RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 G2E3Q7L622 706 aa24.18■■□□□ 1.46
CSPG4P13-201ENST00000565545 TMEM57Q8N5G2 664 aa24.18■■□□□ 1.46
CSPG4P13-201ENST00000565545 PRAMEF22A3QJZ6 481 aa24.17■■□□□ 1.46
CSPG4P13-201ENST00000565545 CCDC136Q96JN2 1154 aa24.17■■□□□ 1.46
CSPG4P13-201ENST00000565545 ASAP1Q9ULH1 1129 aa24.17■■□□□ 1.46
CSPG4P13-201ENST00000565545 INTS3Q68E01 1043 aaKnown RBP24.16■■□□□ 1.46
CSPG4P13-201ENST00000565545 ITPRIPQ8IWB1 547 aa24.16■■□□□ 1.46
CSPG4P13-201ENST00000565545 FKBP5Q13451 457 aaPredicted RBP24.15■■□□□ 1.46
CSPG4P13-201ENST00000565545 USP16Q9Y5T5 823 aa24.15■■□□□ 1.46
CSPG4P13-201ENST00000565545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.14■■□□□ 1.45
CSPG4P13-201ENST00000565545 PTCD1O75127 700 aaKnown RBP24.14■■□□□ 1.45
CSPG4P13-201ENST00000565545 SMIM5Q71RC9 77 aa24.14■■□□□ 1.45
CSPG4P13-201ENST00000565545 PXDNLA1KZ92 1463 aa24.13■■□□□ 1.45
CSPG4P13-201ENST00000565545 N4BP2Q86UW6 1770 aaPredicted RBP24.13■■□□□ 1.45
CSPG4P13-201ENST00000565545 CCT4P50991 539 aaKnown RBP24.12■■□□□ 1.45
CSPG4P13-201ENST00000565545 PDIA6Q15084 440 aa24.12■■□□□ 1.45
CSPG4P13-201ENST00000565545 B4GALNT3Q6L9W6 998 aa24.12■■□□□ 1.45
CSPG4P13-201ENST00000565545 AMIGO3Q86WK7 504 aa24.12■■□□□ 1.45
CSPG4P13-201ENST00000565545 PHAXQ9H814 394 aaKnown RBP24.12■■□□□ 1.45
CSPG4P13-201ENST00000565545 GPBP1L1Q9HC44 474 aaPredicted RBP24.12■■□□□ 1.45
CSPG4P13-201ENST00000565545 WWC3Q9ULE0 1092 aa24.12■■□□□ 1.45
CSPG4P13-201ENST00000565545 ATP10DQ9P241 1426 aa24.11■■□□□ 1.45
CSPG4P13-201ENST00000565545 LOC102724428A0A0B4J2F2 783 aa24.11■■□□□ 1.45
CSPG4P13-201ENST00000565545 SIK1P57059 783 aa24.11■■□□□ 1.45
CSPG4P13-201ENST00000565545 DDX58O95786 925 aaKnown RBP24.1■■□□□ 1.45
CSPG4P13-201ENST00000565545 ZNF526Q8TF50 670 aaPredicted RBP24.1■■□□□ 1.45
CSPG4P13-201ENST00000565545 RBM42Q9BTD8 480 aaKnown RBP24.1■■□□□ 1.45
CSPG4P13-201ENST00000565545 CICQ96RK0 1608 aaPredicted RBP24.1■■□□□ 1.45
CSPG4P13-201ENST00000565545 GOLGB1Q14789 3259 aaKnown RBP24.09■■□□□ 1.45
CSPG4P13-201ENST00000565545 STARD3NLO95772 234 aa24.09■■□□□ 1.45
CSPG4P13-201ENST00000565545 SSFA2P28290 1259 aa24.09■■□□□ 1.45
CSPG4P13-201ENST00000565545 PROSER3Q2NL68 480 aa24.09■■□□□ 1.45
CSPG4P13-201ENST00000565545 LINC00116Q8NCU8 138 aa24.09■■□□□ 1.45
CSPG4P13-201ENST00000565545 ZNF831Q5JPB2 1677 aa24.08■■□□□ 1.45
CSPG4P13-201ENST00000565545 ATP6V1AP38606 617 aa24.08■■□□□ 1.45
CSPG4P13-201ENST00000565545 ZBTB7BO15156 539 aaPredicted RBP24.07■■□□□ 1.44
CSPG4P13-201ENST00000565545 GNPATO15228 680 aa24.07■■□□□ 1.44
CSPG4P13-201ENST00000565545 ANXA1P04083 346 aa24.07■■□□□ 1.44
CSPG4P13-201ENST00000565545 ZBTB40Q9NUA8 1239 aa24.07■■□□□ 1.44
CSPG4P13-201ENST00000565545 F6X3S4 739 aa24.06■■□□□ 1.44
CSPG4P13-201ENST00000565545 KSR2Q6VAB6 950 aa24.06■■□□□ 1.44
CSPG4P13-201ENST00000565545 DNAJC10Q8IXB1 793 aa24.06■■□□□ 1.44
CSPG4P13-201ENST00000565545 C4BP0C0L5 1744 aa24.06■■□□□ 1.44
CSPG4P13-201ENST00000565545 TJP1Q07157 1748 aa24.06■■□□□ 1.44
CSPG4P13-201ENST00000565545 SLC4A10Q6U841 1118 aa24.05■■□□□ 1.44
CSPG4P13-201ENST00000565545 LRP10Q7Z4F1 713 aa24.05■■□□□ 1.44
CSPG4P13-201ENST00000565545 DNAAF4Q8WXU2 420 aa24.05■■□□□ 1.44
CSPG4P13-201ENST00000565545 PI4KAP2A4QPH2 592 aa24.04■■□□□ 1.44
CSPG4P13-201ENST00000565545 MYL6BP14649 208 aa24.04■■□□□ 1.44
CSPG4P13-201ENST00000565545 ITPK1Q13572 414 aa24.04■■□□□ 1.44
CSPG4P13-201ENST00000565545 PI4KAP1Q8N8J0 262 aa24.04■■□□□ 1.44
CSPG4P13-201ENST00000565545 XAGE3Q8WTP9 111 aa24.03■■□□□ 1.44
CSPG4P13-201ENST00000565545 SLC4A9Q96Q91 983 aa24.03■■□□□ 1.44
CSPG4P13-201ENST00000565545 ADCY9O60503 1353 aa24.03■■□□□ 1.44
CSPG4P13-201ENST00000565545 NBPF26B4DH59 902 aa24.02■■□□□ 1.44
CSPG4P13-201ENST00000565545 NBPF10Q6P3W6 841 aaKnown RBP24.02■■□□□ 1.44
CSPG4P13-201ENST00000565545 COPS6Q7L5N1 327 aa24.02■■□□□ 1.44
CSPG4P13-201ENST00000565545 NBPF15Q8N660 670 aa24.02■■□□□ 1.44
CSPG4P13-201ENST00000565545 TAF1LQ8IZX4 1826 aa24.01■■□□□ 1.43
CSPG4P13-201ENST00000565545 A1BGP04217 495 aa24.01■■□□□ 1.43
CSPG4P13-201ENST00000565545 CYP19A1P11511 503 aaPredicted RBP24.01■■□□□ 1.43
CSPG4P13-201ENST00000565545 IBTKQ9P2D0 1353 aaPredicted RBP24.01■■□□□ 1.43
CSPG4P13-201ENST00000565545 MMP10P09238 476 aa24■■□□□ 1.43
CSPG4P13-201ENST00000565545 ANKRD13DQ6ZTN6 518 aa24■■□□□ 1.43
CSPG4P13-201ENST00000565545 SRCIN1Q9C0H9 1055 aa24■■□□□ 1.43
CSPG4P13-201ENST00000565545 MAP3K2Q9Y2U5 619 aa24■■□□□ 1.43
CSPG4P13-201ENST00000565545 ALDH1L1O75891 902 aa23.99■■□□□ 1.43
CSPG4P13-201ENST00000565545 AIMP1Q12904 312 aaKnown RBP23.99■■□□□ 1.43
CSPG4P13-201ENST00000565545 TRAPPC3LQ5T215 181 aa23.99■■□□□ 1.43
CSPG4P13-201ENST00000565545 BEND3Q5T5X7 828 aa23.99■■□□□ 1.43
CSPG4P13-201ENST00000565545 CENPQQ7L2Z9 268 aaPredicted RBP23.99■■□□□ 1.43
CSPG4P13-201ENST00000565545 RIC3Q7Z5B4 369 aa23.99■■□□□ 1.43
CSPG4P13-201ENST00000565545 PCDHB15Q9Y5E8 787 aa23.99■■□□□ 1.43
CSPG4P13-201ENST00000565545 PLBD2Q8NHP8 589 aa23.98■■□□□ 1.43
CSPG4P13-201ENST00000565545 RWDD1Q9H446 243 aaPredicted RBP23.98■■□□□ 1.43
CSPG4P13-201ENST00000565545 RTCBQ9Y3I0 505 aaKnown RBP23.98■■□□□ 1.43
CSPG4P13-201ENST00000565545 GNAI3P08754 354 aa23.97■■□□□ 1.43
CSPG4P13-201ENST00000565545 KDM2BQ8NHM5 1336 aa23.97■■□□□ 1.43
CSPG4P13-201ENST00000565545 HSPA6P17066 643 aa23.96■■□□□ 1.43
CSPG4P13-201ENST00000565545 NEXNQ0ZGT2 675 aa23.96■■□□□ 1.43
CSPG4P13-201ENST00000565545 NLGN1Q8N2Q7 840 aa23.96■■□□□ 1.43
CSPG4P13-201ENST00000565545 LINS1Q8NG48 757 aa23.96■■□□□ 1.43
CSPG4P13-201ENST00000565545 METTL22Q9BUU2 404 aaPredicted RBP23.96■■□□□ 1.43
CSPG4P13-201ENST00000565545 ARFGEF2Q9Y6D5 1785 aa23.96■■□□□ 1.43
CSPG4P13-201ENST00000565545 COL5A3P25940 1745 aaPredicted RBP23.96■■□□□ 1.43
CSPG4P13-201ENST00000565545 IL6STP40189 918 aaPredicted RBP23.95■■□□□ 1.42
CSPG4P13-201ENST00000565545 PIP4K2AP48426 406 aaPredicted RBP23.95■■□□□ 1.42
CSPG4P13-201ENST00000565545 UBR3Q6ZT12 1888 aa23.94■■□□□ 1.42
CSPG4P13-201ENST00000565545 HDAC1Q13547 482 aaPredicted RBP23.94■■□□□ 1.42
CSPG4P13-201ENST00000565545 IFFO2Q5TF58 517 aa23.94■■□□□ 1.42
CSPG4P13-201ENST00000565545 HDAC5Q9UQL6 1122 aa23.94■■□□□ 1.42
CSPG4P13-201ENST00000565545 MEIS3Q99687 375 aa23.93■■□□□ 1.42
CSPG4P13-201ENST00000565545 CCDC87Q9NVE4 849 aa23.93■■□□□ 1.42
CSPG4P13-201ENST00000565545 BCS1LQ9Y276 419 aa23.93■■□□□ 1.42
CSPG4P13-201ENST00000565545 A0A0G2JLW4 131 aa23.92■■□□□ 1.42
CSPG4P13-201ENST00000565545 TGFB2P61812 414 aa23.92■■□□□ 1.42
CSPG4P13-201ENST00000565545 NPM2Q86SE8 214 aaKnown RBP23.92■■□□□ 1.42
CSPG4P13-201ENST00000565545 RPAP2Q8IXW5 612 aaPredicted RBP23.92■■□□□ 1.42
CSPG4P13-201ENST00000565545 GNAI2P04899 355 aa23.91■■□□□ 1.42
CSPG4P13-201ENST00000565545 RFC4P35249 363 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms