RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 BCL9LQ86UU0 1499 aa7.9□□□□□ -1.14
TUBGCP4-209ENST00000564511 ZFP42Q96MM3 310 aa7.9□□□□□ -1.14
TUBGCP4-209ENST00000564511 E9PCH4 1651 aa7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 LRP5O75197 1615 aa7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 BLMP54132 1417 aaPredicted RBP7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 C1QTNF8P60827 252 aa7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 XPCQ01831 940 aaPredicted RBP7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 ESCO1Q5FWF5 840 aa7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 SH3D19Q5HYK7 790 aa7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 SH3BP5LQ7L8J4 393 aa7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 C1QTNF2Q9BXJ5 285 aa7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 NRXN3Q9Y4C0 1643 aa7.89□□□□□ -1.15
TUBGCP4-209ENST00000564511 NPHP3Q7Z494 1330 aa7.88□□□□□ -1.15
TUBGCP4-209ENST00000564511 FOXO3O43524 673 aa7.88□□□□□ -1.15
TUBGCP4-209ENST00000564511 NR3C2P08235 984 aa7.88□□□□□ -1.15
TUBGCP4-209ENST00000564511 NR5A1Q13285 461 aa7.88□□□□□ -1.15
TUBGCP4-209ENST00000564511 MRPL14Q6P1L8 145 aaKnown RBP7.88□□□□□ -1.15
TUBGCP4-209ENST00000564511 UNC5CLQ8IV45 518 aa7.88□□□□□ -1.15
TUBGCP4-209ENST00000564511 LRRN4Q8WUT4 740 aa7.88□□□□□ -1.15
TUBGCP4-209ENST00000564511 DDRGK1Q96HY6 314 aa7.88□□□□□ -1.15
TUBGCP4-209ENST00000564511 NALCNQ8IZF0 1738 aa7.87□□□□□ -1.15
TUBGCP4-209ENST00000564511 NBPF14Q5TI25 921 aa7.87□□□□□ -1.15
TUBGCP4-209ENST00000564511 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
TUBGCP4-209ENST00000564511 MYOM2P54296 1465 aa7.87□□□□□ -1.15
TUBGCP4-209ENST00000564511 ROBO2Q9HCK4 1378 aa7.86□□□□□ -1.15
TUBGCP4-209ENST00000564511 ZIC2O95409 532 aaPredicted RBP7.86□□□□□ -1.15
TUBGCP4-209ENST00000564511 ITGAEP38570 1179 aa7.86□□□□□ -1.15
TUBGCP4-209ENST00000564511 PPP2R2DQ66LE6 453 aa7.86□□□□□ -1.15
TUBGCP4-209ENST00000564511 SEPT12Q8IYM1 358 aa7.86□□□□□ -1.15
TUBGCP4-209ENST00000564511 ITPKCQ96DU7 683 aa7.86□□□□□ -1.15
TUBGCP4-209ENST00000564511 CCDC9Q9Y3X0 531 aaKnown RBP7.86□□□□□ -1.15
TUBGCP4-209ENST00000564511 LAMC1P11047 1609 aa7.85□□□□□ -1.15
TUBGCP4-209ENST00000564511 MAGEB6P1A0A0J9YX57 407 aa7.85□□□□□ -1.15
TUBGCP4-209ENST00000564511 WIPF1O43516 503 aa7.85□□□□□ -1.15
TUBGCP4-209ENST00000564511 TRMT44Q8IYL2 757 aaKnown RBP7.85□□□□□ -1.15
TUBGCP4-209ENST00000564511 GPKOWQ92917 476 aaPredicted RBP eCLIP7.85□□□□□ -1.15
TUBGCP4-209ENST00000564511 PURBQ96QR8 312 aaKnown RBP7.85□□□□□ -1.15
TUBGCP4-209ENST00000564511 NXF1Q9UBU9 619 aaKnown RBP7.85□□□□□ -1.15
TUBGCP4-209ENST00000564511 RALGAPBQ86X10 1494 aa7.85□□□□□ -1.15
TUBGCP4-209ENST00000564511 IQGAP3Q86VI3 1631 aa7.85□□□□□ -1.15
TUBGCP4-209ENST00000564511 COL22A1Q8NFW1 1626 aaPredicted RBP7.85□□□□□ -1.15
TUBGCP4-209ENST00000564511 BAG6P46379 1132 aa7.84□□□□□ -1.15
TUBGCP4-209ENST00000564511 SCARF1Q14162 830 aa7.84□□□□□ -1.15
TUBGCP4-209ENST00000564511 KRT27Q7Z3Y8 459 aa7.84□□□□□ -1.15
TUBGCP4-209ENST00000564511 MAP4K5Q9Y4K4 846 aa7.84□□□□□ -1.15
TUBGCP4-209ENST00000564511 LRPPRCP42704 1394 aaKnown RBP7.84□□□□□ -1.16
TUBGCP4-209ENST00000564511 ROCK1Q13464 1354 aa7.84□□□□□ -1.16
TUBGCP4-209ENST00000564511 NR6A1Q15406 480 aa7.83□□□□□ -1.16
TUBGCP4-209ENST00000564511 PDXDC2PQ6P474 469 aa7.83□□□□□ -1.16
TUBGCP4-209ENST00000564511 VASH1Q7L8A9 365 aaPredicted RBP7.83□□□□□ -1.16
TUBGCP4-209ENST00000564511 CARD14Q9BXL6 1004 aa7.83□□□□□ -1.16
TUBGCP4-209ENST00000564511 GLI3P10071 1580 aa7.83□□□□□ -1.16
TUBGCP4-209ENST00000564511 PXDNQ92626 1479 aa7.82□□□□□ -1.16
TUBGCP4-209ENST00000564511 HFM1A2PYH4 1435 aa7.82□□□□□ -1.16
TUBGCP4-209ENST00000564511 VEGFBP49765 207 aa7.82□□□□□ -1.16
TUBGCP4-209ENST00000564511 VPS72Q15906 364 aa7.82□□□□□ -1.16
TUBGCP4-209ENST00000564511 ERFEQ4G0M1 354 aa7.82□□□□□ -1.16
TUBGCP4-209ENST00000564511 FKBPLQ9UIM3 349 aa7.82□□□□□ -1.16
TUBGCP4-209ENST00000564511 SLIT2O94813 1529 aa7.82□□□□□ -1.16
TUBGCP4-209ENST00000564511 NEXMIFQ5QGS0 1516 aa7.82□□□□□ -1.16
TUBGCP4-209ENST00000564511 SPATA31A3Q5VYP0 1347 aa7.81□□□□□ -1.16
TUBGCP4-209ENST00000564511 SOBPA7XYQ1 873 aa7.81□□□□□ -1.16
TUBGCP4-209ENST00000564511 AP1G2O75843 785 aa7.81□□□□□ -1.16
TUBGCP4-209ENST00000564511 FSHRP23945 695 aa7.81□□□□□ -1.16
TUBGCP4-209ENST00000564511 R3HDM1Q15032 1099 aaKnown RBP7.81□□□□□ -1.16
TUBGCP4-209ENST00000564511 KRT28Q7Z3Y7 464 aa7.81□□□□□ -1.16
TUBGCP4-209ENST00000564511 SLC16A10Q8TF71 515 aa7.81□□□□□ -1.16
TUBGCP4-209ENST00000564511 STK26Q9P289 416 aa7.81□□□□□ -1.16
TUBGCP4-209ENST00000564511 C6orf118Q5T5N4 469 aa7.8□□□□□ -1.16
TUBGCP4-209ENST00000564511 WAPLQ7Z5K2 1190 aa7.8□□□□□ -1.16
TUBGCP4-209ENST00000564511 NPAS3Q8IXF0 933 aa7.8□□□□□ -1.16
TUBGCP4-209ENST00000564511 EPS8L1Q8TE68 723 aa7.8□□□□□ -1.16
TUBGCP4-209ENST00000564511 ARHGAP9Q9BRR9 750 aa7.8□□□□□ -1.16
TUBGCP4-209ENST00000564511 SPHKAPQ2M3C7 1700 aa7.8□□□□□ -1.16
TUBGCP4-209ENST00000564511 NAIPQ13075 1403 aa7.79□□□□□ -1.16
TUBGCP4-209ENST00000564511 MARF1Q9Y4F3 1742 aaKnown RBP7.79□□□□□ -1.16
TUBGCP4-209ENST00000564511 FAM182BQ5T319 152 aa7.79□□□□□ -1.16
TUBGCP4-209ENST00000564511 MEIOBQ8N635 442 aa7.79□□□□□ -1.16
TUBGCP4-209ENST00000564511 OCSTAMPQ9BR26 566 aa7.79□□□□□ -1.16
TUBGCP4-209ENST00000564511 RPGRIP1LQ68CZ1 1315 aa7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 CLTCL1P53675 1640 aa7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 FAM83GA6ND36 823 aa7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 H3BM21 787 aa7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 INSM1Q01101 510 aaPredicted RBP7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 PSME1Q06323 249 aa7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 CCDC116Q8IYX3 515 aa7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 ZNF784Q8NCA9 323 aaPredicted RBP7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 HMX1Q9NP08 348 aaPredicted RBP7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 EMILIN1Q9Y6C2 1016 aa7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 BRWD3Q6RI45 1802 aa7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 CCDC144AA2RUR9 1427 aa7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 PRAG1Q86YV5 1406 aa7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
TUBGCP4-209ENST00000564511 CDC42BPGQ6DT37 1551 aa7.77□□□□□ -1.17
TUBGCP4-209ENST00000564511 BMP2P12643 396 aa7.77□□□□□ -1.17
TUBGCP4-209ENST00000564511 GMPRP36959 345 aa7.77□□□□□ -1.17
TUBGCP4-209ENST00000564511 RFC5P40937 340 aa7.77□□□□□ -1.17
TUBGCP4-209ENST00000564511 EZH2Q15910 746 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms