.62□□□□□ -0.55
TCF4-240ENST00000568673 ZSCAN23Q3MJ62 389 aa11.62□□□□□ -0.55
TCF4-240ENST00000568673 FOXD4L5Q5VV16 416 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms