RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 DIXDC1Q155Q3 683 aa10.56□□□□□ -0.72
TCF4-221ENST00000563888 SH3D19Q5HYK7 790 aa10.56□□□□□ -0.72
TCF4-221ENST00000563888 SULF1Q8IWU6 871 aa10.56□□□□□ -0.72
TCF4-221ENST00000563888 NHSQ6T4R5 1651 aa10.56□□□□□ -0.72
TCF4-221ENST00000563888 ADGRB1O14514 1584 aa10.56□□□□□ -0.72
TCF4-221ENST00000563888 PBX2P40425 430 aa10.55□□□□□ -0.72
TCF4-221ENST00000563888 SKIV2LQ15477 1246 aaKnown RBP10.55□□□□□ -0.72
TCF4-221ENST00000563888 PROX2Q3B8N5 592 aa10.55□□□□□ -0.72
TCF4-221ENST00000563888 CABP1Q9NZU7 370 aa10.55□□□□□ -0.72
TCF4-221ENST00000563888 CPSF1Q10570 1443 aaKnown RBP10.55□□□□□ -0.72
TCF4-221ENST00000563888 WDR90Q96KV7 1748 aa10.55□□□□□ -0.72
TCF4-221ENST00000563888 ARHGAP33O14559 1287 aa10.54□□□□□ -0.72
TCF4-221ENST00000563888 SMIM5Q71RC9 77 aa10.54□□□□□ -0.72
TCF4-221ENST00000563888 KCNH5Q8NCM2 988 aa10.54□□□□□ -0.72
TCF4-221ENST00000563888 DCAF11Q8TEB1 546 aa10.54□□□□□ -0.72
TCF4-221ENST00000563888 RRAGCQ9HB90 399 aa10.54□□□□□ -0.72
TCF4-221ENST00000563888 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
TCF4-221ENST00000563888 BCS1LQ9Y276 419 aa10.54□□□□□ -0.72
TCF4-221ENST00000563888 DDX11L8A8MPP1 907 aa10.53□□□□□ -0.72
TCF4-221ENST00000563888 PSEN2P49810 448 aa10.53□□□□□ -0.72
TCF4-221ENST00000563888 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
TCF4-221ENST00000563888 BTAF1O14981 1849 aa10.53□□□□□ -0.72
TCF4-221ENST00000563888 ITSN1Q15811 1721 aa10.53□□□□□ -0.72
TCF4-221ENST00000563888 SMAPO00193 183 aa10.52□□□□□ -0.73
TCF4-221ENST00000563888 C9orf131Q5VYM1 1079 aa10.52□□□□□ -0.73
TCF4-221ENST00000563888 COL24A1Q17RW2 1714 aa10.52□□□□□ -0.73
TCF4-221ENST00000563888 KAT6BQ8WYB5 2073 aa10.51□□□□□ -0.73
TCF4-221ENST00000563888 FLAD1Q8NFF5 587 aa10.51□□□□□ -0.73
TCF4-221ENST00000563888 ZBED2Q9BTP6 218 aa10.51□□□□□ -0.73
TCF4-221ENST00000563888 ARHGEF28Q8N1W1 1705 aaKnown RBP10.5□□□□□ -0.73
TCF4-221ENST00000563888 SLIT3O75094 1523 aa10.5□□□□□ -0.73
TCF4-221ENST00000563888 ABCC6O95255 1503 aa10.5□□□□□ -0.73
TCF4-221ENST00000563888 A0A0G2JLW4 131 aa10.5□□□□□ -0.73
TCF4-221ENST00000563888 ANKRD13DQ6ZTN6 518 aa10.5□□□□□ -0.73
TCF4-221ENST00000563888 NUTM1Q86Y26 1132 aa10.5□□□□□ -0.73
TCF4-221ENST00000563888 SMC1BQ8NDV3 1235 aa10.5□□□□□ -0.73
TCF4-221ENST00000563888 TMEM134Q9H6X4 195 aa10.5□□□□□ -0.73
TCF4-221ENST00000563888 COL18A1P39060 1754 aa10.49□□□□□ -0.73
TCF4-221ENST00000563888 WNK3Q9BYP7 1800 aa10.49□□□□□ -0.73
TCF4-221ENST00000563888 C3orf80F5H4A9 247 aa10.49□□□□□ -0.73
TCF4-221ENST00000563888 SLC4A3P48751 1232 aa10.49□□□□□ -0.73
TCF4-221ENST00000563888 LSM11P83369 360 aaKnown RBP eCLIP10.49□□□□□ -0.73
TCF4-221ENST00000563888 FLIIQ13045 1269 aa10.49□□□□□ -0.73
TCF4-221ENST00000563888 RDH13Q8NBN7 331 aa10.49□□□□□ -0.73
TCF4-221ENST00000563888 ANKRD24Q8TF21 1146 aa10.49□□□□□ -0.73
TCF4-221ENST00000563888 TBC1D2Q9BYX2 928 aa10.49□□□□□ -0.73
TCF4-221ENST00000563888 KDM2BQ8NHM5 1336 aa10.49□□□□□ -0.73
TCF4-221ENST00000563888 RABGEF1Q9UJ41 708 aa10.48□□□□□ -0.73
TCF4-221ENST00000563888 USP47Q96K76 1375 aa10.48□□□□□ -0.73
TCF4-221ENST00000563888 QSER1Q2KHR3 1735 aa10.47□□□□□ -0.73
TCF4-221ENST00000563888 FOXN1O15353 648 aa10.47□□□□□ -0.73
TCF4-221ENST00000563888 MYSM1Q5VVJ2 828 aa10.47□□□□□ -0.73
TCF4-221ENST00000563888 AMIGO3Q86WK7 504 aa10.47□□□□□ -0.73
TCF4-221ENST00000563888 LTV1Q96GA3 475 aaPredicted RBP10.47□□□□□ -0.73
TCF4-221ENST00000563888 TTC21BQ7Z4L5 1316 aa10.47□□□□□ -0.73
TCF4-221ENST00000563888 ANKRD36BQ8N2N9 1353 aa10.47□□□□□ -0.73
TCF4-221ENST00000563888 TUBGCP6Q96RT7 1819 aa10.47□□□□□ -0.73
TCF4-221ENST00000563888 CD46P15529 392 aa10.46□□□□□ -0.73
TCF4-221ENST00000563888 CLK2P49760 499 aaKnown RBP10.46□□□□□ -0.73
TCF4-221ENST00000563888 MLLT1Q03111 559 aaPredicted RBP10.46□□□□□ -0.73
TCF4-221ENST00000563888 PROCA1Q8NCQ7 364 aaPredicted RBP10.46□□□□□ -0.73
TCF4-221ENST00000563888 ZMYND15Q9H091 742 aa10.46□□□□□ -0.73
TCF4-221ENST00000563888 MKRN1Q9UHC7 482 aaKnown RBP10.46□□□□□ -0.73
TCF4-221ENST00000563888 KCPQ6ZWJ8 1503 aa10.46□□□□□ -0.74
TCF4-221ENST00000563888 TRPM1Q7Z4N2 1603 aa10.46□□□□□ -0.74
TCF4-221ENST00000563888 NSD2O96028 1365 aa10.45□□□□□ -0.74
TCF4-221ENST00000563888 RNF166Q96A37 237 aaPredicted RBP10.45□□□□□ -0.74
TCF4-221ENST00000563888 SLC4A5Q9BY07 1137 aa10.45□□□□□ -0.74
TCF4-221ENST00000563888 RNF181Q9P0P0 153 aa10.45□□□□□ -0.74
TCF4-221ENST00000563888 MMP10P09238 476 aa10.44□□□□□ -0.74
TCF4-221ENST00000563888 DPEP1P16444 411 aa10.44□□□□□ -0.74
TCF4-221ENST00000563888 DMRTA1Q5VZB9 504 aa10.44□□□□□ -0.74
TCF4-221ENST00000563888 POTEEQ6S8J3 1075 aa10.44□□□□□ -0.74
TCF4-221ENST00000563888 SPIRE2Q8WWL2 714 aa10.44□□□□□ -0.74
TCF4-221ENST00000563888 ABHD8Q96I13 439 aa10.44□□□□□ -0.74
TCF4-221ENST00000563888 SEPT9Q9UHD8 586 aaPredicted RBP10.44□□□□□ -0.74
TCF4-221ENST00000563888 CCDC85CA6NKD9 419 aa10.43□□□□□ -0.74
TCF4-221ENST00000563888 TGFB2P61812 414 aa10.43□□□□□ -0.74
TCF4-221ENST00000563888 RIC3Q7Z5B4 369 aa10.43□□□□□ -0.74
TCF4-221ENST00000563888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.43□□□□□ -0.74
TCF4-221ENST00000563888 AIDAQ96BJ3 306 aa10.43□□□□□ -0.74
TCF4-221ENST00000563888 PRDM10Q9NQV6 1147 aa10.43□□□□□ -0.74
TCF4-221ENST00000563888 RGPD5Q99666 1765 aa10.43□□□□□ -0.74
TCF4-221ENST00000563888 PLEKHG2Q9H7P9 1386 aa10.42□□□□□ -0.74
TCF4-221ENST00000563888 ZCRB1Q8TBF4 217 aaKnown RBP10.42□□□□□ -0.74
TCF4-221ENST00000563888 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
TCF4-221ENST00000563888 PXDNLA1KZ92 1463 aa10.42□□□□□ -0.74
TCF4-221ENST00000563888 CENPJQ9HC77 1338 aaPredicted RBP10.41□□□□□ -0.74
TCF4-221ENST00000563888 CTCFP49711 727 aaPredicted RBP10.41□□□□□ -0.74
TCF4-221ENST00000563888 LBX1P52954 281 aa10.41□□□□□ -0.74
TCF4-221ENST00000563888 NBPF1Q3BBV0 1214 aa10.41□□□□□ -0.74
TCF4-221ENST00000563888 SWT1Q5T5J6 900 aaKnown RBP10.41□□□□□ -0.74
TCF4-221ENST00000563888 MPRIPQ6WCQ1 1025 aa10.41□□□□□ -0.74
TCF4-221ENST00000563888 VPS9D1Q9Y2B5 631 aa10.41□□□□□ -0.74
TCF4-221ENST00000563888 PIK3C2AO00443 1686 aa10.41□□□□□ -0.74
TCF4-221ENST00000563888 CICQ96RK0 1608 aaPredicted RBP10.4□□□□□ -0.74
TCF4-221ENST00000563888 TTC21AQ8NDW8 1320 aa10.4□□□□□ -0.74
TCF4-221ENST00000563888 VEGFAP15692 232 aaPredicted RBP10.4□□□□□ -0.74
TCF4-221ENST00000563888 HMGB2P26583 209 aaKnown RBP10.4□□□□□ -0.74
TCF4-221ENST00000563888 PALLDQ8WX93 1383 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms