RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ERBB4Q15303 1308 aa22.23■■□□□ 1.15
SMPD3-211ENST00000568373 TRIM6-TRIM34B2RNG4 842 aa22.22■■□□□ 1.15
SMPD3-211ENST00000568373 OS9Q13438 667 aaPredicted RBP22.22■■□□□ 1.15
SMPD3-211ENST00000568373 GCKRQ14397 625 aa22.22■■□□□ 1.15
SMPD3-211ENST00000568373 MYD88Q99836 296 aa22.22■■□□□ 1.15
SMPD3-211ENST00000568373 RBM42Q9BTD8 480 aaKnown RBP22.22■■□□□ 1.15
SMPD3-211ENST00000568373 BICC1Q9H694 974 aaKnown RBP22.22■■□□□ 1.15
SMPD3-211ENST00000568373 RABEP1Q15276 862 aa22.22■■□□□ 1.15
SMPD3-211ENST00000568373 KCPQ6ZWJ8 1503 aa22.22■■□□□ 1.15
SMPD3-211ENST00000568373 RILPL2Q969X0 211 aa22.21■■□□□ 1.15
SMPD3-211ENST00000568373 ARFGEF2Q9Y6D5 1785 aa22.21■■□□□ 1.15
SMPD3-211ENST00000568373 CD2BP2O95400 341 aaKnown RBP22.21■■□□□ 1.15
SMPD3-211ENST00000568373 ERC1Q8IUD2 1116 aa22.21■■□□□ 1.15
SMPD3-211ENST00000568373 PI4K2BQ8TCG2 481 aa22.21■■□□□ 1.15
SMPD3-211ENST00000568373 CHMP5Q9NZZ3 219 aa22.21■■□□□ 1.15
SMPD3-211ENST00000568373 CHMLP26374 656 aa22.2■■□□□ 1.14
SMPD3-211ENST00000568373 ESYT1Q9BSJ8 1104 aa22.2■■□□□ 1.14
SMPD3-211ENST00000568373 UNC5CLQ8IV45 518 aa22.19■■□□□ 1.14
SMPD3-211ENST00000568373 BTG4Q9NY30 223 aa22.19■■□□□ 1.14
SMPD3-211ENST00000568373 USP42Q9H9J4 1324 aaKnown RBP22.19■■□□□ 1.14
SMPD3-211ENST00000568373 TNS2Q63HR2 1409 aa22.19■■□□□ 1.14
SMPD3-211ENST00000568373 K7ELQ4 463 aaPredicted RBP22.19■■□□□ 1.14
SMPD3-211ENST00000568373 PA2G4Q9UQ80 394 aaKnown RBP22.19■■□□□ 1.14
SMPD3-211ENST00000568373 CLASRPQ8N2M8 674 aaKnown RBP22.18■■□□□ 1.14
SMPD3-211ENST00000568373 PLBD2Q8NHP8 589 aa22.18■■□□□ 1.14
SMPD3-211ENST00000568373 AFDNP55196 1824 aaKnown RBP22.18■■□□□ 1.14
SMPD3-211ENST00000568373 COL14A1Q05707 1796 aaKnown RBP22.18■■□□□ 1.14
SMPD3-211ENST00000568373 AHDC1Q5TGY3 1603 aaPredicted RBP22.18■■□□□ 1.14
SMPD3-211ENST00000568373 TOGARAM1Q9Y4F4 1720 aa22.18■■□□□ 1.14
SMPD3-211ENST00000568373 AK9Q5TCS8 1911 aa22.17■■□□□ 1.14
SMPD3-211ENST00000568373 NBPF26B4DH59 902 aa22.17■■□□□ 1.14
SMPD3-211ENST00000568373 DDIT3P35638 169 aa22.17■■□□□ 1.14
SMPD3-211ENST00000568373 NBPF14Q5TI25 921 aa22.17■■□□□ 1.14
SMPD3-211ENST00000568373 NBPF10Q6P3W6 841 aaKnown RBP22.17■■□□□ 1.14
SMPD3-211ENST00000568373 NBPF15Q8N660 670 aa22.17■■□□□ 1.14
SMPD3-211ENST00000568373 TTC41PQ6P2S7 1318 aa22.17■■□□□ 1.14
SMPD3-211ENST00000568373 COL22A1Q8NFW1 1626 aaPredicted RBP22.15■■□□□ 1.14
SMPD3-211ENST00000568373 COL15A1P39059 1388 aa22.15■■□□□ 1.14
SMPD3-211ENST00000568373 PTCD1O75127 700 aaKnown RBP22.15■■□□□ 1.14
SMPD3-211ENST00000568373 GLRX3O76003 335 aaKnown RBP22.13■■□□□ 1.13
SMPD3-211ENST00000568373 G3BP1Q13283 466 aaKnown RBP eCLIP22.13■■□□□ 1.13
SMPD3-211ENST00000568373 EPHA10Q5JZY3 1008 aa22.13■■□□□ 1.13
SMPD3-211ENST00000568373 TMOD3Q9NYL9 352 aa22.13■■□□□ 1.13
SMPD3-211ENST00000568373 CNTROBQ8N137 903 aa22.13■■□□□ 1.13
SMPD3-211ENST00000568373 DISP2A7MBM2 1401 aa22.12■■□□□ 1.13
SMPD3-211ENST00000568373 ATP5J2-PTCD1G3V325 749 aa22.12■■□□□ 1.13
SMPD3-211ENST00000568373 SASH1O94885 1247 aa22.12■■□□□ 1.13
SMPD3-211ENST00000568373 GPATCH3Q96I76 525 aa22.12■■□□□ 1.13
SMPD3-211ENST00000568373 CIZ1Q9ULV3 898 aaPredicted RBP22.12■■□□□ 1.13
SMPD3-211ENST00000568373 COL16A1Q07092 1604 aaPredicted RBP22.12■■□□□ 1.13
SMPD3-211ENST00000568373 NUP188Q5SRE5 1749 aa22.12■■□□□ 1.13
SMPD3-211ENST00000568373 MAP4K4O95819 1239 aaPredicted RBP22.11■■□□□ 1.13
SMPD3-211ENST00000568373 A1BGP04217 495 aa22.11■■□□□ 1.13
SMPD3-211ENST00000568373 HSP90AA1P07900 732 aaKnown RBP22.11■■□□□ 1.13
SMPD3-211ENST00000568373 IFIT2P09913 472 aaKnown RBP22.11■■□□□ 1.13
SMPD3-211ENST00000568373 UBE3BQ7Z3V4 1068 aa22.11■■□□□ 1.13
SMPD3-211ENST00000568373 ECHDC1Q9NTX5 307 aa22.11■■□□□ 1.13
SMPD3-211ENST00000568373 ANO2Q9NQ90 1003 aa22.11■■□□□ 1.13
SMPD3-211ENST00000568373 A0A087WZG4 1122 aa22.1■■□□□ 1.13
SMPD3-211ENST00000568373 RABL6Q3YEC7 729 aaPredicted RBP22.1■■□□□ 1.13
SMPD3-211ENST00000568373 TTLL7Q6ZT98 887 aa22.1■■□□□ 1.13
SMPD3-211ENST00000568373 AACSQ86V21 672 aa22.1■■□□□ 1.13
SMPD3-211ENST00000568373 EPB41L2O43491 1005 aaKnown RBP22.1■■□□□ 1.13
SMPD3-211ENST00000568373 ST18O60284 1047 aa22.1■■□□□ 1.13
SMPD3-211ENST00000568373 MCCP23508 829 aa22.1■■□□□ 1.13
SMPD3-211ENST00000568373 PLCH1Q4KWH8 1693 aa22.09■■□□□ 1.13
SMPD3-211ENST00000568373 CASP7P55210 303 aa22.09■■□□□ 1.13
SMPD3-211ENST00000568373 JARID2Q92833 1246 aaPredicted RBP22.08■■□□□ 1.13
SMPD3-211ENST00000568373 SIL1Q9H173 461 aa22.08■■□□□ 1.13
SMPD3-211ENST00000568373 COPRSQ9NQ92 184 aa22.08■■□□□ 1.13
SMPD3-211ENST00000568373 PIGBQ92521 554 aa22.08■■□□□ 1.12
SMPD3-211ENST00000568373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.08■■□□□ 1.12
SMPD3-211ENST00000568373 ANAPC15P60006 121 aa22.07■■□□□ 1.12
SMPD3-211ENST00000568373 KLHDC4Q8TBB5 520 aa22.07■■□□□ 1.12
SMPD3-211ENST00000568373 EAF2Q96CJ1 260 aaPredicted RBP22.07■■□□□ 1.12
SMPD3-211ENST00000568373 IL25Q9H293 177 aa22.07■■□□□ 1.12
SMPD3-211ENST00000568373 ITGB4P16144 1822 aa22.07■■□□□ 1.12
SMPD3-211ENST00000568373 RFX5P48382 616 aaPredicted RBP22.07■■□□□ 1.12
SMPD3-211ENST00000568373 GSE1Q14687 1217 aa22.06■■□□□ 1.12
SMPD3-211ENST00000568373 ASAP1Q9ULH1 1129 aa22.06■■□□□ 1.12
SMPD3-211ENST00000568373 PHLPP1O60346 1717 aa22.05■■□□□ 1.12
SMPD3-211ENST00000568373 H7C1W4 665 aa22.05■■□□□ 1.12
SMPD3-211ENST00000568373 SGSM2O43147 1006 aa22.05■■□□□ 1.12
SMPD3-211ENST00000568373 VSIG10Q8N0Z9 540 aa22.05■■□□□ 1.12
SMPD3-211ENST00000568373 CWC25Q9NXE8 425 aaPredicted RBP22.05■■□□□ 1.12
SMPD3-211ENST00000568373 MCM4P33991 863 aa22.05■■□□□ 1.12
SMPD3-211ENST00000568373 PTPN12Q05209 780 aaKnown RBP22.05■■□□□ 1.12
SMPD3-211ENST00000568373 IL17RAQ96F46 866 aa22.05■■□□□ 1.12
SMPD3-211ENST00000568373 TEX13AQ9BXU3 409 aaPredicted RBP22.05■■□□□ 1.12
SMPD3-211ENST00000568373 FOXD4L1Q9NU39 408 aa22.05■■□□□ 1.12
SMPD3-211ENST00000568373 LRP6O75581 1613 aa22.04■■□□□ 1.12
SMPD3-211ENST00000568373 TJP1Q07157 1748 aa22.04■■□□□ 1.12
SMPD3-211ENST00000568373 ZBTB3Q9H5J0 574 aa22.04■■□□□ 1.12
SMPD3-211ENST00000568373 ATG3Q9NT62 314 aa22.04■■□□□ 1.12
SMPD3-211ENST00000568373 PALD1Q9ULE6 856 aa22.04■■□□□ 1.12
SMPD3-211ENST00000568373 WNK3Q9BYP7 1800 aa22.03■■□□□ 1.12
SMPD3-211ENST00000568373 HSPA1LP34931 641 aa22.03■■□□□ 1.12
SMPD3-211ENST00000568373 CCDC191Q8NCU4 936 aa22.03■■□□□ 1.12
SMPD3-211ENST00000568373 CCDC8Q9H0W5 538 aaPredicted RBP22.03■■□□□ 1.12
SMPD3-211ENST00000568373 RAB3GAP1Q15042 981 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms