RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
TCF4-236ENST00000567880 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
TCF4-236ENST00000567880 CCT4P50991 539 aaKnown RBP13.18□□□□□ -0.3
TCF4-236ENST00000567880 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
TCF4-236ENST00000567880 DNAAF4Q8WXU2 420 aa13.18□□□□□ -0.3
TCF4-236ENST00000567880 MAP3K2Q9Y2U5 619 aa13.18□□□□□ -0.3
TCF4-236ENST00000567880 PXDNLA1KZ92 1463 aa13.18□□□□□ -0.3
TCF4-236ENST00000567880 COL5A3P25940 1745 aaPredicted RBP13.17□□□□□ -0.3
TCF4-236ENST00000567880 AAMPQ13685 434 aa13.17□□□□□ -0.3
TCF4-236ENST00000567880 KSR2Q6VAB6 950 aa13.17□□□□□ -0.3
TCF4-236ENST00000567880 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
TCF4-236ENST00000567880 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
TCF4-236ENST00000567880 FAM196AQ6ZSG2 479 aa13.17□□□□□ -0.3
TCF4-236ENST00000567880 RIC3Q7Z5B4 369 aa13.17□□□□□ -0.3
TCF4-236ENST00000567880 CHMP4BQ9H444 224 aaKnown RBP13.17□□□□□ -0.3
TCF4-236ENST00000567880 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
TCF4-236ENST00000567880 ZBTB40Q9NUA8 1239 aa13.17□□□□□ -0.3
TCF4-236ENST00000567880 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
TCF4-236ENST00000567880 LY75O60449 1722 aa13.16□□□□□ -0.3
TCF4-236ENST00000567880 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
TCF4-236ENST00000567880 KCNQ4P56696 695 aa13.16□□□□□ -0.3
TCF4-236ENST00000567880 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
TCF4-236ENST00000567880 ZNF831Q5JPB2 1677 aa13.16□□□□□ -0.3
TCF4-236ENST00000567880 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
TCF4-236ENST00000567880 ANKRD13DQ6ZTN6 518 aa13.15□□□□□ -0.3
TCF4-236ENST00000567880 MEIS3Q99687 375 aa13.15□□□□□ -0.3
TCF4-236ENST00000567880 SRCIN1Q9C0H9 1055 aa13.15□□□□□ -0.3
TCF4-236ENST00000567880 TRIM37O94972 964 aa13.15□□□□□ -0.3
TCF4-236ENST00000567880 ITPK1Q13572 414 aa13.15□□□□□ -0.3
TCF4-236ENST00000567880 ZBTB1Q9Y2K1 713 aa13.15□□□□□ -0.3
TCF4-236ENST00000567880 BEND3Q5T5X7 828 aa13.14□□□□□ -0.31
TCF4-236ENST00000567880 TTLL7Q6ZT98 887 aa13.14□□□□□ -0.31
TCF4-236ENST00000567880 BCL11BQ9C0K0 894 aaPredicted RBP13.14□□□□□ -0.31
TCF4-236ENST00000567880 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
TCF4-236ENST00000567880 CRKLP46109 303 aaKnown RBP13.13□□□□□ -0.31
TCF4-236ENST00000567880 ZBTB3Q9H5J0 574 aa13.13□□□□□ -0.31
TCF4-236ENST00000567880 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
TCF4-236ENST00000567880 IGHDP01880 384 aa13.13□□□□□ -0.31
TCF4-236ENST00000567880 NEXNQ0ZGT2 675 aa13.13□□□□□ -0.31
TCF4-236ENST00000567880 CWF19L2Q2TBE0 894 aaKnown RBP13.13□□□□□ -0.31
TCF4-236ENST00000567880 PLBD2Q8NHP8 589 aa13.13□□□□□ -0.31
TCF4-236ENST00000567880 MYD88Q99836 296 aa13.13□□□□□ -0.31
TCF4-236ENST00000567880 CCDC87Q9NVE4 849 aa13.13□□□□□ -0.31
TCF4-236ENST00000567880 CCNL1Q9UK58 526 aaPredicted RBP13.13□□□□□ -0.31
TCF4-236ENST00000567880 RREB1Q92766 1687 aa13.12□□□□□ -0.31
TCF4-236ENST00000567880 NUP98P52948 1817 aa13.12□□□□□ -0.31
TCF4-236ENST00000567880 ECM2O94769 699 aaPredicted RBP13.12□□□□□ -0.31
TCF4-236ENST00000567880 INTS5Q6P9B9 1019 aaKnown RBP13.11□□□□□ -0.31
TCF4-236ENST00000567880 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
TCF4-236ENST00000567880 LINS1Q8NG48 757 aa13.11□□□□□ -0.31
TCF4-236ENST00000567880 METTL22Q9BUU2 404 aaPredicted RBP13.11□□□□□ -0.31
TCF4-236ENST00000567880 KIF6Q6ZMV9 814 aa13.11□□□□□ -0.31
TCF4-236ENST00000567880 CENPQQ7L2Z9 268 aaPredicted RBP13.11□□□□□ -0.31
TCF4-236ENST00000567880 USP44Q9H0E7 712 aa13.11□□□□□ -0.31
TCF4-236ENST00000567880 KDM2BQ8NHM5 1336 aa13.1□□□□□ -0.31
TCF4-236ENST00000567880 GNAI3P08754 354 aa13.1□□□□□ -0.31
TCF4-236ENST00000567880 UBTFL1P0CB47 393 aaPredicted RBP13.1□□□□□ -0.31
TCF4-236ENST00000567880 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
TCF4-236ENST00000567880 BCL11AQ9H165 835 aa13.1□□□□□ -0.31
TCF4-236ENST00000567880 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
TCF4-236ENST00000567880 ANKRD36CQ5JPF3 1778 aa13.1□□□□□ -0.31
TCF4-236ENST00000567880 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
TCF4-236ENST00000567880 ALDH1L1O75891 902 aa13.09□□□□□ -0.31
TCF4-236ENST00000567880 IGKV5-2P06315 115 aa13.09□□□□□ -0.31
TCF4-236ENST00000567880 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
TCF4-236ENST00000567880 C9orf78Q9NZ63 289 aaPredicted RBP13.09□□□□□ -0.31
TCF4-236ENST00000567880 GNAI2P04899 355 aa13.09□□□□□ -0.31
TCF4-236ENST00000567880 NBPF7P0C2Y1 421 aaPredicted RBP13.09□□□□□ -0.31
TCF4-236ENST00000567880 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
TCF4-236ENST00000567880 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
TCF4-236ENST00000567880 NEURL1BA8MQ27 555 aa13.08□□□□□ -0.32
TCF4-236ENST00000567880 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
TCF4-236ENST00000567880 C4BP0C0L5 1744 aa13.08□□□□□ -0.32
TCF4-236ENST00000567880 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.32
TCF4-236ENST00000567880 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
TCF4-236ENST00000567880 RGL2O15211 777 aa13.07□□□□□ -0.32
TCF4-236ENST00000567880 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
TCF4-236ENST00000567880 HDAC1Q13547 482 aaPredicted RBP13.07□□□□□ -0.32
TCF4-236ENST00000567880 GRM8O00222 908 aa13.07□□□□□ -0.32
TCF4-236ENST00000567880 CEP85Q6P2H3 762 aa13.07□□□□□ -0.32
TCF4-236ENST00000567880 SIRT2Q8IXJ6 389 aa13.07□□□□□ -0.32
TCF4-236ENST00000567880 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
TCF4-236ENST00000567880 COL15A1P39059 1388 aa13.06□□□□□ -0.32
TCF4-236ENST00000567880 APBA3O96018 575 aa13.06□□□□□ -0.32
TCF4-236ENST00000567880 GCKRQ14397 625 aa13.06□□□□□ -0.32
TCF4-236ENST00000567880 HLFQ16534 295 aa13.06□□□□□ -0.32
TCF4-236ENST00000567880 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
TCF4-236ENST00000567880 LRRC4BQ9NT99 713 aa13.06□□□□□ -0.32
TCF4-236ENST00000567880 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
TCF4-236ENST00000567880 BCORQ6W2J9 1755 aa13.06□□□□□ -0.32
TCF4-236ENST00000567880 GNPATO15228 680 aa13.05□□□□□ -0.32
TCF4-236ENST00000567880 SMIM5Q71RC9 77 aa13.05□□□□□ -0.32
TCF4-236ENST00000567880 RPAP2Q8IXW5 612 aaPredicted RBP13.05□□□□□ -0.32
TCF4-236ENST00000567880 ANKRD44Q8N8A2 993 aa13.05□□□□□ -0.32
TCF4-236ENST00000567880 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
TCF4-236ENST00000567880 TCIRG1Q13488 830 aa13.05□□□□□ -0.32
TCF4-236ENST00000567880 GIGYF2Q6Y7W6 1299 aaKnown RBP13.05□□□□□ -0.32
TCF4-236ENST00000567880 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
TCF4-236ENST00000567880 A0A087WZG4 1122 aa13.04□□□□□ -0.32
TCF4-236ENST00000567880 GPTP24298 496 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms