RNA–Protein interactions for RNA: ENST00000566661.5

KLHDC4-217, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 2,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-217ENST00000566661 MRC1P22897 1456 aa21.19■□□□□ 0.98
KLHDC4-217ENST00000566661 STRN4Q9NRL3 753 aa21.19■□□□□ 0.98
KLHDC4-217ENST00000566661 CABP4P57796 275 aa21.18■□□□□ 0.98
KLHDC4-217ENST00000566661 NHSL1Q5SYE7 1610 aa21.18■□□□□ 0.98
KLHDC4-217ENST00000566661 MYL6BP14649 208 aa21.17■□□□□ 0.98
KLHDC4-217ENST00000566661 POLA2Q14181 598 aa21.17■□□□□ 0.98
KLHDC4-217ENST00000566661 CWF19L2Q2TBE0 894 aaKnown RBP21.17■□□□□ 0.98
KLHDC4-217ENST00000566661 TTC5Q8N0Z6 440 aa21.17■□□□□ 0.98
KLHDC4-217ENST00000566661 ZGPATQ8N5A5 531 aaKnown RBP21.17■□□□□ 0.98
KLHDC4-217ENST00000566661 ZCRB1Q8TBF4 217 aaKnown RBP21.17■□□□□ 0.98
KLHDC4-217ENST00000566661 TSHZ3Q63HK5 1081 aa21.17■□□□□ 0.98
KLHDC4-217ENST00000566661 USP16Q9Y5T5 823 aa21.17■□□□□ 0.98
KLHDC4-217ENST00000566661 PKP1Q13835 747 aa21.16■□□□□ 0.98
KLHDC4-217ENST00000566661 LARP1Q6PKG0 1096 aaKnown RBP21.16■□□□□ 0.98
KLHDC4-217ENST00000566661 INTS4Q96HW7 963 aaKnown RBP21.16■□□□□ 0.98
KLHDC4-217ENST00000566661 ZDHHC9Q9Y397 364 aa21.16■□□□□ 0.98
KLHDC4-217ENST00000566661 SRGAP3O43295 1099 aa21.16■□□□□ 0.98
KLHDC4-217ENST00000566661 ALDH1L1O75891 902 aa21.16■□□□□ 0.98
KLHDC4-217ENST00000566661 CUL4AQ13619 759 aa21.16■□□□□ 0.98
KLHDC4-217ENST00000566661 ZSCAN23Q3MJ62 389 aa21.16■□□□□ 0.98
KLHDC4-217ENST00000566661 PARP4Q9UKK3 1724 aaKnown RBP21.16■□□□□ 0.98
KLHDC4-217ENST00000566661 ERBB4Q15303 1308 aa21.15■□□□□ 0.98
KLHDC4-217ENST00000566661 CHMLP26374 656 aa21.15■□□□□ 0.98
KLHDC4-217ENST00000566661 NEK4P51957 841 aa21.15■□□□□ 0.98
KLHDC4-217ENST00000566661 CARD10Q9BWT7 1032 aa21.15■□□□□ 0.98
KLHDC4-217ENST00000566661 SURF6O75683 361 aaKnown RBP21.14■□□□□ 0.98
KLHDC4-217ENST00000566661 SNRPA1P09661 255 aaKnown RBP21.14■□□□□ 0.98
KLHDC4-217ENST00000566661 PIP4K2AP48426 406 aaPredicted RBP21.14■□□□□ 0.98
KLHDC4-217ENST00000566661 TMX3Q96JJ7 454 aa21.14■□□□□ 0.98
KLHDC4-217ENST00000566661 C9orf78Q9NZ63 289 aaPredicted RBP21.14■□□□□ 0.98
KLHDC4-217ENST00000566661 PCDH11XQ9BZA7 1347 aa21.14■□□□□ 0.97
KLHDC4-217ENST00000566661 PCDH11YQ9BZA8 1340 aa21.14■□□□□ 0.97
KLHDC4-217ENST00000566661 DDX58O95786 925 aaKnown RBP21.14■□□□□ 0.97
KLHDC4-217ENST00000566661 EVA1CP58658 441 aa21.14■□□□□ 0.97
KLHDC4-217ENST00000566661 CAVIN1Q6NZI2 390 aaKnown RBP21.14■□□□□ 0.97
KLHDC4-217ENST00000566661 RAB11FIP3O75154 756 aa21.13■□□□□ 0.97
KLHDC4-217ENST00000566661 IL2RBP14784 551 aa21.13■□□□□ 0.97
KLHDC4-217ENST00000566661 FMNL2Q96PY5 1086 aa21.13■□□□□ 0.97
KLHDC4-217ENST00000566661 IL1RAPL2Q9NP60 686 aa21.13■□□□□ 0.97
KLHDC4-217ENST00000566661 HS1BP3Q53T59 392 aa21.13■□□□□ 0.97
KLHDC4-217ENST00000566661 XAGE3Q8WTP9 111 aa21.13■□□□□ 0.97
KLHDC4-217ENST00000566661 COPS6Q7L5N1 327 aa21.12■□□□□ 0.97
KLHDC4-217ENST00000566661 RIC3Q7Z5B4 369 aa21.12■□□□□ 0.97
KLHDC4-217ENST00000566661 LINS1Q8NG48 757 aa21.12■□□□□ 0.97
KLHDC4-217ENST00000566661 MBD3O95983 291 aa21.12■□□□□ 0.97
KLHDC4-217ENST00000566661 DDX54Q8TDD1 881 aaKnown RBP21.12■□□□□ 0.97
KLHDC4-217ENST00000566661 NAP1L5Q96NT1 182 aaPredicted RBP21.12■□□□□ 0.97
KLHDC4-217ENST00000566661 PRPF40AO75400 957 aaKnown RBP21.11■□□□□ 0.97
KLHDC4-217ENST00000566661 BRD1O95696 1058 aa21.1■□□□□ 0.97
KLHDC4-217ENST00000566661 NCLP19338 710 aaKnown RBP21.1■□□□□ 0.97
KLHDC4-217ENST00000566661 LRP10Q7Z4F1 713 aa21.1■□□□□ 0.97
KLHDC4-217ENST00000566661 TRIM6-TRIM34B2RNG4 842 aa21.1■□□□□ 0.97
KLHDC4-217ENST00000566661 IGKV5-2P06315 115 aa21.1■□□□□ 0.97
KLHDC4-217ENST00000566661 ZSCAN30Q86W11 494 aa21.1■□□□□ 0.97
KLHDC4-217ENST00000566661 RHPN1Q8TCX5 695 aa21.09■□□□□ 0.97
KLHDC4-217ENST00000566661 GPT2Q8TD30 523 aa21.09■□□□□ 0.97
KLHDC4-217ENST00000566661 ANO2Q9NQ90 1003 aa21.09■□□□□ 0.97
KLHDC4-217ENST00000566661 NUTM1Q86Y26 1132 aa21.09■□□□□ 0.97
KLHDC4-217ENST00000566661 RILPL2Q969X0 211 aa21.09■□□□□ 0.97
KLHDC4-217ENST00000566661 GLI3P10071 1580 aa21.08■□□□□ 0.97
KLHDC4-217ENST00000566661 GRM8O00222 908 aa21.08■□□□□ 0.97
KLHDC4-217ENST00000566661 MTX1Q13505 466 aa21.08■□□□□ 0.97
KLHDC4-217ENST00000566661 NKX1-1Q15270 411 aaPredicted RBP21.08■□□□□ 0.96
KLHDC4-217ENST00000566661 SUCLG2Q96I99 432 aa21.08■□□□□ 0.96
KLHDC4-217ENST00000566661 SHANK3Q9BYB0 1731 aa21.07■□□□□ 0.96
KLHDC4-217ENST00000566661 ERVV-2B6SEH9 535 aa21.07■□□□□ 0.96
KLHDC4-217ENST00000566661 KAZALD1Q96I82 304 aa21.07■□□□□ 0.96
KLHDC4-217ENST00000566661 PALD1Q9ULE6 856 aa21.07■□□□□ 0.96
KLHDC4-217ENST00000566661 PDLIM2Q96JY6 352 aa21.06■□□□□ 0.96
KLHDC4-217ENST00000566661 MYD88Q99836 296 aa21.06■□□□□ 0.96
KLHDC4-217ENST00000566661 BTG4Q9NY30 223 aa21.06■□□□□ 0.96
KLHDC4-217ENST00000566661 UTYO14607 1347 aa21.06■□□□□ 0.96
KLHDC4-217ENST00000566661 LRSAM1Q6UWE0 723 aa21.06■□□□□ 0.96
KLHDC4-217ENST00000566661 ANKRD13DQ6ZTN6 518 aa21.06■□□□□ 0.96
KLHDC4-217ENST00000566661 KIF1BPQ96EK5 621 aa21.06■□□□□ 0.96
KLHDC4-217ENST00000566661 METTL22Q9BUU2 404 aaPredicted RBP21.06■□□□□ 0.96
KLHDC4-217ENST00000566661 NEURL1BA8MQ27 555 aa21.05■□□□□ 0.96
KLHDC4-217ENST00000566661 HSPA4P34932 840 aa21.05■□□□□ 0.96
KLHDC4-217ENST00000566661 NEXNQ0ZGT2 675 aa21.05■□□□□ 0.96
KLHDC4-217ENST00000566661 PA2G4Q9UQ80 394 aaKnown RBP21.05■□□□□ 0.96
KLHDC4-217ENST00000566661 RBSNQ9H1K0 784 aa21.04■□□□□ 0.96
KLHDC4-217ENST00000566661 BICC1Q9H694 974 aaKnown RBP21.04■□□□□ 0.96
KLHDC4-217ENST00000566661 PRIM1P49642 420 aaKnown RBP21.04■□□□□ 0.96
KLHDC4-217ENST00000566661 HSP90AB4PQ58FF6 505 aa21.04■□□□□ 0.96
KLHDC4-217ENST00000566661 UNC5CLQ8IV45 518 aa21.04■□□□□ 0.96
KLHDC4-217ENST00000566661 HDAC5Q9UQL6 1122 aa21.04■□□□□ 0.96
KLHDC4-217ENST00000566661 OS9Q13438 667 aaPredicted RBP21.03■□□□□ 0.96
KLHDC4-217ENST00000566661 GCKRQ14397 625 aa21.03■□□□□ 0.96
KLHDC4-217ENST00000566661 ROBO1Q9Y6N7 1651 aa21.03■□□□□ 0.96
KLHDC4-217ENST00000566661 NBPF26B4DH59 902 aa21.02■□□□□ 0.96
KLHDC4-217ENST00000566661 PTCD1O75127 700 aaKnown RBP21.02■□□□□ 0.96
KLHDC4-217ENST00000566661 NBPF14Q5TI25 921 aa21.02■□□□□ 0.96
KLHDC4-217ENST00000566661 NBPF10Q6P3W6 841 aaKnown RBP21.02■□□□□ 0.96
KLHDC4-217ENST00000566661 NBPF15Q8N660 670 aa21.02■□□□□ 0.96
KLHDC4-217ENST00000566661 LAMB4A4D0S4 1761 aa21.02■□□□□ 0.96
KLHDC4-217ENST00000566661 TMEM63CQ9P1W3 806 aa21.02■□□□□ 0.96
KLHDC4-217ENST00000566661 RAD50Q92878 1312 aa21.01■□□□□ 0.95
KLHDC4-217ENST00000566661 USP42Q9H9J4 1324 aaKnown RBP21.01■□□□□ 0.95
KLHDC4-217ENST00000566661 MSNP26038 577 aaKnown RBP21.01■□□□□ 0.95
KLHDC4-217ENST00000566661 PI4K2BQ8TCG2 481 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms