RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
GTF3C1-205ENST00000564747 ZMYND15Q9H091 742 aa18.63■□□□□ 0.57
GTF3C1-205ENST00000564747 DBF4Q9UBU7 674 aaPredicted RBP18.63■□□□□ 0.57
GTF3C1-205ENST00000564747 USP42Q9H9J4 1324 aaKnown RBP18.63■□□□□ 0.57
GTF3C1-205ENST00000564747 MED1Q15648 1581 aaPredicted RBP18.63■□□□□ 0.57
GTF3C1-205ENST00000564747 LARGE1O95461 756 aa18.63■□□□□ 0.57
GTF3C1-205ENST00000564747 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
GTF3C1-205ENST00000564747 STX6O43752 255 aa18.62■□□□□ 0.57
GTF3C1-205ENST00000564747 PSME1Q06323 249 aa18.62■□□□□ 0.57
GTF3C1-205ENST00000564747 CWF19L2Q2TBE0 894 aaKnown RBP18.62■□□□□ 0.57
GTF3C1-205ENST00000564747 MTX1Q13505 466 aa18.62■□□□□ 0.57
GTF3C1-205ENST00000564747 ADCK5Q3MIX3 580 aa18.62■□□□□ 0.57
GTF3C1-205ENST00000564747 CHMP4AQ9BY43 222 aa18.62■□□□□ 0.57
GTF3C1-205ENST00000564747 PDCL3Q9H2J4 239 aa18.62■□□□□ 0.57
GTF3C1-205ENST00000564747 CCDC39Q9UFE4 941 aa18.62■□□□□ 0.57
GTF3C1-205ENST00000564747 HYPKQ9NX55 129 aa18.61■□□□□ 0.57
GTF3C1-205ENST00000564747 SMC3Q9UQE7 1217 aa18.61■□□□□ 0.57
GTF3C1-205ENST00000564747 R3HCC1Q9Y3T6 440 aaKnown RBP18.61■□□□□ 0.57
GTF3C1-205ENST00000564747 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.61■□□□□ 0.57
GTF3C1-205ENST00000564747 KDM3BQ7LBC6 1761 aa18.61■□□□□ 0.57
GTF3C1-205ENST00000564747 PLEKHO1Q53GL0 409 aaPredicted RBP18.61■□□□□ 0.57
GTF3C1-205ENST00000564747 ESCO1Q5FWF5 840 aa18.61■□□□□ 0.57
GTF3C1-205ENST00000564747 PRPF40BQ6NWY9 871 aaKnown RBP18.61■□□□□ 0.57
GTF3C1-205ENST00000564747 ECHDC1Q9NTX5 307 aa18.61■□□□□ 0.57
GTF3C1-205ENST00000564747 NFAT5O94916 1531 aa18.6■□□□□ 0.57
GTF3C1-205ENST00000564747 PHF14O94880 888 aa18.6■□□□□ 0.57
GTF3C1-205ENST00000564747 TMEM87AQ8NBN3 555 aa18.6■□□□□ 0.57
GTF3C1-205ENST00000564747 DDX54Q8TDD1 881 aaKnown RBP18.6■□□□□ 0.57
GTF3C1-205ENST00000564747 RNMTO43148 476 aaKnown RBP18.6■□□□□ 0.57
GTF3C1-205ENST00000564747 RGPD2P0DJD1 1756 aa18.6■□□□□ 0.57
GTF3C1-205ENST00000564747 GIGYF1O75420 1035 aaPredicted RBP18.59■□□□□ 0.57
GTF3C1-205ENST00000564747 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
GTF3C1-205ENST00000564747 CCDC83Q8IWF9 413 aa18.59■□□□□ 0.57
GTF3C1-205ENST00000564747 RUFY2Q8WXA3 655 aa18.59■□□□□ 0.57
GTF3C1-205ENST00000564747 JAKMIP1Q96N16 626 aaKnown RBP18.59■□□□□ 0.57
GTF3C1-205ENST00000564747 KSR2Q6VAB6 950 aa18.59■□□□□ 0.57
GTF3C1-205ENST00000564747 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.59■□□□□ 0.57
GTF3C1-205ENST00000564747 F13A1P00488 732 aa18.59■□□□□ 0.57
GTF3C1-205ENST00000564747 KCNH5Q8NCM2 988 aa18.59■□□□□ 0.57
GTF3C1-205ENST00000564747 PDRG1Q9NUG6 133 aa18.59■□□□□ 0.57
GTF3C1-205ENST00000564747 ALDH1L1O75891 902 aa18.58■□□□□ 0.56
GTF3C1-205ENST00000564747 MCM5P33992 734 aa18.58■□□□□ 0.56
GTF3C1-205ENST00000564747 TERF1P54274 439 aa18.58■□□□□ 0.56
GTF3C1-205ENST00000564747 AACSQ86V21 672 aa18.58■□□□□ 0.56
GTF3C1-205ENST00000564747 GJB2P29033 226 aa18.58■□□□□ 0.56
GTF3C1-205ENST00000564747 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.56
GTF3C1-205ENST00000564747 FIBPO43427 364 aa18.57■□□□□ 0.56
GTF3C1-205ENST00000564747 PTMAP06454 111 aaKnown RBP18.57■□□□□ 0.56
GTF3C1-205ENST00000564747 CCDC183Q5T5S1 534 aa18.57■□□□□ 0.56
GTF3C1-205ENST00000564747 CRYBG1Q9Y4K1 1723 aa18.57■□□□□ 0.56
GTF3C1-205ENST00000564747 PXDNQ92626 1479 aa18.57■□□□□ 0.56
GTF3C1-205ENST00000564747 MPNDQ8N594 471 aa18.57■□□□□ 0.56
GTF3C1-205ENST00000564747 UBE2HP62256 183 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 AMOTQ4VCS5 1084 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 VPS53Q5VIR6 699 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 GPATCH3Q96I76 525 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 ZSWIM6Q9HCJ5 1215 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 NECTIN1Q15223 517 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 EVI5LQ96CN4 794 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 SUCLG2Q96I99 432 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 FAM227BQ96M60 508 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 CYP46A1Q9Y6A2 500 aa18.56■□□□□ 0.56
GTF3C1-205ENST00000564747 SASH1O94885 1247 aa18.55■□□□□ 0.56
GTF3C1-205ENST00000564747 AIMP1Q12904 312 aaKnown RBP18.55■□□□□ 0.56
GTF3C1-205ENST00000564747 ERC1Q8IUD2 1116 aa18.55■□□□□ 0.56
GTF3C1-205ENST00000564747 CCDC8Q9H0W5 538 aaPredicted RBP18.55■□□□□ 0.56
GTF3C1-205ENST00000564747 FER1L4A9Z1Z3 1794 aa18.55■□□□□ 0.56
GTF3C1-205ENST00000564747 GCP02774 474 aa18.55■□□□□ 0.56
GTF3C1-205ENST00000564747 COL9A3Q14050 684 aaPredicted RBP18.55■□□□□ 0.56
GTF3C1-205ENST00000564747 EAF2Q96CJ1 260 aaPredicted RBP18.55■□□□□ 0.56
GTF3C1-205ENST00000564747 DNM1Q05193 864 aaKnown RBP18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 ST3GAL1Q11201 340 aa18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 NECAB1Q8N987 351 aa18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 KCNB2Q92953 911 aa18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 TM6SF1Q9BZW5 370 aa18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 BICC1Q9H694 974 aaKnown RBP18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 USP25Q9UHP3 1055 aa18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 MTMR6Q9Y217 621 aa18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 LMO7Q8WWI1 1683 aa18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 HCLS1P14317 486 aaPredicted RBP18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 ME3Q16798 604 aa18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 ATP6V1DQ9Y5K8 247 aa18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
GTF3C1-205ENST00000564747 GRM8O00222 908 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 FAM184AQ8NB25 1140 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 RBM8AQ9Y5S9 174 aaKnown RBP18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 HEG1Q9ULI3 1381 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 ARHGEF25Q86VW2 580 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 LINS1Q8NG48 757 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 ZSCAN31Q96LW9 406 aaPredicted RBP18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 TLR7Q9NYK1 1049 aaKnown RBP18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 KCNJ4P48050 445 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 G3BP1Q13283 466 aaKnown RBP eCLIP18.53■□□□□ 0.562e-6■□□□□ 11.2
GTF3C1-205ENST00000564747 NMIQ13287 307 aaPredicted RBP18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 CSPP1Q1MSJ5 1256 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 UVSSAQ2YD98 709 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 CREB3L3Q68CJ9 461 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms