RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 ZNF652Q9Y2D9 606 aa25.04■■□□□ 1.6
SPSB3-207ENST00000565550 ANKRD31Q8N7Z5 1873 aa25.04■■□□□ 1.6
SPSB3-207ENST00000565550 GLTPD2A6NH11 291 aa25.03■■□□□ 1.6
SPSB3-207ENST00000565550 FSTL1Q12841 308 aa25.03■■□□□ 1.6
SPSB3-207ENST00000565550 NBPF5PQ86XG9 351 aaPredicted RBP25.03■■□□□ 1.6
SPSB3-207ENST00000565550 SRGNP10124 158 aa25.02■■□□□ 1.6
SPSB3-207ENST00000565550 DNAJC5GQ8N7S2 189 aa25.02■■□□□ 1.6
SPSB3-207ENST00000565550 CNKSR1Q969H4 720 aa25.02■■□□□ 1.6
SPSB3-207ENST00000565550 PRKRIP1Q9H875 184 aaPredicted RBP25.02■■□□□ 1.6
SPSB3-207ENST00000565550 STYK1Q6J9G0 422 aa25.01■■□□□ 1.59
SPSB3-207ENST00000565550 PNISRQ8TF01 805 aaKnown RBP25.01■■□□□ 1.59
SPSB3-207ENST00000565550 MYBBP1AQ9BQG0 1328 aaKnown RBP25.01■■□□□ 1.59
SPSB3-207ENST00000565550 MASTLQ96GX5 879 aa25■■□□□ 1.59
SPSB3-207ENST00000565550 NIP7Q9Y221 180 aaKnown RBP eCLIP25■■□□□ 1.59
SPSB3-207ENST00000565550 NFE2L2Q16236 605 aa24.99■■□□□ 1.59
SPSB3-207ENST00000565550 PRPF40BQ6NWY9 871 aaKnown RBP24.99■■□□□ 1.59
SPSB3-207ENST00000565550 THUMPD2Q9BTF0 503 aaKnown RBP24.99■■□□□ 1.59
SPSB3-207ENST00000565550 BCORQ6W2J9 1755 aa24.98■■□□□ 1.59
SPSB3-207ENST00000565550 VEGFAP15692 232 aaPredicted RBP24.98■■□□□ 1.59
SPSB3-207ENST00000565550 TPTE2Q6XPS3 522 aa24.98■■□□□ 1.59
SPSB3-207ENST00000565550 COL11A2P13942 1736 aaPredicted RBP24.98■■□□□ 1.59
SPSB3-207ENST00000565550 DLG5Q8TDM6 1919 aa24.97■■□□□ 1.59
SPSB3-207ENST00000565550 FAM177BA6PVY3 158 aa24.97■■□□□ 1.59
SPSB3-207ENST00000565550 RGL2O15211 777 aa24.97■■□□□ 1.59
SPSB3-207ENST00000565550 HTRA3P83110 453 aa24.97■■□□□ 1.59
SPSB3-207ENST00000565550 HLFQ16534 295 aa24.97■■□□□ 1.59
SPSB3-207ENST00000565550 ERFEQ4G0M1 354 aa24.97■■□□□ 1.59
SPSB3-207ENST00000565550 PNNQ9H307 717 aaKnown RBP24.97■■□□□ 1.59
SPSB3-207ENST00000565550 EIF4A1P60842 406 aaKnown RBP24.96■■□□□ 1.59
SPSB3-207ENST00000565550 DPY19L2Q6NUT2 758 aa24.96■■□□□ 1.59
SPSB3-207ENST00000565550 NGEFQ8N5V2 710 aa24.96■■□□□ 1.59
SPSB3-207ENST00000565550 SMC1BQ8NDV3 1235 aa24.96■■□□□ 1.59
SPSB3-207ENST00000565550 TAOK3Q9H2K8 898 aa24.96■■□□□ 1.59
SPSB3-207ENST00000565550 TNRC6CQ9HCJ0 1690 aaKnown RBP24.95■■□□□ 1.58
SPSB3-207ENST00000565550 LTBP3Q9NS15 1303 aa24.94■■□□□ 1.58
SPSB3-207ENST00000565550 MAPK8IP3Q9UPT6 1336 aa24.94■■□□□ 1.58
SPSB3-207ENST00000565550 RRP7AQ9Y3A4 280 aaKnown RBP24.94■■□□□ 1.58
SPSB3-207ENST00000565550 KLRG2A4D1S0 409 aaPredicted RBP24.93■■□□□ 1.58
SPSB3-207ENST00000565550 NPR1P16066 1061 aa24.93■■□□□ 1.58
SPSB3-207ENST00000565550 SOGA3Q5TF21 947 aa24.93■■□□□ 1.58
SPSB3-207ENST00000565550 SLX4Q8IY92 1834 aa24.93■■□□□ 1.58
SPSB3-207ENST00000565550 CCDC88AQ3V6T2 1871 aa24.92■■□□□ 1.58
SPSB3-207ENST00000565550 POTECB2RU33 542 aa24.92■■□□□ 1.58
SPSB3-207ENST00000565550 IFFO2Q5TF58 517 aa24.92■■□□□ 1.58
SPSB3-207ENST00000565550 C7orf43Q8WVR3 580 aa24.92■■□□□ 1.58
SPSB3-207ENST00000565550 GTF2E1P29083 439 aaPredicted RBP24.91■■□□□ 1.58
SPSB3-207ENST00000565550 FER1L6Q2WGJ9 1857 aa24.9■■□□□ 1.58
SPSB3-207ENST00000565550 MYL6BP14649 208 aa24.9■■□□□ 1.58
SPSB3-207ENST00000565550 TTLL7Q6ZT98 887 aa24.9■■□□□ 1.58
SPSB3-207ENST00000565550 TIAM2Q8IVF5 1701 aa24.89■■□□□ 1.58
SPSB3-207ENST00000565550 ERVV-1B6SEH8 477 aa24.89■■□□□ 1.58
SPSB3-207ENST00000565550 CCDC184Q52MB2 194 aa24.89■■□□□ 1.58
SPSB3-207ENST00000565550 KLRG1Q96E93 195 aa24.89■■□□□ 1.58
SPSB3-207ENST00000565550 MAP3K15Q6ZN16 1313 aa24.88■■□□□ 1.57
SPSB3-207ENST00000565550 RIPK4P57078 832 aa24.88■■□□□ 1.57
SPSB3-207ENST00000565550 CCDC93Q567U6 631 aa24.88■■□□□ 1.57
SPSB3-207ENST00000565550 KIF6Q6ZMV9 814 aa24.88■■□□□ 1.57
SPSB3-207ENST00000565550 WDR90Q96KV7 1748 aa24.88■■□□□ 1.57
SPSB3-207ENST00000565550 KDM3BQ7LBC6 1761 aa24.88■■□□□ 1.57
SPSB3-207ENST00000565550 TSPYL4Q9UJ04 414 aa24.87■■□□□ 1.57
SPSB3-207ENST00000565550 DDNO94850 711 aaPredicted RBP24.86■■□□□ 1.57
SPSB3-207ENST00000565550 OLFM4Q6UX06 510 aa24.86■■□□□ 1.57
SPSB3-207ENST00000565550 NUTM1Q86Y26 1132 aa24.86■■□□□ 1.57
SPSB3-207ENST00000565550 LAMB4A4D0S4 1761 aa24.85■■□□□ 1.57
SPSB3-207ENST00000565550 ALDH1B1P30837 517 aa24.85■■□□□ 1.57
SPSB3-207ENST00000565550 NYXQ9GZU5 481 aa24.85■■□□□ 1.57
SPSB3-207ENST00000565550 ZBTB3Q9H5J0 574 aa24.85■■□□□ 1.57
SPSB3-207ENST00000565550 GPTP24298 496 aa24.84■■□□□ 1.57
SPSB3-207ENST00000565550 FKBP4Q02790 459 aaKnown RBP eCLIP24.84■■□□□ 1.57
SPSB3-207ENST00000565550 CACNA1SQ13698 1873 aa24.83■■□□□ 1.57
SPSB3-207ENST00000565550 DICER1Q9UPY3 1922 aaKnown RBP24.82■■□□□ 1.56
SPSB3-207ENST00000565550 ABCC12Q96J65 1359 aa24.82■■□□□ 1.56
SPSB3-207ENST00000565550 TMPOP42166 694 aaKnown RBP24.82■■□□□ 1.56
SPSB3-207ENST00000565550 RTKN2Q8IZC4 609 aa24.82■■□□□ 1.56
SPSB3-207ENST00000565550 ZNF277Q9NRM2 450 aaPredicted RBP24.82■■□□□ 1.56
SPSB3-207ENST00000565550 ARFGEF2Q9Y6D5 1785 aa24.82■■□□□ 1.56
SPSB3-207ENST00000565550 ERBB4Q15303 1308 aa24.82■■□□□ 1.56
SPSB3-207ENST00000565550 UBN2Q6ZU65 1347 aa24.82■■□□□ 1.56
SPSB3-207ENST00000565550 ANP32CO43423 234 aa24.81■■□□□ 1.56
SPSB3-207ENST00000565550 EIF2S2P20042 333 aaKnown RBP24.81■■□□□ 1.56
SPSB3-207ENST00000565550 CRY2Q49AN0 593 aa24.81■■□□□ 1.56
SPSB3-207ENST00000565550 SUSD4Q5VX71 490 aa24.81■■□□□ 1.56
SPSB3-207ENST00000565550 JMYQ8N9B5 988 aa24.81■■□□□ 1.56
SPSB3-207ENST00000565550 ZNF34Q8IZ26 560 aa24.8■■□□□ 1.56
SPSB3-207ENST00000565550 PDIA6Q15084 440 aa24.79■■□□□ 1.56
SPSB3-207ENST00000565550 GIGYF2Q6Y7W6 1299 aaKnown RBP24.79■■□□□ 1.56
SPSB3-207ENST00000565550 CCDC146Q8IYE0 955 aa24.79■■□□□ 1.56
SPSB3-207ENST00000565550 BABAM1Q9NWV8 329 aa24.79■■□□□ 1.56
SPSB3-207ENST00000565550 POTEIP0CG38 1075 aa24.78■■□□□ 1.56
SPSB3-207ENST00000565550 POTEJP0CG39 1038 aa24.78■■□□□ 1.56
SPSB3-207ENST00000565550 LMOD3Q0VAK6 560 aa24.78■■□□□ 1.56
SPSB3-207ENST00000565550 LRP10Q7Z4F1 713 aa24.78■■□□□ 1.56
SPSB3-207ENST00000565550 SYNE4Q8N205 404 aa24.78■■□□□ 1.56
SPSB3-207ENST00000565550 NEUROD2Q15784 382 aa24.77■■□□□ 1.56
SPSB3-207ENST00000565550 CHADLQ6NUI6 762 aa24.77■■□□□ 1.56
SPSB3-207ENST00000565550 RPGRQ92834 1020 aaKnown RBP24.77■■□□□ 1.56
SPSB3-207ENST00000565550 NUP98P52948 1817 aa24.77■■□□□ 1.56
SPSB3-207ENST00000565550 NTSR2O95665 410 aa24.76■■□□□ 1.55
SPSB3-207ENST00000565550 ANXA1P04083 346 aa24.76■■□□□ 1.55
SPSB3-207ENST00000565550 IARSP41252 1262 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms