RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, humanhuman

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-208ENST00000567947 SHISA8B8ZZ34 492 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L15C9J2P7 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L10C9JJH3 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L13C9JLJ4 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L12C9JPN9 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L11C9JVI0 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L21D6R901 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L18D6R9N7 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L22D6RA61 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L17D6RBQ6 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L19D6RCP7 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L20D6RJB6 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 USP17L24Q0WX57 530 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 NEDD1Q8NHV4 660 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 CHMP3Q9Y3E7 222 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 GJA3Q9Y6H8 435 aa8.71□□□□□ -1.02
CBFB-208ENST00000567947 KHNYNO15037 678 aaKnown RBP8.7□□□□□ -1.02
CBFB-208ENST00000567947 GDF11O95390 407 aa8.7□□□□□ -1.02
CBFB-208ENST00000567947 LMOD1P29536 600 aaPredicted RBP8.7□□□□□ -1.02
CBFB-208ENST00000567947 IRS1P35568 1242 aa8.7□□□□□ -1.02
CBFB-208ENST00000567947 GALNT6Q8NCL4 622 aa8.7□□□□□ -1.02
CBFB-208ENST00000567947 EDARADDQ8WWZ3 215 aa8.7□□□□□ -1.02
CBFB-208ENST00000567947 C2orf49Q9BVC5 232 aaPredicted RBP8.7□□□□□ -1.02
CBFB-208ENST00000567947 VRTNQ9H8Y1 702 aa8.7□□□□□ -1.02
CBFB-208ENST00000567947 GGA1Q9UJY5 639 aa8.7□□□□□ -1.02
CBFB-208ENST00000567947 PHF20L1A8MW92 1017 aa8.69□□□□□ -1.02
CBFB-208ENST00000567947 EPXP11678 715 aa8.69□□□□□ -1.02
CBFB-208ENST00000567947 CD33P20138 364 aa8.69□□□□□ -1.02
CBFB-208ENST00000567947 DPYDQ12882 1025 aa8.69□□□□□ -1.02
CBFB-208ENST00000567947 PODNQ7Z5L7 613 aa8.69□□□□□ -1.02
CBFB-208ENST00000567947 ANKMY2Q8IV38 441 aa8.69□□□□□ -1.02
CBFB-208ENST00000567947 BEND7Q8N7W2 519 aaPredicted RBP8.69□□□□□ -1.02
CBFB-208ENST00000567947 ARXQ96QS3 562 aa8.69□□□□□ -1.02
CBFB-208ENST00000567947 PHACTR1Q9C0D0 580 aa8.69□□□□□ -1.02
CBFB-208ENST00000567947 ZNF777Q9ULD5 760 aaPredicted RBP8.69□□□□□ -1.02
CBFB-208ENST00000567947 DNMT3AQ9Y6K1 912 aaPredicted RBP8.69□□□□□ -1.02
CBFB-208ENST00000567947 ATAD2Q6PL18 1390 aa8.69□□□□□ -1.02
CBFB-208ENST00000567947 PPP1R12BO60237 982 aaPredicted RBP8.68□□□□□ -1.02
CBFB-208ENST00000567947 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
CBFB-208ENST00000567947 ADH6P28332 368 aa8.68□□□□□ -1.02
CBFB-208ENST00000567947 ZNF468Q5VIY5 522 aaPredicted RBP8.68□□□□□ -1.02
CBFB-208ENST00000567947 RHPN1Q8TCX5 695 aa8.68□□□□□ -1.02
CBFB-208ENST00000567947 STRN4Q9NRL3 753 aa8.68□□□□□ -1.02
CBFB-208ENST00000567947 MARK1Q9P0L2 795 aa8.68□□□□□ -1.02
CBFB-208ENST00000567947 KLF15Q9UIH9 416 aa8.68□□□□□ -1.02
CBFB-208ENST00000567947 CNTNAP5Q8WYK1 1306 aa8.68□□□□□ -1.02
CBFB-208ENST00000567947 IGFBP4P22692 258 aa8.67□□□□□ -1.02
CBFB-208ENST00000567947 LRRC69Q6ZNQ3 347 aa8.67□□□□□ -1.02
CBFB-208ENST00000567947 SCG3Q8WXD2 468 aaKnown RBP8.66□□□□□ -1.02
CBFB-208ENST00000567947 MDFIQ99750 246 aa8.66□□□□□ -1.02
CBFB-208ENST00000567947 ANKIB1Q9P2G1 1089 aa8.66□□□□□ -1.02
CBFB-208ENST00000567947 NEURL1BA8MQ27 555 aa8.65□□□□□ -1.02
CBFB-208ENST00000567947 KCNQ4P56696 695 aa8.65□□□□□ -1.02
CBFB-208ENST00000567947 SNRPNP63162 240 aaKnown RBP8.65□□□□□ -1.02
CBFB-208ENST00000567947 FCHSD1Q86WN1 690 aa8.65□□□□□ -1.02
CBFB-208ENST00000567947 ALDH16A1Q8IZ83 802 aa8.65□□□□□ -1.02
CBFB-208ENST00000567947 HCN4Q9Y3Q4 1203 aa8.65□□□□□ -1.02
CBFB-208ENST00000567947 BICRAQ9NZM4 1560 aa8.65□□□□□ -1.03
CBFB-208ENST00000567947 TYRO3Q06418 890 aa8.64□□□□□ -1.03
CBFB-208ENST00000567947 HIF1AQ16665 826 aa8.64□□□□□ -1.03
CBFB-208ENST00000567947 KCTD17Q8N5Z5 321 aa8.64□□□□□ -1.03
CBFB-208ENST00000567947 SUSD3Q96L08 255 aa8.64□□□□□ -1.03
CBFB-208ENST00000567947 MKL2Q9ULH7 1088 aa8.64□□□□□ -1.03
CBFB-208ENST00000567947 WEE1P30291 646 aa8.63□□□□□ -1.03
CBFB-208ENST00000567947 DGKGP49619 791 aa8.63□□□□□ -1.03
CBFB-208ENST00000567947 HSH2DQ96JZ2 352 aa8.63□□□□□ -1.03
CBFB-208ENST00000567947 BTBD6Q96KE9 485 aa8.63□□□□□ -1.03
CBFB-208ENST00000567947 NEUROD4Q9HD90 331 aa8.63□□□□□ -1.03
CBFB-208ENST00000567947 RTN1Q16799 776 aa8.62□□□□□ -1.03
CBFB-208ENST00000567947 IER5Q5VY09 327 aa8.62□□□□□ -1.03
CBFB-208ENST00000567947 LINC00114Q6XXX2 140 aa8.62□□□□□ -1.03
CBFB-208ENST00000567947 ALYREFQ86V81 257 aaKnown RBP8.62□□□□□ -1.03
CBFB-208ENST00000567947 DCAF5Q96JK2 942 aa8.62□□□□□ -1.03
CBFB-208ENST00000567947 HINFPQ9BQA5 517 aa8.62□□□□□ -1.03
CBFB-208ENST00000567947 ZMYND15Q9H091 742 aa8.62□□□□□ -1.03
CBFB-208ENST00000567947 FOXO3O43524 673 aa8.61□□□□□ -1.03
CBFB-208ENST00000567947 SIN3BO75182 1162 aa8.61□□□□□ -1.03
CBFB-208ENST00000567947 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
CBFB-208ENST00000567947 SFSWAPQ12872 951 aaKnown RBP8.61□□□□□ -1.03
CBFB-208ENST00000567947 ELOAQ14241 798 aaKnown RBP8.61□□□□□ -1.03
CBFB-208ENST00000567947 ZNF280CQ8ND82 737 aa8.61□□□□□ -1.03
CBFB-208ENST00000567947 BRD7Q9NPI1 651 aa8.61□□□□□ -1.03
CBFB-208ENST00000567947 PRR12Q9ULL5 1215 aa8.61□□□□□ -1.03
CBFB-208ENST00000567947 ADARB2-AS1A8MUL3 147 aa8.6□□□□□ -1.03
CBFB-208ENST00000567947 IGHA1P01876 353 aa8.6□□□□□ -1.03
CBFB-208ENST00000567947 PCBP4P57723 403 aaKnown RBP8.6□□□□□ -1.03
CBFB-208ENST00000567947 CHSY3Q70JA7 882 aa8.6□□□□□ -1.03
CBFB-208ENST00000567947 PIK3R2O00459 728 aa8.59□□□□□ -1.03
CBFB-208ENST00000567947 AMPD1P23109 780 aa8.59□□□□□ -1.03
CBFB-208ENST00000567947 GRIN2CQ14957 1233 aa8.59□□□□□ -1.03
CBFB-208ENST00000567947 BTLAQ7Z6A9 289 aa8.59□□□□□ -1.03
CBFB-208ENST00000567947 SYT9Q86SS6 491 aa8.59□□□□□ -1.03
CBFB-208ENST00000567947 FAM200AQ8TCP9 573 aa8.59□□□□□ -1.03
CBFB-208ENST00000567947 CHMP7Q8WUX9 453 aaPredicted RBP8.59□□□□□ -1.03
CBFB-208ENST00000567947 TNFRSF25Q93038 417 aa8.59□□□□□ -1.03
CBFB-208ENST00000567947 CEP63Q96MT8 703 aa8.59□□□□□ -1.03
CBFB-208ENST00000567947 SLC30A3Q99726 388 aa8.59□□□□□ -1.03
CBFB-208ENST00000567947 ELOA3CA0A087WX78 387 aaPredicted RBP8.58□□□□□ -1.04
CBFB-208ENST00000567947 ELOA3DA6NLF2 546 aaPredicted RBP8.58□□□□□ -1.04
CBFB-208ENST00000567947 TGFBR3LH3BV60 316 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms