RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 NPC1L1Q9UHC9 1359 aa6.22□□□□□ -1.41
HERPUD1-213ENST00000568358 N4BP2Q86UW6 1770 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-213ENST00000568358 UTRNP46939 3433 aa6.22□□□□□ -1.41
HERPUD1-213ENST00000568358 A0A087WZG4 1122 aa6.22□□□□□ -1.41
HERPUD1-213ENST00000568358 A0A0G2JLW4 131 aa6.22□□□□□ -1.41
HERPUD1-213ENST00000568358 FCHSD2O94868 740 aa6.22□□□□□ -1.41
HERPUD1-213ENST00000568358 SLC39A6Q13433 755 aa6.22□□□□□ -1.41
HERPUD1-213ENST00000568358 ARHGAP27Q6ZUM4 889 aa6.22□□□□□ -1.41
HERPUD1-213ENST00000568358 SCUBE2Q9NQ36 999 aa6.22□□□□□ -1.41
HERPUD1-213ENST00000568358 PIM2Q9P1W9 311 aa6.22□□□□□ -1.41
HERPUD1-213ENST00000568358 MKRN3Q13064 507 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-213ENST00000568358 INTS5Q6P9B9 1019 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-213ENST00000568358 DNAJC10Q8IXB1 793 aa6.21□□□□□ -1.42
HERPUD1-213ENST00000568358 ZNF526Q8TF50 670 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-213ENST00000568358 RTF1Q92541 710 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-213ENST00000568358 ARID3AQ99856 593 aa6.21□□□□□ -1.42
HERPUD1-213ENST00000568358 TRAIPQ9BWF2 469 aa6.21□□□□□ -1.42
HERPUD1-213ENST00000568358 WDR70Q9NW82 654 aa6.21□□□□□ -1.42
HERPUD1-213ENST00000568358 KIF13BQ9NQT8 1826 aa6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 TTLL13PA6NNM8 815 aa6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 NPHP1O15259 732 aa6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 U2AF1L5P0DN76 240 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 CYP19A1P11511 503 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 DPEP1P16444 411 aa6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 CANXP27824 592 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 U2AF1Q01081 240 aaKnown RBP eCLIP6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 DALRD3Q5D0E6 543 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 USPL1Q5W0Q7 1092 aa6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 PNNQ9H307 717 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 SRP68Q9UHB9 627 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 NARFQ9UHQ1 456 aa6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 ZNF330Q9Y3S2 320 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 CICQ96RK0 1608 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 USP42Q9H9J4 1324 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-213ENST00000568358 C4AP0C0L4 1744 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 ATP10DQ9P241 1426 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 GOLGB1Q14789 3259 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 BTBD11A6QL63 1104 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 APBB1O00213 710 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 SEC24BO95487 1268 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 TM4SF1P30408 202 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 PRKAR2BP31323 418 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 IER5LQ5T953 404 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 ZNF790Q6PG37 636 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 C16orf71Q8IYS4 520 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 RGS22Q8NE09 1264 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 FMNL2Q96PY5 1086 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 TRPC6Q9Y210 931 aa6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 SOS1Q07889 1333 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-213ENST00000568358 ARFGEF1Q9Y6D6 1849 aa6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 H0YIN7 160 aa6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 POLRMTO00411 1230 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 SERPINB2P05120 415 aa6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 PPP2R1AP30153 589 aa6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 DCAF8Q5TAQ9 597 aa6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 BICDL1Q6ZP65 573 aa6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 IL17REQ8NFR9 667 aa6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 PDZRN3Q9UPQ7 1066 aa6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 TJP1Q07157 1748 aa6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 COL15A1P39059 1388 aa6.18□□□□□ -1.42
HERPUD1-213ENST00000568358 C10orf71Q711Q0 1435 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 PXDNLA1KZ92 1463 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 A6NJR5 290 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 SEMA3EO15041 775 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 HTATSF1O43719 755 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 KCNA3P22001 575 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 CHRNA5P30532 468 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 PDE6BP35913 854 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 IL6STP40189 918 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 DDR1Q08345 913 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 NFIXQ14938 502 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 TTLL6Q8N841 843 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 ZNF496Q96IT1 587 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 SETDB2Q96T68 719 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 KDM4CQ9H3R0 1056 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 TRIM35Q9UPQ4 493 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 ZBTB1Q9Y2K1 713 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 AFDNP55196 1824 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 KDM2BQ8NHM5 1336 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 BRCA1P38398 1863 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 CCDC88AQ3V6T2 1871 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 HEG1Q9ULI3 1381 aa6.17□□□□□ -1.42
HERPUD1-213ENST00000568358 MRC1P22897 1456 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 SBF1O95248 1867 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 SNRPA1P09661 255 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 EIF5P55010 431 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 ST5P78524 1137 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 FLIIQ13045 1269 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 TAF7Q15545 349 aaPredicted RBP6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 C9orf131Q5VYM1 1079 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 C2CD5Q86YS7 1000 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 IFNL1Q8IU54 200 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 PNISRQ8TF01 805 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 ZNF622Q969S3 477 aaKnown RBP eCLIP6.16□□□□□ -1.422e-6■■□□□ 11.7
HERPUD1-213ENST00000568358 PHACTR3Q96KR7 559 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 RNF181Q9P0P0 153 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 TBC1D2BQ9UPU7 963 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 ZNF652Q9Y2D9 606 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 UBR2Q8IWV8 1755 aa6.16□□□□□ -1.42
HERPUD1-213ENST00000568358 KCPQ6ZWJ8 1503 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms