RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 DZIP3Q86Y13 1208 aaKnown RBP27.2■■□□□ 1.94
PDXDC1-213ENST00000566426 KIF7Q2M1P5 1343 aa27.19■■□□□ 1.94
PDXDC1-213ENST00000566426 PER1O15534 1290 aaPredicted RBP27.19■■□□□ 1.94
PDXDC1-213ENST00000566426 POTEIP0CG38 1075 aa27.19■■□□□ 1.94
PDXDC1-213ENST00000566426 POTEJP0CG39 1038 aa27.19■■□□□ 1.94
PDXDC1-213ENST00000566426 LDHDQ86WU2 507 aa27.19■■□□□ 1.94
PDXDC1-213ENST00000566426 SLX4Q8IY92 1834 aa27.18■■□□□ 1.94
PDXDC1-213ENST00000566426 BTBD11A6QL63 1104 aa27.17■■□□□ 1.94
PDXDC1-213ENST00000566426 CLEC4GQ6UXB4 293 aa27.17■■□□□ 1.94
PDXDC1-213ENST00000566426 NBPF5PQ86XG9 351 aaPredicted RBP27.17■■□□□ 1.94
PDXDC1-213ENST00000566426 L3MBTL3Q96JM7 780 aaPredicted RBP27.17■■□□□ 1.94
PDXDC1-213ENST00000566426 CCDC93Q567U6 631 aa27.16■■□□□ 1.94
PDXDC1-213ENST00000566426 ZNF652Q9Y2D9 606 aa27.16■■□□□ 1.94
PDXDC1-213ENST00000566426 CNTNAP1P78357 1384 aa27.16■■□□□ 1.94
PDXDC1-213ENST00000566426 TAF1DQ9H5J8 278 aaPredicted RBP27.15■■□□□ 1.94
PDXDC1-213ENST00000566426 PASKQ96RG2 1323 aa27.15■■□□□ 1.94
PDXDC1-213ENST00000566426 CEMIPQ8WUJ3 1361 aa27.14■■□□□ 1.94
PDXDC1-213ENST00000566426 NPR1P16066 1061 aa27.14■■□□□ 1.94
PDXDC1-213ENST00000566426 SIPA1L3O60292 1781 aaPredicted RBP27.14■■□□□ 1.93
PDXDC1-213ENST00000566426 C7orf43Q8WVR3 580 aa27.13■■□□□ 1.93
PDXDC1-213ENST00000566426 AIDAQ96BJ3 306 aa27.13■■□□□ 1.93
PDXDC1-213ENST00000566426 PRDM10Q9NQV6 1147 aa27.13■■□□□ 1.93
PDXDC1-213ENST00000566426 SCN4AP35499 1836 aa27.12■■□□□ 1.93
PDXDC1-213ENST00000566426 TMEM88BA6NKF7 163 aa27.12■■□□□ 1.93
PDXDC1-213ENST00000566426 FOXN1O15353 648 aa27.12■■□□□ 1.93
PDXDC1-213ENST00000566426 USP16Q9Y5T5 823 aa27.12■■□□□ 1.93
PDXDC1-213ENST00000566426 ARFGEF2Q9Y6D5 1785 aa27.12■■□□□ 1.93
PDXDC1-213ENST00000566426 CACNA1SQ13698 1873 aa27.11■■□□□ 1.93
PDXDC1-213ENST00000566426 KCNQ3O43525 872 aa27.11■■□□□ 1.93
PDXDC1-213ENST00000566426 FKBP4Q02790 459 aaKnown RBP eCLIP27.11■■□□□ 1.93
PDXDC1-213ENST00000566426 TPTE2Q6XPS3 522 aa27.11■■□□□ 1.93
PDXDC1-213ENST00000566426 COL3A1P02461 1466 aaPredicted RBP27.11■■□□□ 1.93
PDXDC1-213ENST00000566426 CTCFP49711 727 aaPredicted RBP27.1■■□□□ 1.93
PDXDC1-213ENST00000566426 EAPPQ56P03 285 aaPredicted RBP27.1■■□□□ 1.93
PDXDC1-213ENST00000566426 RTKN2Q8IZC4 609 aa27.1■■□□□ 1.93
PDXDC1-213ENST00000566426 HACL1Q9UJ83 578 aa27.1■■□□□ 1.93
PDXDC1-213ENST00000566426 NPC1L1Q9UHC9 1359 aa27.09■■□□□ 1.93
PDXDC1-213ENST00000566426 SNRPA1P09661 255 aaKnown RBP27.09■■□□□ 1.93
PDXDC1-213ENST00000566426 CLEC11AQ9Y240 323 aa27.09■■□□□ 1.93
PDXDC1-213ENST00000566426 BCORQ6W2J9 1755 aa27.09■■□□□ 1.93
PDXDC1-213ENST00000566426 KLRG2A4D1S0 409 aaPredicted RBP27.08■■□□□ 1.93
PDXDC1-213ENST00000566426 RGL2O15211 777 aa27.08■■□□□ 1.93
PDXDC1-213ENST00000566426 ITGBL1O95965 494 aaPredicted RBP27.08■■□□□ 1.93
PDXDC1-213ENST00000566426 CCER1Q8TC90 406 aaPredicted RBP27.08■■□□□ 1.93
PDXDC1-213ENST00000566426 PIP4K2AP48426 406 aaPredicted RBP27.07■■□□□ 1.92
PDXDC1-213ENST00000566426 VEGFBP49765 207 aa27.07■■□□□ 1.92
PDXDC1-213ENST00000566426 PNMA8AQ86V59 439 aaPredicted RBP27.07■■□□□ 1.92
PDXDC1-213ENST00000566426 ZNF277Q9NRM2 450 aaPredicted RBP27.07■■□□□ 1.92
PDXDC1-213ENST00000566426 ALDH1B1P30837 517 aa27.06■■□□□ 1.92
PDXDC1-213ENST00000566426 PRKAR2BP31323 418 aa27.06■■□□□ 1.92
PDXDC1-213ENST00000566426 CNGB1Q14028 1251 aaPredicted RBP27.06■■□□□ 1.92
PDXDC1-213ENST00000566426 RTF1Q92541 710 aaKnown RBP27.06■■□□□ 1.92
PDXDC1-213ENST00000566426 PHACTR3Q96KR7 559 aa27.06■■□□□ 1.92
PDXDC1-213ENST00000566426 NIP7Q9Y221 180 aaKnown RBP eCLIP27.06■■□□□ 1.92
PDXDC1-213ENST00000566426 EPHX2P34913 555 aa27.05■■□□□ 1.92
PDXDC1-213ENST00000566426 CFAP53Q96M91 514 aa27.05■■□□□ 1.92
PDXDC1-213ENST00000566426 ZNF541Q9H0D2 1346 aa27.04■■□□□ 1.92
PDXDC1-213ENST00000566426 GTF2E1P29083 439 aaPredicted RBP27.03■■□□□ 1.92
PDXDC1-213ENST00000566426 RSPH6AQ9H0K4 717 aa27.03■■□□□ 1.92
PDXDC1-213ENST00000566426 NUDCQ9Y266 331 aa27.03■■□□□ 1.92
PDXDC1-213ENST00000566426 PRAMEF22A3QJZ6 481 aa27.02■■□□□ 1.92
PDXDC1-213ENST00000566426 IARSP41252 1262 aaKnown RBP27.02■■□□□ 1.92
PDXDC1-213ENST00000566426 WBP1LQ9NX94 342 aa27.02■■□□□ 1.92
PDXDC1-213ENST00000566426 FZD9O00144 591 aa27.01■■□□□ 1.91
PDXDC1-213ENST00000566426 DEFB115Q30KQ5 88 aa27.01■■□□□ 1.91
PDXDC1-213ENST00000566426 CNTROBQ8N137 903 aa27.01■■□□□ 1.91
PDXDC1-213ENST00000566426 SYNE4Q8N205 404 aa27.01■■□□□ 1.91
PDXDC1-213ENST00000566426 FAM177BA6PVY3 158 aa27■■□□□ 1.91
PDXDC1-213ENST00000566426 GPC2Q8N158 579 aa27■■□□□ 1.91
PDXDC1-213ENST00000566426 JDP2Q8WYK2 163 aa27■■□□□ 1.91
PDXDC1-213ENST00000566426 RNF123Q5XPI4 1314 aa26.99■■□□□ 1.91
PDXDC1-213ENST00000566426 RASSF10A6NK89 507 aa26.99■■□□□ 1.91
PDXDC1-213ENST00000566426 OLFM4Q6UX06 510 aa26.99■■□□□ 1.91
PDXDC1-213ENST00000566426 NBPF26B4DH59 902 aa26.98■■□□□ 1.91
PDXDC1-213ENST00000566426 NBPF10Q6P3W6 841 aaKnown RBP26.98■■□□□ 1.91
PDXDC1-213ENST00000566426 MCM10Q7L590 875 aa26.98■■□□□ 1.91
PDXDC1-213ENST00000566426 NBPF15Q8N660 670 aa26.98■■□□□ 1.91
PDXDC1-213ENST00000566426 LBX1P52954 281 aa26.97■■□□□ 1.91
PDXDC1-213ENST00000566426 MAP2K1Q02750 393 aaPredicted RBP26.97■■□□□ 1.91
PDXDC1-213ENST00000566426 MAP1SQ66K74 1059 aaPredicted RBP26.97■■□□□ 1.91
PDXDC1-213ENST00000566426 CC2D2BQ6DHV5 1058 aa26.97■■□□□ 1.91
PDXDC1-213ENST00000566426 PSMD1Q99460 953 aa26.97■■□□□ 1.91
PDXDC1-213ENST00000566426 NYXQ9GZU5 481 aa26.96■■□□□ 1.91
PDXDC1-213ENST00000566426 HTATSF1O43719 755 aaKnown RBP26.95■■□□□ 1.9
PDXDC1-213ENST00000566426 EIF6P56537 245 aaKnown RBP26.95■■□□□ 1.9
PDXDC1-213ENST00000566426 ABT1Q9ULW3 272 aaKnown RBP26.95■■□□□ 1.9
PDXDC1-213ENST00000566426 WDR33Q9C0J8 1336 aaKnown RBP26.94■■□□□ 1.9
PDXDC1-213ENST00000566426 U2AF1L5P0DN76 240 aaPredicted RBP26.94■■□□□ 1.9
PDXDC1-213ENST00000566426 U2AF1Q01081 240 aaKnown RBP eCLIP26.94■■□□□ 1.9
PDXDC1-213ENST00000566426 HLFQ16534 295 aa26.94■■□□□ 1.9
PDXDC1-213ENST00000566426 GRIPAP1Q4V328 841 aa26.94■■□□□ 1.9
PDXDC1-213ENST00000566426 ADAMTSL1Q8N6G6 1762 aa26.94■■□□□ 1.9
PDXDC1-213ENST00000566426 LMOD1P29536 600 aaPredicted RBP26.93■■□□□ 1.9
PDXDC1-213ENST00000566426 TAF7Q15545 349 aaPredicted RBP26.92■■□□□ 1.9
PDXDC1-213ENST00000566426 CRY2Q49AN0 593 aa26.92■■□□□ 1.9
PDXDC1-213ENST00000566426 DDX21Q9NR30 783 aaKnown RBP eCLIP26.91■■□□□ 1.9
PDXDC1-213ENST00000566426 GJA3Q9Y6H8 435 aa26.91■■□□□ 1.9
PDXDC1-213ENST00000566426 ERVV-1B6SEH8 477 aa26.9■■□□□ 1.9
PDXDC1-213ENST00000566426 HSPA8P11142 646 aaKnown RBP26.9■■□□□ 1.9
PDXDC1-213ENST00000566426 DCTN1Q14203 1278 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms