RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 PTF1AQ7RTS3 328 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 AFF2P51816 1311 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 ATP5J2-PTCD1G3V325 749 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 SPRYD3Q8NCJ5 442 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 SNX21Q969T3 373 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 MYD88Q99836 296 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 NRAPQ86VF7 1730 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 TOGARAM1Q9Y4F4 1720 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 C5P01031 1676 aa13.35□□□□□ -0.27
PDXDC1-214ENST00000566633 CDC45O75419 566 aa13.34□□□□□ -0.27
PDXDC1-214ENST00000566633 DDX58O95786 925 aaKnown RBP13.34□□□□□ -0.27
PDXDC1-214ENST00000566633 GNAI3P08754 354 aa13.34□□□□□ -0.27
PDXDC1-214ENST00000566633 KIF2CQ99661 725 aa13.34□□□□□ -0.27
PDXDC1-214ENST00000566633 BCL9O00512 1426 aa13.34□□□□□ -0.27
PDXDC1-214ENST00000566633 IGKV5-2P06315 115 aa13.34□□□□□ -0.27
PDXDC1-214ENST00000566633 TTC22Q5TAA0 569 aa13.34□□□□□ -0.27
PDXDC1-214ENST00000566633 HSCBQ8IWL3 235 aa13.34□□□□□ -0.27
PDXDC1-214ENST00000566633 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.27
PDXDC1-214ENST00000566633 ZBTB3Q9H5J0 574 aa13.33□□□□□ -0.27
PDXDC1-214ENST00000566633 C9orf78Q9NZ63 289 aaPredicted RBP13.33□□□□□ -0.27
PDXDC1-214ENST00000566633 KCPQ6ZWJ8 1503 aa13.33□□□□□ -0.27
PDXDC1-214ENST00000566633 KCNQ4P56696 695 aa13.33□□□□□ -0.28
PDXDC1-214ENST00000566633 EXOC6BQ9Y2D4 811 aa13.33□□□□□ -0.28
PDXDC1-214ENST00000566633 EP400Q96L91 3159 aa13.33□□□□□ -0.28
PDXDC1-214ENST00000566633 OTUD7AQ8TE49 926 aaPredicted RBP13.32□□□□□ -0.28
PDXDC1-214ENST00000566633 HMMRO75330 724 aa13.32□□□□□ -0.28
PDXDC1-214ENST00000566633 GJD4Q96KN9 370 aaPredicted RBP13.31□□□□□ -0.28
PDXDC1-214ENST00000566633 CHMP5Q9NZZ3 219 aa13.31□□□□□ -0.28
PDXDC1-214ENST00000566633 LINS1Q8NG48 757 aa13.31□□□□□ -0.28
PDXDC1-214ENST00000566633 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
PDXDC1-214ENST00000566633 PPP1R42Q7Z4L9 355 aa13.3□□□□□ -0.28
PDXDC1-214ENST00000566633 METTL22Q9BUU2 404 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-214ENST00000566633 GLI3P10071 1580 aa13.3□□□□□ -0.28
PDXDC1-214ENST00000566633 ATP8B2P98198 1209 aa13.3□□□□□ -0.28
PDXDC1-214ENST00000566633 NEXNQ0ZGT2 675 aa13.3□□□□□ -0.28
PDXDC1-214ENST00000566633 NEURL1BA8MQ27 555 aa13.29□□□□□ -0.28
PDXDC1-214ENST00000566633 DDIT3P35638 169 aa13.29□□□□□ -0.28
PDXDC1-214ENST00000566633 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
PDXDC1-214ENST00000566633 ZBTB1Q9Y2K1 713 aa13.29□□□□□ -0.28
PDXDC1-214ENST00000566633 GRM8O00222 908 aa13.29□□□□□ -0.28
PDXDC1-214ENST00000566633 SRGAP3O43295 1099 aa13.29□□□□□ -0.28
PDXDC1-214ENST00000566633 STARD3NLO95772 234 aa13.29□□□□□ -0.28
PDXDC1-214ENST00000566633 ATP6V1AP38606 617 aa13.29□□□□□ -0.28
PDXDC1-214ENST00000566633 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
PDXDC1-214ENST00000566633 CYP19A1P11511 503 aaPredicted RBP13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 SDSP20132 328 aa13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 SUCLG2Q96I99 432 aa13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 NWD2Q9ULI1 1742 aa13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 PXDNLA1KZ92 1463 aa13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 ALDH1L1O75891 902 aa13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 GCKRQ14397 625 aa13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 KAZALD1Q96I82 304 aa13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 OSBPL3Q9H4L5 887 aa13.28□□□□□ -0.28
PDXDC1-214ENST00000566633 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 SIK1P57059 783 aa13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 SEPT12Q8IYM1 358 aa13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 CD2BP2O95400 341 aaKnown RBP13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 MCM4P33991 863 aa13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 ITPK1Q13572 414 aa13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 SMIM5Q71RC9 77 aa13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 UBE3BQ7Z3V4 1068 aa13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 USP26Q9BXU7 913 aa13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 BICC1Q9H694 974 aaKnown RBP13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 TBC1D2BQ9UPU7 963 aa13.27□□□□□ -0.29
PDXDC1-214ENST00000566633 A0A087WZG4 1122 aa13.26□□□□□ -0.29
PDXDC1-214ENST00000566633 SURF6O75683 361 aaKnown RBP13.26□□□□□ -0.29
PDXDC1-214ENST00000566633 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
PDXDC1-214ENST00000566633 PA2G4Q9UQ80 394 aaKnown RBP13.26□□□□□ -0.29
PDXDC1-214ENST00000566633 ITGB4P16144 1822 aa13.26□□□□□ -0.29
PDXDC1-214ENST00000566633 ERBB4Q15303 1308 aa13.26□□□□□ -0.29
PDXDC1-214ENST00000566633 PDE1AP54750 535 aa13.26□□□□□ -0.29
PDXDC1-214ENST00000566633 HLFQ16534 295 aa13.26□□□□□ -0.29
PDXDC1-214ENST00000566633 IL1RAPL2Q9NP60 686 aa13.26□□□□□ -0.29
PDXDC1-214ENST00000566633 PALLDQ8WX93 1383 aa13.25□□□□□ -0.29
PDXDC1-214ENST00000566633 TSHZ3Q63HK5 1081 aa13.25□□□□□ -0.29
PDXDC1-214ENST00000566633 KLHDC4Q8TBB5 520 aa13.25□□□□□ -0.29
PDXDC1-214ENST00000566633 SSH3Q8TE77 659 aa13.25□□□□□ -0.29
PDXDC1-214ENST00000566633 UBR2Q8IWV8 1755 aa13.25□□□□□ -0.29
PDXDC1-214ENST00000566633 DOT1LQ8TEK3 1739 aa13.24□□□□□ -0.29
PDXDC1-214ENST00000566633 K7ELQ4 463 aaPredicted RBP13.24□□□□□ -0.29
PDXDC1-214ENST00000566633 GPTP24298 496 aa13.24□□□□□ -0.29
PDXDC1-214ENST00000566633 CASC1Q6TDU7 716 aa13.24□□□□□ -0.29
PDXDC1-214ENST00000566633 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
PDXDC1-214ENST00000566633 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
PDXDC1-214ENST00000566633 WNK3Q9BYP7 1800 aa13.24□□□□□ -0.29
PDXDC1-214ENST00000566633 SALL3Q9BXA9 1300 aa13.24□□□□□ -0.29
PDXDC1-214ENST00000566633 LRRCC1Q9C099 1032 aa13.24□□□□□ -0.29
PDXDC1-214ENST00000566633 N4BP2Q86UW6 1770 aaPredicted RBP13.23□□□□□ -0.29
PDXDC1-214ENST00000566633 CRKLP46109 303 aaKnown RBP13.23□□□□□ -0.29
PDXDC1-214ENST00000566633 POLA2Q14181 598 aa13.23□□□□□ -0.29
PDXDC1-214ENST00000566633 RABEP1Q15276 862 aa13.23□□□□□ -0.29
PDXDC1-214ENST00000566633 INTS5Q6P9B9 1019 aaKnown RBP13.23□□□□□ -0.29
PDXDC1-214ENST00000566633 IBTKQ9P2D0 1353 aaPredicted RBP13.22□□□□□ -0.29
PDXDC1-214ENST00000566633 KIF6Q6ZMV9 814 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms