RNA–Protein interactions for RNA: ENST00000568468.5

GINS3-210, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-210ENST00000568468 C8orf58Q8NAV2 365 aa7.86□□□□□ -1.15
GINS3-210ENST00000568468 NECTIN2Q92692 538 aa7.86□□□□□ -1.15
GINS3-210ENST00000568468 BCL2L13Q9BXK5 485 aa7.86□□□□□ -1.15
GINS3-210ENST00000568468 ZSWIM6Q9HCJ5 1215 aa7.86□□□□□ -1.15
GINS3-210ENST00000568468 PLEKHG2Q9H7P9 1386 aa7.85□□□□□ -1.15
GINS3-210ENST00000568468 PRAMEF22A3QJZ6 481 aa7.85□□□□□ -1.15
GINS3-210ENST00000568468 KCNQ2O43526 872 aa7.85□□□□□ -1.15
GINS3-210ENST00000568468 PIGBQ92521 554 aa7.85□□□□□ -1.15
GINS3-210ENST00000568468 MARVELD3Q96A59 401 aa7.85□□□□□ -1.15
GINS3-210ENST00000568468 LARP6Q9BRS8 491 aaKnown RBP7.85□□□□□ -1.15
GINS3-210ENST00000568468 TNS1Q9HBL0 1735 aaKnown RBP7.85□□□□□ -1.15
GINS3-210ENST00000568468 TOGARAM1Q9Y4F4 1720 aa7.84□□□□□ -1.15
GINS3-210ENST00000568468 TRIM37O94972 964 aa7.84□□□□□ -1.15
GINS3-210ENST00000568468 HOXB1P14653 301 aaPredicted RBP7.84□□□□□ -1.15
GINS3-210ENST00000568468 TMOD3Q9NYL9 352 aa7.84□□□□□ -1.15
GINS3-210ENST00000568468 ASAP1Q9ULH1 1129 aa7.84□□□□□ -1.15
GINS3-210ENST00000568468 SUPT16HQ9Y5B9 1047 aaKnown RBP7.84□□□□□ -1.15
GINS3-210ENST00000568468 MRC1P22897 1456 aa7.83□□□□□ -1.16
GINS3-210ENST00000568468 ERVV-2B6SEH9 535 aa7.83□□□□□ -1.16
GINS3-210ENST00000568468 PLIN1O60240 522 aa7.83□□□□□ -1.16
GINS3-210ENST00000568468 PTCD1O75127 700 aaKnown RBP7.83□□□□□ -1.16
GINS3-210ENST00000568468 BCAR3O75815 825 aa7.83□□□□□ -1.16
GINS3-210ENST00000568468 EIF4A1P60842 406 aaKnown RBP7.83□□□□□ -1.16
GINS3-210ENST00000568468 IRX6P78412 446 aaPredicted RBP7.83□□□□□ -1.16
GINS3-210ENST00000568468 SF3B2Q13435 895 aaKnown RBP7.83□□□□□ -1.16
GINS3-210ENST00000568468 TWISTNBQ3B726 338 aaPredicted RBP7.83□□□□□ -1.16
GINS3-210ENST00000568468 DEFB132Q7Z7B7 95 aa7.83□□□□□ -1.16
GINS3-210ENST00000568468 PLPP6Q8IY26 295 aa7.83□□□□□ -1.16
GINS3-210ENST00000568468 VSIG10Q8N0Z9 540 aa7.83□□□□□ -1.16
GINS3-210ENST00000568468 RCAN3Q9UKA8 241 aa7.83□□□□□ -1.16
GINS3-210ENST00000568468 ADAMTS7Q9UKP4 1686 aa7.83□□□□□ -1.16
GINS3-210ENST00000568468 VAMP4O75379 141 aa7.82□□□□□ -1.16
GINS3-210ENST00000568468 EIF2S2P20042 333 aaKnown RBP7.82□□□□□ -1.16
GINS3-210ENST00000568468 BAG6P46379 1132 aa7.82□□□□□ -1.16
GINS3-210ENST00000568468 PPP1R15BQ5SWA1 713 aa7.82□□□□□ -1.16
GINS3-210ENST00000568468 ZNF790Q6PG37 636 aa7.82□□□□□ -1.16
GINS3-210ENST00000568468 TTC5Q8N0Z6 440 aa7.82□□□□□ -1.16
GINS3-210ENST00000568468 PTCD2Q8WV60 388 aaKnown RBP7.82□□□□□ -1.16
GINS3-210ENST00000568468 DDX27Q96GQ7 796 aaKnown RBP7.82□□□□□ -1.16
GINS3-210ENST00000568468 ZNF496Q96IT1 587 aaPredicted RBP7.82□□□□□ -1.16
GINS3-210ENST00000568468 ATG3Q9NT62 314 aa7.82□□□□□ -1.16
GINS3-210ENST00000568468 ARIH1Q9Y4X5 557 aaPredicted RBP7.82□□□□□ -1.16
GINS3-210ENST00000568468 DOT1LQ8TEK3 1739 aa7.81□□□□□ -1.16
GINS3-210ENST00000568468 SBF2Q86WG5 1849 aa7.81□□□□□ -1.16
GINS3-210ENST00000568468 PIP4K2AP48426 406 aaPredicted RBP7.81□□□□□ -1.16
GINS3-210ENST00000568468 RARSP54136 660 aaKnown RBP7.81□□□□□ -1.16
GINS3-210ENST00000568468 KCNQ4P56696 695 aa7.81□□□□□ -1.16
GINS3-210ENST00000568468 EN1Q05925 392 aaPredicted RBP7.81□□□□□ -1.16
GINS3-210ENST00000568468 SSH1Q8WYL5 1049 aa7.81□□□□□ -1.16
GINS3-210ENST00000568468 CAMKK2Q96RR4 588 aa7.81□□□□□ -1.16
GINS3-210ENST00000568468 SMC4Q9NTJ3 1288 aa7.81□□□□□ -1.16
GINS3-210ENST00000568468 TNNQ9UQP3 1299 aa7.81□□□□□ -1.16
GINS3-210ENST00000568468 NHSQ6T4R5 1651 aa7.81□□□□□ -1.16
GINS3-210ENST00000568468 SCN11AQ9UI33 1791 aa7.81□□□□□ -1.16
GINS3-210ENST00000568468 APBA3O96018 575 aa7.8□□□□□ -1.16
GINS3-210ENST00000568468 ANXA1P04083 346 aa7.8□□□□□ -1.16
GINS3-210ENST00000568468 GPR153Q6NV75 609 aa7.8□□□□□ -1.16
GINS3-210ENST00000568468 OXER1Q8TDS5 423 aa7.8□□□□□ -1.16
GINS3-210ENST00000568468 FRAT1Q92837 279 aaPredicted RBP7.8□□□□□ -1.16
GINS3-210ENST00000568468 SLC4A9Q96Q91 983 aa7.8□□□□□ -1.16
GINS3-210ENST00000568468 BABAM1Q9NWV8 329 aa7.8□□□□□ -1.16
GINS3-210ENST00000568468 KCPQ6ZWJ8 1503 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 PLSCR1O15162 318 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 GIGYF1O75420 1035 aaPredicted RBP7.79□□□□□ -1.16
GINS3-210ENST00000568468 RRP1P56182 461 aaKnown RBP7.79□□□□□ -1.16
GINS3-210ENST00000568468 EZH2Q15910 746 aaKnown RBP7.79□□□□□ -1.16
GINS3-210ENST00000568468 HDGFL1Q5TGJ6 251 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 CDAN1Q8IWY9 1227 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 DNAJC10Q8IXB1 793 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 FMNL2Q96PY5 1086 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 EMILIN3Q9NT22 766 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 USP16Q9Y5T5 823 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 HEG1Q9ULI3 1381 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 RREB1Q92766 1687 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 RGPD3A6NKT7 1758 aaPredicted RBP7.79□□□□□ -1.16
GINS3-210ENST00000568468 SIPA1L3O60292 1781 aaPredicted RBP7.79□□□□□ -1.16
GINS3-210ENST00000568468 KDM3BQ7LBC6 1761 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 RGPD4Q7Z3J3 1758 aa7.79□□□□□ -1.16
GINS3-210ENST00000568468 SNRPA1P09661 255 aaKnown RBP7.78□□□□□ -1.16
GINS3-210ENST00000568468 PROSER3Q2NL68 480 aa7.78□□□□□ -1.16
GINS3-210ENST00000568468 C20orf194Q5TEA3 1177 aa7.78□□□□□ -1.16
GINS3-210ENST00000568468 G2E3Q7L622 706 aa7.78□□□□□ -1.16
GINS3-210ENST00000568468 MRPL50Q8N5N7 158 aaKnown RBP7.78□□□□□ -1.16
GINS3-210ENST00000568468 CHPF2Q9P2E5 772 aa7.78□□□□□ -1.16
GINS3-210ENST00000568468 NOB1Q9ULX3 412 aaKnown RBP7.78□□□□□ -1.16
GINS3-210ENST00000568468 PALLDQ8WX93 1383 aa7.78□□□□□ -1.16
GINS3-210ENST00000568468 FAM205CA6NFA0 338 aa7.77□□□□□ -1.17
GINS3-210ENST00000568468 A1BGP04217 495 aa7.77□□□□□ -1.17
GINS3-210ENST00000568468 CT47B1P0C2W7 299 aaPredicted RBP7.77□□□□□ -1.17
GINS3-210ENST00000568468 MYL6BP14649 208 aa7.77□□□□□ -1.17
GINS3-210ENST00000568468 CANXP27824 592 aaKnown RBP7.77□□□□□ -1.17
GINS3-210ENST00000568468 ITPK1Q13572 414 aa7.77□□□□□ -1.17
GINS3-210ENST00000568468 CLUAP1Q96AJ1 413 aa7.77□□□□□ -1.17
GINS3-210ENST00000568468 HS3ST6Q96QI5 342 aa7.77□□□□□ -1.17
GINS3-210ENST00000568468 VIRMAQ69YN4 1812 aaKnown RBP7.77□□□□□ -1.17
GINS3-210ENST00000568468 BTAF1O14981 1849 aa7.76□□□□□ -1.17
GINS3-210ENST00000568468 NUP188Q5SRE5 1749 aa7.76□□□□□ -1.17
GINS3-210ENST00000568468 LOC102724428A0A0B4J2F2 783 aa7.76□□□□□ -1.17
GINS3-210ENST00000568468 ATP6V1AP38606 617 aa7.76□□□□□ -1.17
GINS3-210ENST00000568468 SIK1P57059 783 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms