RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 CNKSR1Q969H4 720 aa21.79■■□□□ 1.08
EDC3-212ENST00000566828 FMNL2Q96PY5 1086 aa21.79■■□□□ 1.08
EDC3-212ENST00000566828 SETDB2Q96T68 719 aa21.79■■□□□ 1.08
EDC3-212ENST00000566828 TEX13AQ9BXU3 409 aaPredicted RBP21.79■■□□□ 1.08
EDC3-212ENST00000566828 ADAMTSL1Q8N6G6 1762 aa21.79■■□□□ 1.08
EDC3-212ENST00000566828 CEMIPQ8WUJ3 1361 aa21.78■■□□□ 1.08
EDC3-212ENST00000566828 SRGNP10124 158 aa21.78■■□□□ 1.08
EDC3-212ENST00000566828 CNGB1Q14028 1251 aaPredicted RBP21.78■■□□□ 1.08
EDC3-212ENST00000566828 STYK1Q6J9G0 422 aa21.78■■□□□ 1.08
EDC3-212ENST00000566828 NPM2Q86SE8 214 aaKnown RBP21.78■■□□□ 1.08
EDC3-212ENST00000566828 LAMB4A4D0S4 1761 aa21.78■■□□□ 1.08
EDC3-212ENST00000566828 PIP4K2AP48426 406 aaPredicted RBP21.77■■□□□ 1.08
EDC3-212ENST00000566828 DZIP3Q86Y13 1208 aaKnown RBP21.77■■□□□ 1.08
EDC3-212ENST00000566828 PER1O15534 1290 aaPredicted RBP21.76■■□□□ 1.07
EDC3-212ENST00000566828 KCNQ3O43525 872 aa21.76■■□□□ 1.07
EDC3-212ENST00000566828 MASTLQ96GX5 879 aa21.76■■□□□ 1.07
EDC3-212ENST00000566828 CNTNAP1P78357 1384 aa21.75■■□□□ 1.07
EDC3-212ENST00000566828 SOGA3Q5TF21 947 aa21.75■■□□□ 1.07
EDC3-212ENST00000566828 IQCA1LA6NCM1 817 aa21.73■■□□□ 1.07
EDC3-212ENST00000566828 BTBD11A6QL63 1104 aa21.73■■□□□ 1.07
EDC3-212ENST00000566828 PASKQ96RG2 1323 aa21.73■■□□□ 1.07
EDC3-212ENST00000566828 ZNF541Q9H0D2 1346 aa21.73■■□□□ 1.07
EDC3-212ENST00000566828 PRAMEF22A3QJZ6 481 aa21.72■■□□□ 1.07
EDC3-212ENST00000566828 FOXN1O15353 648 aa21.72■■□□□ 1.07
EDC3-212ENST00000566828 CCDC93Q567U6 631 aa21.72■■□□□ 1.07
EDC3-212ENST00000566828 LDHDQ86WU2 507 aa21.72■■□□□ 1.07
EDC3-212ENST00000566828 NBPF5PQ86XG9 351 aaPredicted RBP21.72■■□□□ 1.07
EDC3-212ENST00000566828 L3MBTL3Q96JM7 780 aaPredicted RBP21.72■■□□□ 1.07
EDC3-212ENST00000566828 TAF1DQ9H5J8 278 aaPredicted RBP21.71■■□□□ 1.07
EDC3-212ENST00000566828 USP16Q9Y5T5 823 aa21.71■■□□□ 1.07
EDC3-212ENST00000566828 PRKAR2BP31323 418 aa21.7■■□□□ 1.06
EDC3-212ENST00000566828 CCER1Q8TC90 406 aaPredicted RBP21.7■■□□□ 1.06
EDC3-212ENST00000566828 NPC1L1Q9UHC9 1359 aa21.7■■□□□ 1.06
EDC3-212ENST00000566828 EAPPQ56P03 285 aaPredicted RBP21.69■■□□□ 1.06
EDC3-212ENST00000566828 OLFM4Q6UX06 510 aa21.69■■□□□ 1.06
EDC3-212ENST00000566828 C7orf43Q8WVR3 580 aa21.69■■□□□ 1.06
EDC3-212ENST00000566828 PHACTR3Q96KR7 559 aa21.69■■□□□ 1.06
EDC3-212ENST00000566828 ZNF277Q9NRM2 450 aaPredicted RBP21.69■■□□□ 1.06
EDC3-212ENST00000566828 NPR1P16066 1061 aa21.68■■□□□ 1.06
EDC3-212ENST00000566828 FKBP4Q02790 459 aaKnown RBP eCLIP21.68■■□□□ 1.06
EDC3-212ENST00000566828 RSPH6AQ9H0K4 717 aa21.68■■□□□ 1.06
EDC3-212ENST00000566828 ZNF652Q9Y2D9 606 aa21.68■■□□□ 1.06
EDC3-212ENST00000566828 NUP98P52948 1817 aa21.67■■□□□ 1.06
EDC3-212ENST00000566828 DLG5Q8TDM6 1919 aa21.67■■□□□ 1.06
EDC3-212ENST00000566828 KDM3BQ7LBC6 1761 aa21.66■■□□□ 1.06
EDC3-212ENST00000566828 LTBP1Q14766 1721 aa21.66■■□□□ 1.06
EDC3-212ENST00000566828 RNF123Q5XPI4 1314 aa21.66■■□□□ 1.06
EDC3-212ENST00000566828 FAM177BA6PVY3 158 aa21.66■■□□□ 1.06
EDC3-212ENST00000566828 CLEC4GQ6UXB4 293 aa21.66■■□□□ 1.06
EDC3-212ENST00000566828 NIP7Q9Y221 180 aaKnown RBP eCLIP21.66■■□□□ 1.06
EDC3-212ENST00000566828 TMEM88BA6NKF7 163 aa21.65■■□□□ 1.06
EDC3-212ENST00000566828 VEGFBP49765 207 aa21.65■■□□□ 1.06
EDC3-212ENST00000566828 HACL1Q9UJ83 578 aa21.65■■□□□ 1.06
EDC3-212ENST00000566828 COL4A5P29400 1685 aa21.65■■□□□ 1.06
EDC3-212ENST00000566828 THSD7BQ9C0I4 1608 aa21.65■■□□□ 1.06
EDC3-212ENST00000566828 ITGBL1O95965 494 aaPredicted RBP21.64■■□□□ 1.05
EDC3-212ENST00000566828 MCM10Q7L590 875 aa21.64■■□□□ 1.05
EDC3-212ENST00000566828 AIDAQ96BJ3 306 aa21.64■■□□□ 1.05
EDC3-212ENST00000566828 CLEC11AQ9Y240 323 aa21.64■■□□□ 1.05
EDC3-212ENST00000566828 SNED1Q8TER0 1413 aa21.63■■□□□ 1.05
EDC3-212ENST00000566828 ABCC12Q96J65 1359 aa21.63■■□□□ 1.05
EDC3-212ENST00000566828 NBPF26B4DH59 902 aa21.63■■□□□ 1.05
EDC3-212ENST00000566828 SNRPA1P09661 255 aaKnown RBP21.63■■□□□ 1.05
EDC3-212ENST00000566828 EPHX2P34913 555 aa21.63■■□□□ 1.05
EDC3-212ENST00000566828 NBPF10Q6P3W6 841 aaKnown RBP21.63■■□□□ 1.05
EDC3-212ENST00000566828 NBPF15Q8N660 670 aa21.63■■□□□ 1.05
EDC3-212ENST00000566828 PRDM10Q9NQV6 1147 aa21.63■■□□□ 1.05
EDC3-212ENST00000566828 KLRG2A4D1S0 409 aaPredicted RBP21.62■■□□□ 1.05
EDC3-212ENST00000566828 CTCFP49711 727 aaPredicted RBP21.62■■□□□ 1.05
EDC3-212ENST00000566828 TPTE2Q6XPS3 522 aa21.62■■□□□ 1.05
EDC3-212ENST00000566828 IARSP41252 1262 aaKnown RBP21.61■■□□□ 1.05
EDC3-212ENST00000566828 RTKN2Q8IZC4 609 aa21.61■■□□□ 1.05
EDC3-212ENST00000566828 RTF1Q92541 710 aaKnown RBP21.61■■□□□ 1.05
EDC3-212ENST00000566828 CFAP53Q96M91 514 aa21.61■■□□□ 1.05
EDC3-212ENST00000566828 TRPM7Q96QT4 1865 aa21.6■■□□□ 1.05
EDC3-212ENST00000566828 DCTN1Q14203 1278 aa21.6■■□□□ 1.05
EDC3-212ENST00000566828 MAP1SQ66K74 1059 aaPredicted RBP21.6■■□□□ 1.05
EDC3-212ENST00000566828 FZD9O00144 591 aa21.59■■□□□ 1.05
EDC3-212ENST00000566828 HLFQ16534 295 aa21.59■■□□□ 1.05
EDC3-212ENST00000566828 LBX1P52954 281 aa21.58■■□□□ 1.05
EDC3-212ENST00000566828 PNMA8AQ86V59 439 aaPredicted RBP21.58■■□□□ 1.05
EDC3-212ENST00000566828 SYNE4Q8N205 404 aa21.58■■□□□ 1.05
EDC3-212ENST00000566828 WBP1LQ9NX94 342 aa21.58■■□□□ 1.05
EDC3-212ENST00000566828 RGL2O15211 777 aa21.57■■□□□ 1.04
EDC3-212ENST00000566828 U2AF1L5P0DN76 240 aaPredicted RBP21.57■■□□□ 1.04
EDC3-212ENST00000566828 GTF2E1P29083 439 aaPredicted RBP21.57■■□□□ 1.04
EDC3-212ENST00000566828 U2AF1Q01081 240 aaKnown RBP eCLIP21.57■■□□□ 1.04
EDC3-212ENST00000566828 CNTROBQ8N137 903 aa21.57■■□□□ 1.04
EDC3-212ENST00000566828 GPC2Q8N158 579 aa21.57■■□□□ 1.04
EDC3-212ENST00000566828 RASSF10A6NK89 507 aa21.56■■□□□ 1.04
EDC3-212ENST00000566828 NUTM1Q86Y26 1132 aa21.56■■□□□ 1.04
EDC3-212ENST00000566828 ALDH1B1P30837 517 aa21.55■■□□□ 1.04
EDC3-212ENST00000566828 ABT1Q9ULW3 272 aaKnown RBP21.55■■□□□ 1.04
EDC3-212ENST00000566828 NUDCQ9Y266 331 aa21.55■■□□□ 1.04
EDC3-212ENST00000566828 RIC1Q4ADV7 1423 aa21.55■■□□□ 1.04
EDC3-212ENST00000566828 HSPA8P11142 646 aaKnown RBP21.54■■□□□ 1.04
EDC3-212ENST00000566828 DEFB115Q30KQ5 88 aa21.54■■□□□ 1.04
EDC3-212ENST00000566828 CRY2Q49AN0 593 aa21.54■■□□□ 1.04
EDC3-212ENST00000566828 SLC51AQ86UW1 340 aa21.54■■□□□ 1.04
EDC3-212ENST00000566828 NGEFQ8N5V2 710 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms