RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 STK32BQ9NY57 414 aa34.41■■■■□ 3.1
SH3GL3-205ENST00000563901 PI4KAP2A4QPH2 592 aa34.41■■■■□ 3.1
SH3GL3-205ENST00000563901 PI4KAP1Q8N8J0 262 aa34.41■■■■□ 3.1
SH3GL3-205ENST00000563901 CLUAP1Q96AJ1 413 aa34.41■■■■□ 3.1
SH3GL3-205ENST00000563901 HMGB2P26583 209 aaKnown RBP34.4■■■■□ 3.1
SH3GL3-205ENST00000563901 ATF7IPQ6VMQ6 1270 aa34.4■■■■□ 3.1
SH3GL3-205ENST00000563901 KIF6Q6ZMV9 814 aa34.4■■■■□ 3.1
SH3GL3-205ENST00000563901 TRAPPC3LQ5T215 181 aa34.39■■■■□ 3.1
SH3GL3-205ENST00000563901 ANKRD13DQ6ZTN6 518 aa34.39■■■■□ 3.1
SH3GL3-205ENST00000563901 SRP68Q9UHB9 627 aaKnown RBP34.39■■■■□ 3.1
SH3GL3-205ENST00000563901 MAP3K2Q9Y2U5 619 aa34.39■■■■□ 3.1
SH3GL3-205ENST00000563901 RNF123Q5XPI4 1314 aa34.38■■■■□ 3.09
SH3GL3-205ENST00000563901 SSFA2P28290 1259 aa34.38■■■■□ 3.09
SH3GL3-205ENST00000563901 C20orf194Q5TEA3 1177 aa34.38■■■■□ 3.09
SH3GL3-205ENST00000563901 MAP3K15Q6ZN16 1313 aa34.38■■■■□ 3.09
SH3GL3-205ENST00000563901 PNPLA7Q6ZV29 1317 aa34.38■■■■□ 3.09
SH3GL3-205ENST00000563901 IPO8O15397 1037 aaKnown RBP34.37■■■■□ 3.09
SH3GL3-205ENST00000563901 KSR2Q6VAB6 950 aa34.37■■■■□ 3.09
SH3GL3-205ENST00000563901 RIC3Q7Z5B4 369 aa34.37■■■■□ 3.09
SH3GL3-205ENST00000563901 DDX58O95786 925 aaKnown RBP34.37■■■■□ 3.09
SH3GL3-205ENST00000563901 HLFQ16534 295 aa34.37■■■■□ 3.09
SH3GL3-205ENST00000563901 PLBD2Q8NHP8 589 aa34.37■■■■□ 3.09
SH3GL3-205ENST00000563901 ARHGAP45Q92619 1136 aa34.37■■■■□ 3.09
SH3GL3-205ENST00000563901 ANKRD36CQ5JPF3 1778 aa34.36■■■■□ 3.09
SH3GL3-205ENST00000563901 A0A087WZG4 1122 aa34.36■■■■□ 3.09
SH3GL3-205ENST00000563901 CAMTA2O94983 1202 aa34.36■■■■□ 3.09
SH3GL3-205ENST00000563901 COL23A1Q86Y22 540 aaPredicted RBP34.36■■■■□ 3.09
SH3GL3-205ENST00000563901 N4BP2Q86UW6 1770 aaPredicted RBP34.35■■■■□ 3.09
SH3GL3-205ENST00000563901 RLBP1P12271 317 aa34.35■■■■□ 3.09
SH3GL3-205ENST00000563901 API5Q9BZZ5 524 aaKnown RBP34.35■■■■□ 3.09
SH3GL3-205ENST00000563901 ADRA2BP18089 450 aa34.34■■■■□ 3.09
SH3GL3-205ENST00000563901 RFC4P35249 363 aa34.34■■■■□ 3.09
SH3GL3-205ENST00000563901 SLC4A10Q6U841 1118 aa34.34■■■■□ 3.09
SH3GL3-205ENST00000563901 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.34■■■■□ 3.09
SH3GL3-205ENST00000563901 PANK1Q8TE04 598 aa34.34■■■■□ 3.09
SH3GL3-205ENST00000563901 AFDNP55196 1824 aaKnown RBP34.34■■■■□ 3.09
SH3GL3-205ENST00000563901 USPL1Q5W0Q7 1092 aa34.33■■■■□ 3.09
SH3GL3-205ENST00000563901 DNAAF4Q8WXU2 420 aa34.33■■■■□ 3.09
SH3GL3-205ENST00000563901 NARFQ9UHQ1 456 aa34.33■■■■□ 3.09
SH3GL3-205ENST00000563901 USP42Q9H9J4 1324 aaKnown RBP34.32■■■■□ 3.09
SH3GL3-205ENST00000563901 MSH5O43196 834 aa34.32■■■■□ 3.08
SH3GL3-205ENST00000563901 ABCC4O15439 1325 aa34.32■■■■□ 3.08
SH3GL3-205ENST00000563901 PDGFDQ9GZP0 370 aaPredicted RBP34.31■■■■□ 3.08
SH3GL3-205ENST00000563901 BCL2L12Q9HB09 334 aa34.31■■■■□ 3.08
SH3GL3-205ENST00000563901 ZPR1O75312 459 aa34.3■■■■□ 3.08
SH3GL3-205ENST00000563901 IRX6P78412 446 aaPredicted RBP34.3■■■■□ 3.08
SH3GL3-205ENST00000563901 DZIP1LQ8IYY4 767 aaKnown RBP34.3■■■■□ 3.08
SH3GL3-205ENST00000563901 MYD88Q99836 296 aa34.3■■■■□ 3.08
SH3GL3-205ENST00000563901 ERVV-1B6SEH8 477 aa34.29■■■■□ 3.08
SH3GL3-205ENST00000563901 FTSJ3Q8IY81 847 aaKnown RBP34.29■■■■□ 3.08
SH3GL3-205ENST00000563901 METTL22Q9BUU2 404 aaPredicted RBP34.28■■■■□ 3.08
SH3GL3-205ENST00000563901 GIGYF2Q6Y7W6 1299 aaKnown RBP34.27■■■■□ 3.08
SH3GL3-205ENST00000563901 TMEM57Q8N5G2 664 aa34.27■■■■□ 3.08
SH3GL3-205ENST00000563901 PXDNLA1KZ92 1463 aa34.27■■■■□ 3.08
SH3GL3-205ENST00000563901 ATP5J2-PTCD1G3V325 749 aa34.26■■■■□ 3.08
SH3GL3-205ENST00000563901 R3HDM1Q15032 1099 aaKnown RBP34.25■■■■□ 3.07
SH3GL3-205ENST00000563901 CWF19L2Q2TBE0 894 aaKnown RBP34.25■■■■□ 3.07
SH3GL3-205ENST00000563901 FLAD1Q8NFF5 587 aa34.25■■■■□ 3.07
SH3GL3-205ENST00000563901 IGKV5-2P06315 115 aa34.24■■■■□ 3.07
SH3GL3-205ENST00000563901 GPTP24298 496 aa34.24■■■■□ 3.07
SH3GL3-205ENST00000563901 FKBP8Q14318 412 aa34.24■■■■□ 3.07
SH3GL3-205ENST00000563901 BEND3Q5T5X7 828 aa34.24■■■■□ 3.07
SH3GL3-205ENST00000563901 GYS1P13807 737 aa34.23■■■■□ 3.07
SH3GL3-205ENST00000563901 CASZ1Q86V15 1759 aa34.23■■■■□ 3.07
SH3GL3-205ENST00000563901 TCIRG1Q13488 830 aa34.22■■■■□ 3.07
SH3GL3-205ENST00000563901 COG6Q9Y2V7 657 aa34.22■■■■□ 3.07
SH3GL3-205ENST00000563901 ATP10DQ9P241 1426 aa34.22■■■■□ 3.07
SH3GL3-205ENST00000563901 PDE3AQ14432 1141 aa34.22■■■■□ 3.07
SH3GL3-205ENST00000563901 PSDA5PKW4 1024 aaPredicted RBP34.21■■■■□ 3.07
SH3GL3-205ENST00000563901 TBC1D9BQ66K14 1250 aa34.21■■■■□ 3.07
SH3GL3-205ENST00000563901 ZNF652Q9Y2D9 606 aa34.21■■■■□ 3.07
SH3GL3-205ENST00000563901 NEXNQ0ZGT2 675 aa34.2■■■■□ 3.07
SH3GL3-205ENST00000563901 BICDL1Q6ZP65 573 aa34.2■■■■□ 3.07
SH3GL3-205ENST00000563901 UBN2Q6ZU65 1347 aa34.19■■■■□ 3.06
SH3GL3-205ENST00000563901 INTS3Q68E01 1043 aaKnown RBP34.19■■■■□ 3.06
SH3GL3-205ENST00000563901 ITPRIPQ8IWB1 547 aa34.19■■■■□ 3.06
SH3GL3-205ENST00000563901 ISCA1Q9BUE6 129 aa34.19■■■■□ 3.06
SH3GL3-205ENST00000563901 SRCIN1Q9C0H9 1055 aa34.19■■■■□ 3.06
SH3GL3-205ENST00000563901 MSL1Q68DK7 614 aa34.19■■■■□ 3.06
SH3GL3-205ENST00000563901 CLEC4GQ6UXB4 293 aa34.19■■■■□ 3.06
SH3GL3-205ENST00000563901 NEURL1BA8MQ27 555 aa34.18■■■■□ 3.06
SH3GL3-205ENST00000563901 SOCS7O14512 581 aa34.18■■■■□ 3.06
SH3GL3-205ENST00000563901 MS4A1P11836 297 aa34.18■■■■□ 3.06
SH3GL3-205ENST00000563901 ZNF34Q8IZ26 560 aa34.18■■■■□ 3.06
SH3GL3-205ENST00000563901 LINS1Q8NG48 757 aa34.18■■■■□ 3.06
SH3GL3-205ENST00000563901 NIP7Q9Y221 180 aaKnown RBP eCLIP34.18■■■■□ 3.06
SH3GL3-205ENST00000563901 COL24A1Q17RW2 1714 aa34.18■■■■□ 3.06
SH3GL3-205ENST00000563901 CCT4P50991 539 aaKnown RBP34.17■■■■□ 3.06
SH3GL3-205ENST00000563901 HSP90AB3PQ58FF7 597 aa34.17■■■■□ 3.06
SH3GL3-205ENST00000563901 CRBNQ96SW2 442 aa34.17■■■■□ 3.06
SH3GL3-205ENST00000563901 MVPQ14764 893 aaKnown RBP34.15■■■■□ 3.06
SH3GL3-205ENST00000563901 FAM177BA6PVY3 158 aa34.14■■■■□ 3.06
SH3GL3-205ENST00000563901 NLRP10Q86W26 655 aa34.14■■■■□ 3.06
SH3GL3-205ENST00000563901 RGL2O15211 777 aa34.13■■■■□ 3.05
SH3GL3-205ENST00000563901 NFIXQ14938 502 aa34.13■■■■□ 3.05
SH3GL3-205ENST00000563901 JARID2Q92833 1246 aaPredicted RBP34.13■■■■□ 3.05
SH3GL3-205ENST00000563901 ALDH1L1O75891 902 aa34.12■■■■□ 3.05
SH3GL3-205ENST00000563901 CWC25Q9NXE8 425 aaPredicted RBP34.12■■■■□ 3.05
SH3GL3-205ENST00000563901 GCKRQ14397 625 aa34.11■■■■□ 3.05
SH3GL3-205ENST00000563901 SUSD4Q5VX71 490 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms